BLASTX nr result

ID: Catharanthus23_contig00039163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039163
         (256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992291.1| hypothetical protein Salmi_Mp025 (mitochondr...   138   8e-36
ref|XP_006401946.1| hypothetical protein EUTSA_v10015648mg [Eutr...   135   6e-30
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   122   6e-26
gb|EMJ00637.1| hypothetical protein PRUPE_ppa026667mg, partial [...    72   1e-20

>ref|YP_008992291.1| hypothetical protein Salmi_Mp025 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292266|gb|AGU16558.1| hypothetical
           protein Salmi_Mp025 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 121

 Score =  138 bits (347), Expect(2) = 8e-36
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = +3

Query: 3   SVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVELRNARGWC 182
           SVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE RNAR WC
Sbjct: 9   SVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVESRNARCWC 68

Query: 183 ASCSRGKKEER 215
           ASCS+GKK ++
Sbjct: 69  ASCSQGKKSDK 79



 Score = 38.1 bits (87), Expect(2) = 8e-36
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 205 KKSDKVQFRLDCLQHGS 255
           KKSDKVQFR DCLQHGS
Sbjct: 75  KKSDKVQFRFDCLQHGS 91


>ref|XP_006401946.1| hypothetical protein EUTSA_v10015648mg [Eutrema salsugineum]
           gi|557103036|gb|ESQ43399.1| hypothetical protein
           EUTSA_v10015648mg [Eutrema salsugineum]
          Length = 72

 Score =  135 bits (340), Expect = 6e-30
 Identities = 67/72 (93%), Positives = 68/72 (94%)
 Frame = -2

Query: 249 MLQTVQSELNLVALLSFLASRKHTSRVRCVILLCFLHLTGWTVDRKRTSIRPASRRAACL 70
           MLQTV+ ELNLVALLSFLA RKHTS VRCVILLCFLHLTGWTVD KRTSIRPASRRAACL
Sbjct: 1   MLQTVKLELNLVALLSFLAGRKHTSSVRCVILLCFLHLTGWTVDWKRTSIRPASRRAACL 60

Query: 69  SCVTTLQSEWLF 34
           SCVTTLQSEWLF
Sbjct: 61  SCVTTLQSEWLF 72


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/73 (82%), Positives = 61/73 (83%)
 Frame = +3

Query: 3   SVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVELRNARGWC 182
           SVV SHSCPPRRATRSVVLSHKISTPPA WPGESK SSGQLSTQSSAKNTVE RNAR WC
Sbjct: 202 SVVFSHSCPPRRATRSVVLSHKISTPPASWPGESKLSSGQLSTQSSAKNTVESRNARCWC 261

Query: 183 ASCSRGKKEERQG 221
           ASC     E  +G
Sbjct: 262 ASCPYLGNENNRG 274


>gb|EMJ00637.1| hypothetical protein PRUPE_ppa026667mg, partial [Prunus persica]
          Length = 181

 Score = 72.0 bits (175), Expect(2) = 1e-20
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 NFDSPGQQAGGVLILCDNTTERVALLGGQLCDNTTE 2
           NF+SPGQQAGGVLILCDNTTERVALLGGQLCD+T E
Sbjct: 95  NFNSPGQQAGGVLILCDNTTERVALLGGQLCDSTPE 130



 Score = 53.5 bits (127), Expect(2) = 1e-20
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -2

Query: 240 TVQSELNLVALLSFLASRKHTSRVRCVILL 151
           TV+SELNLVALLSFLA RKHTS VRCVILL
Sbjct: 64  TVKSELNLVALLSFLAGRKHTSSVRCVILL 93


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