BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039109
         (373 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...    81   2e-13
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A...    77   2e-12
emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]    75   1e-11
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    74   2e-11
emb|CAN71170.1| hypothetical protein VITISV_022666 [Vitis vinifera]    73   3e-11
emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]    73   4e-11
emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]    73   4e-11
emb|CAN79138.1| hypothetical protein VITISV_034815 [Vitis vinifera]    73   4e-11
emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]    73   4e-11
emb|CBI18842.3| unnamed protein product [Vitis vinifera]               72   6e-11
gb|EOY20770.1| Ribonuclease H protein [Theobroma cacao]                72   8e-11
emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]    72   1e-10
emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]    72   1e-10
emb|CAN65941.1| hypothetical protein VITISV_038403 [Vitis vinifera]    72   1e-10
emb|CAN62218.1| hypothetical protein VITISV_042911 [Vitis vinifera]    71   1e-10
emb|CAN83244.1| hypothetical protein VITISV_000817 [Vitis vinifera]    71   2e-10
emb|CAN60420.1| hypothetical protein VITISV_021068 [Vitis vinifera]    71   2e-10
emb|CAN72837.1| hypothetical protein VITISV_031500 [Vitis vinifera]    71   2e-10
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    71   2e-10
emb|CAN60861.1| hypothetical protein VITISV_009889 [Vitis vinifera]    70   3e-10

>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 719

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 34/67 (50%), Positives = 50/67 (74%)
 Frame = -2

Query: 201 ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
           I +Y++QTAKLP S  E +++ N +F WG S E K++HL+NWES+C+P   GGLG+K+  
Sbjct: 351 IPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKKIHLVNWESVCKPKHRGGLGLKKTA 410

Query: 21  LMNKALL 1
            MN+A+L
Sbjct: 411 DMNQAML 417


>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 31/64 (48%), Positives = 48/64 (75%)
 Frame = -2

Query: 192 YSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLMN 13
           Y++QTAK P S  E L++LNR+F WG ++  K++HL+NW+ +CQP   G +GIK+ + MN
Sbjct: 66  YAMQTAKFPVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPKQLGDIGIKKTEDMN 125

Query: 12  KALL 1
           +A+L
Sbjct: 126 QAML 129


>emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]
          Length = 1703

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 31/67 (46%), Positives = 45/67 (67%)
 Frame = -2

Query: 201  ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
            I +Y +   K+P   ++ LE+L RDF WG     +++HLINWE +C    TGGLGI+++ 
Sbjct: 937  IPIYQLSLFKMPKLVVKRLEKLQRDFLWGGGSLERKIHLINWEVVCTQKKTGGLGIRKIV 996

Query: 21   LMNKALL 1
            L+NKALL
Sbjct: 997  LLNKALL 1003


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/67 (47%), Positives = 50/67 (74%)
 Frame = -2

Query: 201 ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
           I ++++ T  LP ST++ L++++R F WGSS   ++ HLI+W+ +C+P S GGLGI++ Q
Sbjct: 325 IPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQ 384

Query: 21  LMNKALL 1
            MNKALL
Sbjct: 385 DMNKALL 391


>emb|CAN71170.1| hypothetical protein VITISV_022666 [Vitis vinifera]
          Length = 657

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = -2

Query: 195 LYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLM 16
           +Y +   ++P S    L+++ RDF WG   E K+ HLI WE++C+  S GGLG+++L L+
Sbjct: 156 IYHMSLFRMPKSVARRLDKVQRDFLWGGGSEEKKTHLIKWEAICEDKSKGGLGLRKLVLL 215

Query: 15  NKALL 1
           NKALL
Sbjct: 216 NKALL 220


>emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]
          Length = 763

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 28/65 (43%), Positives = 44/65 (67%)
 Frame = -2

Query: 195 LYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLM 16
           +Y +   ++P   ++ LE+L RDF WG     +++HLINWE +C    +GGLGI+++ L+
Sbjct: 358 VYQLSLFRMPKLVVKRLEKLQRDFLWGGGSMERKIHLINWEVVCSQKESGGLGIRKIDLL 417

Query: 15  NKALL 1
           NKALL
Sbjct: 418 NKALL 422



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = -2

Query: 195 LYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLM 16
           LY +   ++P S    LE+L RDF W      +++HL+NWE +C     GGLG+++L  +
Sbjct: 6   LYQMSLFRMPKSVARRLEKLQRDFLWEGGNLERKVHLVNWEVVCAGKEKGGLGLRKLVPL 65

Query: 15  NKALL 1
           NKALL
Sbjct: 66  NKALL 70


>emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]
          Length = 342

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = -2

Query: 201 ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
           I +Y +   ++P S  + LE+L RDF WG  +  +++HLINWE +C     GGLGI+++ 
Sbjct: 66  IPIYQLSLFRMPKSVAKRLEKLQRDFLWGGGRMERKIHLINWEVVCTQKVKGGLGIRKID 125

Query: 21  LMNKALL 1
           L+NKALL
Sbjct: 126 LLNKALL 132


>emb|CAN79138.1| hypothetical protein VITISV_034815 [Vitis vinifera]
          Length = 1596

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = -2

Query: 201  ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
            I +Y +   ++P S  + LE+L RDF WG  +  +++HLINWE +C     GGLGI+++ 
Sbjct: 1218 IPIYQLSLFRMPKSVAKRLEKLQRDFLWGGGRMERKVHLINWEVVCTQKVNGGLGIRKID 1277

Query: 21   LMNKALL 1
            L+NKALL
Sbjct: 1278 LLNKALL 1284


>emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
          Length = 1875

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = -2

Query: 201  ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
            I +Y +   ++P S  + LE+L RDF WG  +  +++HLINWE +C     GGLGI+++ 
Sbjct: 1468 IPIYQLSLFRMPKSVAKRLEKLQRDFLWGGGRMERKIHLINWEVVCTQKVKGGLGIRKID 1527

Query: 21   LMNKALL 1
            L+NKALL
Sbjct: 1528 LLNKALL 1534


>emb|CBI18842.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 28/65 (43%), Positives = 44/65 (67%)
 Frame = -2

Query: 195 LYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLM 16
           +Y +   ++P   ++ LE+L RDF WG     +++HLINWE +C    +GGLGI+++ L+
Sbjct: 84  IYQLSFFRMPKLVVKRLEKLQRDFLWGGGSMERKIHLINWEVVCTQKESGGLGIRKIDLL 143

Query: 15  NKALL 1
           NKALL
Sbjct: 144 NKALL 148


>gb|EOY20770.1| Ribonuclease H protein [Theobroma cacao]
          Length = 370

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 29/62 (46%), Positives = 45/62 (72%)
 Frame = -2

Query: 186 IQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLMNKA 7
           +Q   +P S  +++ERL R+F WGS +  +++HLI WE LC+P   GG+GI++L+LMN+A
Sbjct: 1   MQVMPMPLSICQKIERLCRNFLWGSDESHRKIHLIKWEQLCRPKDEGGMGIRKLKLMNEA 60

Query: 6   LL 1
            L
Sbjct: 61  FL 62


>emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]
          Length = 1416

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = -2

Query: 201  ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
            I +Y +   ++P S ++ LE+L RDF WG     +++HL+NW+ +C     GGLGI+++ 
Sbjct: 1184 IPIYQMSIFRMPKSVVKRLEKLQRDFLWGGGNTGRKIHLVNWKVVCTQKDKGGLGIRRMG 1243

Query: 21   LMNKALL 1
            L+NKALL
Sbjct: 1244 LLNKALL 1250


>emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
          Length = 2009

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = -2

Query: 201  ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
            I +Y +   ++P S ++ LE+L RDF WG     +++HL+NW+ +C     GGLGI+++ 
Sbjct: 1712 IPIYQMSIFRMPKSVVKRLEKLQRDFLWGGGNTGRKIHLVNWKVVCTQKDKGGLGIRRMG 1771

Query: 21   LMNKALL 1
            L+NKALL
Sbjct: 1772 LLNKALL 1778


>emb|CAN65941.1| hypothetical protein VITISV_038403 [Vitis vinifera]
          Length = 599

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = -2

Query: 195 LYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLM 16
           LY +   ++P      LE+L RDF WG S   K++HL+NWE +C     GGLG+++L L+
Sbjct: 495 LYQMSLFRMPKIVARRLEKLQRDFLWGGSNLEKKVHLVNWEVVCADKEKGGLGLRKLALL 554

Query: 15  NKALL 1
           NKALL
Sbjct: 555 NKALL 559


>emb|CAN62218.1| hypothetical protein VITISV_042911 [Vitis vinifera]
          Length = 598

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = -2

Query: 201 ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
           +L+Y++   ++P S ++ LE+L RDF WG     +++HLINWE +C     GGLGI+++ 
Sbjct: 372 LLIYNMSLFRMPKSVVKRLEKLQRDFLWGGGSLERKVHLINWEVVCTRREKGGLGIRKID 431

Query: 21  LMNKALL 1
            +NK LL
Sbjct: 432 SLNKXLL 438


>emb|CAN83244.1| hypothetical protein VITISV_000817 [Vitis vinifera]
          Length = 563

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = -2

Query: 195 LYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLM 16
           LY +   ++P +    LE+L RDF WG     K+ HL+NWE +C     GGLG+++L L+
Sbjct: 404 LYQMSLFRMPKTVARRLEKLQRDFLWGGGNLEKKAHLVNWEVVCADKENGGLGLRKLALL 463

Query: 15  NKALL 1
           NKALL
Sbjct: 464 NKALL 468


>emb|CAN60420.1| hypothetical protein VITISV_021068 [Vitis vinifera]
          Length = 251

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 29/67 (43%), Positives = 44/67 (65%)
 Frame = -2

Query: 201 ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
           I +Y +   ++P    + LE+L RDF WG  +  +++HLINWE +C     GGLGI+++ 
Sbjct: 155 IPIYQLSLFQMPRLVAKRLEKLQRDFLWGGGRMERKIHLINWEVVCTQKENGGLGIRKID 214

Query: 21  LMNKALL 1
           L+NKALL
Sbjct: 215 LLNKALL 221


>emb|CAN72837.1| hypothetical protein VITISV_031500 [Vitis vinifera]
          Length = 982

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = -2

Query: 192 YSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQLMN 13
           Y +   K+P+S   ++ERL RDF W    E KR HL+ WE++C+P S GGLGI ++ L N
Sbjct: 562 YFLSLFKIPASVAAKIERLQRDFLWSGVGEGKRDHLVRWEAVCKPRSIGGLGIGKIPLRN 621

Query: 12  KALL 1
           +ALL
Sbjct: 622 RALL 625


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = -2

Query: 201 ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
           I ++++ T  LP ST+E L++L R F  GSS E K+LHL+ W+ +C P S GGLGI+  +
Sbjct: 477 IPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPKSEGGLGIRTSK 536

Query: 21  LMNKALL 1
            MNKAL+
Sbjct: 537 CMNKALV 543


>emb|CAN60861.1| hypothetical protein VITISV_009889 [Vitis vinifera]
          Length = 1300

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -2

Query: 201  ILLYSIQTAKLPSSTIEELERLNRDFFWGSSQETKRLHLINWESLCQPTSTGGLGIKQLQ 22
            I +Y +   ++P      LE+L RDF WG  +  +++HLINWE +C     GGLGI+++ 
Sbjct: 1108 IPIYQLSLFRMPKIVARRLEKLQRDFLWGGGRMERKIHLINWEVVCTQXEXGGLGIRKID 1167

Query: 21   LMNKALL 1
            L+NKAL+
Sbjct: 1168 LLNKALM 1174