BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00038723
         (610 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   131   1e-28
ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,...   125   9e-27
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
gb|EOX94157.1| Pentatricopeptide repeat-containing protein, puta...   124   2e-26
gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus pe...   119   9e-25
gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]     117   3e-24
ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, part...   115   1e-23
gb|EOX94627.1| Tetratricopeptide repeat-like superfamily protein...    89   1e-15
gb|ESW10507.1| hypothetical protein PHAVU_009G215500g, partial [...    88   2e-15
ref|XP_002467465.1| hypothetical protein SORBIDRAFT_01g028590 [S...    81   3e-13
ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citr...    80   4e-13
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...    80   6e-13
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]    80   6e-13
ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containi...    79   7e-13
ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]...    79   7e-13
ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containi...    79   7e-13

>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  131 bits (330), Expect = 1e-28
 Identities = 58/103 (56%), Positives = 80/103 (77%)
 Frame = +1

Query: 301 THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 480
           TH LF+ IP+ +TFAWNNLIQT+L+NG+   V S Y++MLL G +PD+ T+PR+L A+R 
Sbjct: 141 THQLFDEIPVSNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARH 200

Query: 481 LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
             + S GKQ+H H +K G SS++YV S+LLE+YG+LDG +AAK
Sbjct: 201 TSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAK 243


>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  130 bits (328), Expect = 2e-28
 Identities = 58/103 (56%), Positives = 80/103 (77%)
 Frame = +1

Query: 301 THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 480
           TH LF+ IP+ +TFAWNNLIQT+L+NG+   V S Y++MLL G +PD+ T+PR+L A+R 
Sbjct: 46  THQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARH 105

Query: 481 LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
             + S GKQ+H H +K G SS++YV S+LLE+YG+LDG +AAK
Sbjct: 106 TSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAK 148


>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 686

 Score =  125 bits (314), Expect = 9e-27
 Identities = 60/96 (62%), Positives = 72/96 (75%)
 Frame = +1

Query: 322 IPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLG 501
           IPL DTFAWNNLI ++L+N +P    S+Y  MLL GA PDRRT PRVL ASR+  NL LG
Sbjct: 57  IPLSDTFAWNNLIHSHLTNRDPFSALSIYLHMLLRGALPDRRTFPRVLNASRLSTNLFLG 116

Query: 502 KQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           KQ+H+  +KFGFSSD YV SSL++ YG LD  DAA+
Sbjct: 117 KQIHAQALKFGFSSDPYVISSLIDFYGHLDSTDAAR 152


>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 429

 Score =  124 bits (312), Expect = 2e-26
 Identities = 57/102 (55%), Positives = 76/102 (74%)
 Frame = +1

Query: 304 HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 483
           H +F+ IP+ DTFAWNNLIQT+L+NG+  HV S Y++ML  G +PD+ TLPR++ A+R  
Sbjct: 13  HQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQY 72

Query: 484 RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
            +L +GKQLH+   K GFSS+ YV +SL+ELYG LD  D AK
Sbjct: 73  GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAK 114


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  124 bits (312), Expect = 2e-26
 Identities = 57/102 (55%), Positives = 76/102 (74%)
 Frame = +1

Query: 304 HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 483
           H +F+ IP+ DTFAWNNLIQT+L+NG+  HV S Y++ML  G +PD+ TLPR++ A+R  
Sbjct: 13  HQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQY 72

Query: 484 RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
            +L +GKQLH+   K GFSS+ YV +SL+ELYG LD  D AK
Sbjct: 73  GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAK 114


>gb|EOX94157.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 656

 Score =  124 bits (311), Expect = 2e-26
 Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
 Frame = +1

Query: 301 THHLFEGIPLK--DTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAAS 474
           TH L   IPL   +TFAWN LIQT+LSN +   V SVY  M+L G +PD+ TLPRVL AS
Sbjct: 38  THQLVLEIPLSTSNTFAWNQLIQTHLSNKQLQQVLSVYHGMMLRGVRPDKHTLPRVLTAS 97

Query: 475 RILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           R+  NL+ GKQ+H+H  K GFSSD YV ++L+E+YG+L G+DAAK
Sbjct: 98  RLCTNLAFGKQVHAHAFKLGFSSDLYVITALMEMYGRLHGVDAAK 142



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 28/109 (25%), Positives = 58/109 (53%)
 Frame = +1

Query: 280 DKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPR 459
           D L + ++   F+ +P KD  +W  +I+ Y+  G       +++RM+  G KPD  T+  
Sbjct: 237 DSLEEARS--FFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISS 294

Query: 460 VLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAA 606
           +L A   +     GK+LH+++ + G   +  V ++++++Y +   I+ A
Sbjct: 295 ILPACARVPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELA 343


>gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus persica]
          Length = 654

 Score =  119 bits (297), Expect = 9e-25
 Identities = 56/103 (54%), Positives = 73/103 (70%)
 Frame = +1

Query: 301 THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 480
           T  L E +P  DTFAWN LIQT+++N    +  S Y +MLL G +PDR TLPR+L+ASR+
Sbjct: 39  TRKLLEKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRL 98

Query: 481 LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
             +L LGKQLH H +K G S D YV ++L+ELYG+L  +DAAK
Sbjct: 99  SVDLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAK 141


>gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]
          Length = 676

 Score =  117 bits (292), Expect = 3e-24
 Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
 Frame = +1

Query: 175 HSFFSTFLESPTLFQNSGI-----ASNHYFSCCKCSSQMSDKLTQTKTHHLFEGIPLKDT 339
           H+ F     S T F    +      S H  S  + + + +D    +  H +F+ + L DT
Sbjct: 13  HNMFDEMPLSETTFPKRNLLHCKLGSRHLASNPRVALKSADL---SPAHKMFDEMSLSDT 69

Query: 340 FAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAA-SRILRNLSLGKQLHS 516
           FAWN+LIQ+YL++ +  HV   YQ+ML  G  PDR TLPRVLAA S +   L +GKQ+H 
Sbjct: 70  FAWNSLIQSYLTSRDLHHVLFTYQQMLRRGVCPDRHTLPRVLAAVSGLSGGLFVGKQVHG 129

Query: 517 HVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           H IK GFS D YV S+LLE+YG+LD ID AK
Sbjct: 130 HAIKLGFSHDQYVISALLEMYGKLDDIDRAK 160


>ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score =  116 bits (291), Expect = 4e-24
 Identities = 53/102 (51%), Positives = 73/102 (71%)
 Frame = +1

Query: 304 HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 483
           H  F+G+   DT+AWN LIQT+++N +  +  S Y +ML  G +PDR TLPR L+ASR+ 
Sbjct: 41  HRAFDGMSHSDTYAWNKLIQTHIANNDFHYAVSTYDQMLHRGVRPDRHTLPRALSASRLS 100

Query: 484 RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
            +LSLGKQLH H +KFG ++D YV ++L+ELYG+L   D AK
Sbjct: 101 DDLSLGKQLHCHAVKFGCANDRYVIAALIELYGRLQSADTAK 142


>ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, partial [Populus
           trichocarpa] gi|550343274|gb|EEE78717.2| hypothetical
           protein POPTR_0003s15840g, partial [Populus trichocarpa]
          Length = 566

 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/91 (60%), Positives = 68/91 (74%)
 Frame = +1

Query: 337 TFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQLHS 516
           TFAWNNLI T+LSN +P    S+Y  M++ GA PDRRTLPRVL ASRI  +L LGKQLH 
Sbjct: 34  TFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRTLPRVLTASRICGDLFLGKQLHG 93

Query: 517 HVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
             IK GF  + YV ++L+E+YG+LDGI+A K
Sbjct: 94  QAIKLGFFDEHYVITALIEIYGRLDGIEAGK 124


>gb|EOX94627.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 966

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
 Frame = +1

Query: 76  STGEAISNRPTTYYYSQLPMAVNTFS-SQSIQKHHSFFSTFLESPTLFQNSGIASNHYFS 252
           S   + ++ P   Y   L +  N  + SQ +Q H     ++  S ++F  + +     F 
Sbjct: 78  SLSVSFNDYPDEIYAPVLELCANKKALSQGLQIHAHVIKSWSVSESVFLGTKLV----FM 133

Query: 253 CCKCSSQMSDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGA 432
             KC S  +          +F+ +  +  F WN +I  Y+SNGEP      Y++M +LG 
Sbjct: 134 YGKCGSIEN-------AEQVFDQMGQRSIFTWNAMIGAYVSNGEPLGALETYKQMRVLGV 186

Query: 433 KPDRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
             D  T P +L ASR+L+NL LG ++H   +KFG SS  +V +SL+ +Y + D +  A+
Sbjct: 187 SLDAYTFPSLLKASRLLKNLRLGTEIHGLAVKFGCSSTVFVANSLVAMYAKCDDLYGAR 245



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 33/114 (28%), Positives = 56/114 (49%)
 Frame = +1

Query: 244 YFSCCKCSSQMSDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLL 423
           Y  CCK S  +           +F  +  KD  + N+++  ++ NG        +   L 
Sbjct: 337 YVRCCKMSEAV----------RIFNELDEKDKVSRNSMLTGFIQNGMYHEAMYFFHDFLN 386

Query: 424 LGAKPDRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQ 585
            G KPD+ T+  +L A   L  L  G++LH+H IK+GF  D  V ++L+++Y +
Sbjct: 387 AGQKPDQVTIISILVACGRLGYLLNGRELHAHAIKYGFDFDLQVGNTLIDMYAK 440



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/98 (30%), Positives = 50/98 (51%)
 Frame = +1

Query: 313 FEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNL 492
           FE I  KD  +W ++I   + NG       ++  M   G +PD   L  +L+ +  L  L
Sbjct: 551 FELIKFKDVVSWTSMISACVRNGLANEALKLFHIMNKTGIQPDSVALISLLSGASNLSGL 610

Query: 493 SLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAA 606
             GK++HS VI+ GF  +  + SSL+++Y     ++ A
Sbjct: 611 KNGKEIHSFVIRKGFILEGSIASSLVDMYSHCGMVENA 648


>gb|ESW10507.1| hypothetical protein PHAVU_009G215500g, partial [Phaseolus
           vulgaris]
          Length = 570

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
 Frame = +1

Query: 157 QSIQKHHSFFS-TFLESPTLFQNSGIASNHYF--SCCKCSSQMSDKLTQTKTHHLFEGIP 327
           Q+  K HSF   T + +  L   SG+ ++ +   S      ++S    Q +T  LF+G+ 
Sbjct: 9   QACIKAHSFLQGTLIHAHVL--KSGLLADRFLANSLLSLYFKLSPHFAQART--LFDGLS 64

Query: 328 LKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQ 507
            KD  AW ++I  Y+   +PTH   ++ +ML LG +P+  TL  +L AS  L NL LGK 
Sbjct: 65  FKDVIAWTSIISGYVRKAQPTHALRLFLQMLRLGLRPNAFTLSSLLKASSQLPNLPLGKT 124

Query: 508 LHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           LH+ V   GF+S+  V+ +L+++YG+   +D A+
Sbjct: 125 LHAIVATRGFNSNCVVSCALIDMYGRTSLVDDAR 158


>ref|XP_002467465.1| hypothetical protein SORBIDRAFT_01g028590 [Sorghum bicolor]
           gi|241921319|gb|EER94463.1| hypothetical protein
           SORBIDRAFT_01g028590 [Sorghum bicolor]
          Length = 529

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/136 (28%), Positives = 76/136 (55%)
 Frame = +1

Query: 199 ESPTLFQNSGIASNHYFSCCKCSSQMSDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSN 378
           ++  LF    I   H ++   C+     +LT  +   LF+ +P ++ F+WN LI+ Y+ +
Sbjct: 246 DARNLFDEMHIKDVHMWTTVVCACAEDGQLTIAR--QLFDQMPERNAFSWNALIEGYVCH 303

Query: 379 GEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVT 558
           G+P    S++Q ++  G +PD+ TL   L+A   +R+L LG+Q+H  +++ GF     + 
Sbjct: 304 GQPMDALSMFQHLMEEGLQPDQITLGCCLSACAAMRSLKLGQQIHGMLLRCGFDQSVMII 363

Query: 559 SSLLELYGQLDGIDAA 606
           SS++++Y +   +  A
Sbjct: 364 SSIIDMYSECSFLSGA 379


>ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Citrus sinensis]
          Length = 993

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
 Frame = +1

Query: 100 RPTTYYYSQLPM-AVNTFSSQSIQKHHSFFSTFLESPTLFQNSGIASNHYFSCCKCSSQM 276
           RP   Y   L + A     SQ  Q H     +F     L+++S + +   F   KC S +
Sbjct: 112 RPDEAYALVLDLCATKKALSQGKQVHAHLIKSF----DLYESSFLETKLLFMYGKCGSVL 167

Query: 277 SDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLP 456
                      LF+ +  +  F WN ++  Y+SNGEP  V   Y RM +LG   D  T P
Sbjct: 168 D-------AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 220

Query: 457 RVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQ 585
            V+ A  +L++L  G ++H  V+K G+ S  ++ +SL+ +Y +
Sbjct: 221 CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK 263



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 31/102 (30%), Positives = 55/102 (53%)
 Frame = +1

Query: 301 THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 480
           + ++FE I  KD  +W ++I +Y+ NG       ++  M     + D  TL   L+A+  
Sbjct: 573 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 632

Query: 481 LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAA 606
           L  L  GK+L+  +I+ GF+ +  V SSL+++Y +   +D A
Sbjct: 633 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 674


>ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citrus clementina]
           gi|557546230|gb|ESR57208.1| hypothetical protein
           CICLE_v10024388mg [Citrus clementina]
          Length = 958

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
 Frame = +1

Query: 100 RPTTYYYSQLPM-AVNTFSSQSIQKHHSFFSTFLESPTLFQNSGIASNHYFSCCKCSSQM 276
           RP   Y   L + A     SQ  Q H     +F     L+++S + +   F   KC S +
Sbjct: 77  RPDEAYALVLDLCATKKALSQGKQVHAHLIKSF----DLYESSFLETKLLFMYGKCGSVL 132

Query: 277 SDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLP 456
                      LF+ +  +  F WN ++  Y+SNGEP  V   Y RM +LG   D  T P
Sbjct: 133 D-------AEQLFDKVSQRTVFTWNAMLGAYVSNGEPLRVLETYSRMRVLGISVDAFTFP 185

Query: 457 RVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQ 585
            V+ A  +L++L  G ++H  V+K G+ S  ++ +SL+ +Y +
Sbjct: 186 CVIKACAMLKDLDCGAKIHGLVLKCGYDSTDFIVNSLVAMYAK 228



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 31/102 (30%), Positives = 55/102 (53%)
 Frame = +1

Query: 301 THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 480
           + ++FE I  KD  +W ++I +Y+ NG       ++  M     + D  TL   L+A+  
Sbjct: 538 SRNVFESIESKDVVSWTSMISSYVHNGLANEALELFYLMNEANVESDSITLVSALSAASS 597

Query: 481 LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAA 606
           L  L  GK+L+  +I+ GF+ +  V SSL+++Y +   +D A
Sbjct: 598 LSILKKGKELNGFIIRKGFNLEGSVASSLVDMYARCGALDIA 639


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 34/100 (34%), Positives = 64/100 (64%)
 Frame = +1

Query: 310 LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 489
           LF+ +P +D  +WNN+I  Y  +G+P     +++ M + G KPD  TL  V+++   L +
Sbjct: 163 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222

Query: 490 LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           L  GK++H  +++ GF+ D +V+S+L+++YG+   ++ AK
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 262



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 55/100 (55%)
 Frame = +1

Query: 310 LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 489
           +FE I  K+  +WN++I  Y   G+      +++RM   G +P   TL  +L A     N
Sbjct: 264 VFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVN 323

Query: 490 LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           L LGK +H ++I+    +D +V SSL++LY +   I +A+
Sbjct: 324 LQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 363



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
 Frame = +1

Query: 100 RPTTYYYSQLPMAVNTFSSQSIQKH-HSFFSTFLESPTLFQNSGIASNHYFSCCKCSSQM 276
           RPT    S + MA +   +  + K  H +         +F NS +  + YF C    S  
Sbjct: 305 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLI-DLYFKCGNIGS-- 361

Query: 277 SDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLP 456
                     ++F+ +P  +  +WN +I  Y+  G       ++  M   G KPD  T  
Sbjct: 362 --------AENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFT 413

Query: 457 RVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAA 606
            VL A   L  L  GK++H+ +I+     +  V  +LL++Y +   +D A
Sbjct: 414 SVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEA 463


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 34/100 (34%), Positives = 64/100 (64%)
 Frame = +1

Query: 310 LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 489
           LF+ +P +D  +WNN+I  Y  +G+P     +++ M + G KPD  TL  V+++   L +
Sbjct: 355 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414

Query: 490 LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           L  GK++H  +++ GF+ D +V+S+L+++YG+   ++ AK
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 454



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 55/100 (55%)
 Frame = +1

Query: 310 LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 489
           +FE I  K+  +WN++I  Y   G+      +++RM   G +P   TL  +L A     N
Sbjct: 456 VFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVN 515

Query: 490 LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           L LGK +H ++I+    +D +V SSL++LY +   I +A+
Sbjct: 516 LQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 555



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
 Frame = +1

Query: 100 RPTTYYYSQLPMAVNTFSSQSIQKH-HSFFSTFLESPTLFQNSGIASNHYFSCCKCSSQM 276
           RPT    S + MA +   +  + K  H +         +F NS +  + YF C    S  
Sbjct: 497 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLI-DLYFKCGNIGS-- 553

Query: 277 SDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLP 456
                     ++F+ +P  +  +WN +I  Y+  G       ++  M   G KPD  T  
Sbjct: 554 --------AENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFT 605

Query: 457 RVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAA 606
            VL A   L  L  GK++H+ +I+     +  V  +LL++Y +   +D A
Sbjct: 606 SVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEA 655


>ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 524

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 36/102 (35%), Positives = 59/102 (57%)
 Frame = +1

Query: 304 HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 483
           +HLF  +P + T+ WN +I+T+  + +PT   S+Y  ML  G+ PD  T    L AS  L
Sbjct: 60  YHLFRFMPTRTTYIWNLMIRTFTDSNDPTQALSLYTNMLRTGSSPDNYTFSFALRASAAL 119

Query: 484 RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
            +L  G  +H+H I+ G+ S  +V + L+ LY   + +D+A+
Sbjct: 120 SSLYFGVMIHTHAIRLGWESYDFVQNGLVHLYVTCESMDSAR 161


>ref|NP_191896.2| RNA editing factor OTP86 [Arabidopsis thaliana]
           gi|332646951|gb|AEE80472.1| RNA editing factor OTP86
           [Arabidopsis thaliana]
          Length = 884

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 47/152 (30%), Positives = 76/152 (50%)
 Frame = +1

Query: 154 SQSIQKHHSFFSTFLESPTLFQNSGIASNHYFSCCKCSSQMSDKLTQTKTHHLFEGIPLK 333
           SQ  Q H   F TF      F+   +A    F   KC S + D         +F+ +P +
Sbjct: 97  SQGRQLHSRIFKTFPS----FELDFLAGKLVFMYGKCGS-LDD------AEKVFDEMPDR 145

Query: 334 DTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQLH 513
             FAWN +I  Y+SNGEP    ++Y  M + G      + P +L A   LR++  G +LH
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205

Query: 514 SHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           S ++K G+ S  ++ ++L+ +Y + D + AA+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 237



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/84 (33%), Positives = 48/84 (57%)
 Frame = +1

Query: 334 DTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQLH 513
           D   WN+LI+ Y+ N         +  M+  G K D  ++  ++AAS  L NL  G +LH
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409

Query: 514 SHVIKFGFSSDAYVTSSLLELYGQ 585
           ++VIK G+ S+  V ++L+++Y +
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSK 433


>ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
 Frame = +1

Query: 142 NTFSSQSIQKHHSFFSTF--LESPTLFQNSGIASNHYFSCCKCSSQMSDKLTQTKTHHLF 315
           NT S +  Q+ H+   +F  LE+ T + N+ +A+  +++ C   SQ            +F
Sbjct: 71  NTKSFKQGQQLHAHMISFSILENNT-YLNTKLAA--FYAGCGLMSQ---------AEVIF 118

Query: 316 EGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLS 495
           +GI LK++F WN +I+ Y SNG P     +Y+ ML  G + D  T P VL A   L  + 
Sbjct: 119 DGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVE 178

Query: 496 LGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           +G+++HS V+  G  SD YV +SLL +Y +   +  A+
Sbjct: 179 IGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTAR 216



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 34/118 (28%), Positives = 63/118 (53%)
 Frame = +1

Query: 256 CKCSSQMSDKLTQTKTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAK 435
           C C+  +  +        LFE +  KDT +WN++I  Y  NG+      +++RM L G+ 
Sbjct: 309 CNCNCMVDAR-------RLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSG 361

Query: 436 PDRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAK 609
           PD+ T   VL A   +  L  G  +HS+++K GF ++  V ++L+++Y +   +  ++
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSR 419