BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00038522
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   107   2e-21
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   107   2e-21
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   105   5e-21
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   105   6e-21
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   105   8e-21
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   105   8e-21
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   104   1e-20
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   103   2e-20
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   103   3e-20
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   100   2e-19
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   100   2e-19
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]   100   3e-19
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    97   3e-18
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    96   4e-18
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    96   4e-18
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    96   4e-18
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    95   8e-18
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    95   8e-18
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    92   5e-17
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    90   4e-16

>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  107 bits (267), Expect = 2e-21
 Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVRT L++A++K W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 1038 KMTTVRTFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSL 1097

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW +KL TAL+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 1098 YGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVY 1144


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L++A++K W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 755  KMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSL 814

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW SKL TAL+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 815  YGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVY 861


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L++A++K W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 1038 KMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLRKSL 1097

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW +KL TAL+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 1098 YGLKQAPRCWFAKLVTALKGYGFLQSYSNYSLFTYTKGNVQINVLVY 1144


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L++A++K W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 706  KMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLWKSL 765

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW +KL TAL+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 766  YGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVY 812


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  105 bits (261), Expect = 8e-21
 Identities = 56/107 (52%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            K+ TVRT+L+VA+AK W VH MDVHNAFLHG    EVYMR PP F              L
Sbjct: 1073 KLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSL 1132

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW SKL+TALR   F  SY  YSLF+   G+  +   +Y
Sbjct: 1133 YGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVY 1179


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
           At2g23330 [Arabidopsis thaliana]
           gi|110742535|dbj|BAE99183.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  105 bits (261), Expect = 8e-21
 Identities = 56/107 (52%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310 KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
           K+ TVRT+L+VA+AK W VH MDVHNAFLHG    EVYMR PP F              L
Sbjct: 353 KLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSL 412

Query: 142 YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
           YG +QAPRCW SKL+TALR   F  SY  YSLF+   G+  +   +Y
Sbjct: 413 YGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVY 459


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/107 (49%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310 KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
           KM  VR  L++A++K W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 676 KMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSL 735

Query: 142 YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
           YG +QAPRCW SKL TAL+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 736 YGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVY 782


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L++A++K W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 882  KMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESXDPNLVCRLRKSL 941

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW +KL T L+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 942  YGLKQAPRCWFAKLVTXLKGYGFLQSYSDYSLFTYTKGNVQINVLVY 988


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L++A++K W +H MDVHNAF HG    EVYM+ PP F              L
Sbjct: 750  KMTTVRAFLAIAASKNWELHQMDVHNAFSHGDLEEEVYMKLPPGFESSDPNLVCRLRKSL 809

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW +KL TAL+ + F  SY+ YSLFTY  GN+ +   +Y
Sbjct: 810  YGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVY 856


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  100 bits (249), Expect = 2e-19
 Identities = 53/107 (49%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHGE----VYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR LL VA+AK W +H MDVHNAFLHG+    +YM+PPP F              +
Sbjct: 1021 KMQTVRLLLDVAAAKDWELHQMDVHNAFLHGDLKEDIYMKPPPGFKTTDPSLVCKLKKSI 1080

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW  KL+T+L KF F  S   YSLFT   G+  L   +Y
Sbjct: 1081 YGLKQAPRCWFEKLSTSLLKFGFTQSKKDYSLFTSIRGSKVLHVIVY 1127


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  100 bits (249), Expect = 2e-19
 Identities = 52/107 (48%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L VA  + W +H MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 910  KMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCRLRKAL 969

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW  KLTTAL+++ F+ S A YSLFT   G++ +   +Y
Sbjct: 970  YGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILIY 1016


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 54/107 (50%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHGE----VYMRPPPEFXXXXXXXXXXXXXXL 143
            KMVTV+T L+V + K W +H MDVHNAFLHGE    VYM+  P F              L
Sbjct: 779  KMVTVQTFLAVVAMKGWELHQMDVHNAFLHGELDEEVYMQMSPGFASPTPGKVCGLRKSL 838

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG QQAP+CW +KL  AL  + FK SY  YSLFTY A +I L   +Y
Sbjct: 839  YGLQQAPKCWFAKLVAALTSYGFKQSYLDYSLFTYEAQHIQLNVLVY 885


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 52/107 (48%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L VA+A+ W VH MDVHNAFLHG    EVYM+ P  F              L
Sbjct: 1045 KMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSL 1104

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW SKL++AL+++ F  S + YSLF+Y    IF+   +Y
Sbjct: 1105 YGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVY 1151


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L VA+A+ W VH MDVHNAFLHG    EVYM+ P  F              L
Sbjct: 686  KMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSL 745

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW SKL++AL+++ F  S + YSLF+Y    +F+   +Y
Sbjct: 746  YGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVY 792


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVR  L VA+A+ W VH MDVHNAFLHG    EVYM+ P  F              L
Sbjct: 686  KMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSL 745

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW SKL++AL+++ F  S + YSLF+Y    +F+   +Y
Sbjct: 746  YGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVY 792


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            +M TVRTLL   +A +W V+ MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 1078 RMTTVRTLLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSL 1137

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW  KL+ +L +F F  SY  YSLF+Y   NI L   +Y
Sbjct: 1138 YGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLIY 1184


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 51/107 (47%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVRTLL + +A +W V+ MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 1068 KMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSL 1127

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW  KL+ AL++F F   Y  YS F+Y    I L   +Y
Sbjct: 1128 YGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVY 1174


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 51/107 (47%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVRTLL + +A +W V+ MDVHNAFLHG    EVYM+ PP F              L
Sbjct: 1068 KMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSL 1127

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW  KL+ AL++F F   Y  YS F+Y    I L   +Y
Sbjct: 1128 YGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVY 1174


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM +VR  L+V  AK+W +H MDV+NAFLHG    EVYM+ P  F              L
Sbjct: 893  KMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSL 952

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QA R W +KLTTAL+++ F+ S A YSLFTY  GNI +   +Y
Sbjct: 953  YGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVY 999


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310  KMVTVRTLLSVASAKKWPVHHMDVHNAFLHG----EVYMRPPPEFXXXXXXXXXXXXXXL 143
            KM TVRTLL + +A +W V+ MDV+NAFLHG    EVYM+ PP F              L
Sbjct: 725  KMTTVRTLLRLVAANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSL 784

Query: 142  YGFQQAPRCWVSKLTTALRKFRFK*SYAYYSLFTYYAGNIFLCTYLY 2
            YG +QAPRCW  KL+ AL +F F   +  YS F+Y    I L   +Y
Sbjct: 785  YGLKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIELRVLVY 831