BLASTX nr result

ID: Catharanthus23_contig00038331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00038331
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07

>ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/90 (37%), Positives = 54/90 (60%)
 Frame = -1

Query: 270 LKYLTVVSRYKAFIFPLQFSYSTTSTFFAGNLRLPLHQILQTLDEKCLYMKEVRQLHAQI 91
           LK+ TV+SR    +FP       + +F   N + P+HQ L  L E+C  M  ++QLHAQI
Sbjct: 5   LKHPTVISR----LFP-------SHSFHTHNFKTPIHQTLHHLLEQCSSMTHLKQLHAQI 53

Query: 90  IHNGISQHTIALSKLISFYALAKYGDIQYA 1
           I + ++   + + KLISF +++  GD++YA
Sbjct: 54  ILHRLTSENLTVGKLISFCSVSAAGDLRYA 83


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