BLASTX nr result
ID: Catharanthus23_contig00038135
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00038135
(211 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 75 9e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 75 9e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 75 9e-12
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 74 2e-11
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 70 3e-10
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 70 4e-10
gb|EMT28796.1| Ferredoxin-dependent glutamate synthase, chloropl... 69 5e-10
gb|EMS67416.1| Protein argonaute 1D [Triticum urartu] 66 5e-09
ref|XP_002527028.1| conserved hypothetical protein [Ricinus comm... 66 5e-09
gb|EMT20940.1| ABC transporter C family member 10 [Aegilops taus... 65 1e-08
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 64 2e-08
gb|EOY20770.1| Ribonuclease H protein [Theobroma cacao] 64 2e-08
gb|EOY34749.1| Uncharacterized protein TCM_042329 [Theobroma cacao] 64 3e-08
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob... 63 4e-08
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 63 4e-08
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 63 4e-08
gb|AAO34487.1| putative reverse transcriptase [Oryza sativa Japo... 62 6e-08
gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum] 62 6e-08
gb|EAZ27809.1| hypothetical protein OsJ_11756 [Oryza sativa Japo... 62 6e-08
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao] 62 8e-08
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/70 (44%), Positives = 50/70 (71%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
TVP Y+ Q++ LP ST E++ RNFLWG + + R+LH+++W +I KP +GGLG+ +
Sbjct: 1335 TVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMA 1394
Query: 182 KETNQSFLIK 211
++ N++FL K
Sbjct: 1395 RDFNRAFLTK 1404
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/70 (44%), Positives = 50/70 (71%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
TVP Y+ Q++ LP ST E++ RNFLWG + + R+LH+++W +I KP +GGLG+ +
Sbjct: 803 TVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMA 862
Query: 182 KETNQSFLIK 211
++ N++FL K
Sbjct: 863 RDFNRAFLTK 872
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/70 (44%), Positives = 50/70 (71%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
TVP Y+ Q++ LP ST E++ RNFLWG + + R+LH+++W +I KP +GGLG+ +
Sbjct: 803 TVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMA 862
Query: 182 KETNQSFLIK 211
++ N++FL K
Sbjct: 863 RDFNRAFLTK 872
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 73.9 bits (180), Expect = 2e-11
Identities = 28/70 (40%), Positives = 48/70 (68%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P+Y+ Q KLP ST +++ +R+FLWG+++ KR +H + W I K +GGLGI +
Sbjct: 805 SIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSM 864
Query: 182 KETNQSFLIK 211
++ N +FL+K
Sbjct: 865 RQANSAFLVK 874
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 70.1 bits (170), Expect = 3e-10
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P Y+ Q KLP S + ++ N NFLWGD +K+++H ++W + KP +GGLG+
Sbjct: 350 SIPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKKIHLVNWESVCKPKHRGGLGLKKT 409
Query: 182 KETNQSFLIK 211
+ NQ+ L K
Sbjct: 410 ADMNQAMLAK 419
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 69.7 bits (169), Expect = 4e-10
Identities = 28/70 (40%), Positives = 47/70 (67%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P ++ I LPAS +++L+ ++RNFLWG +KR+ H + W K+ +P A GGLG+
Sbjct: 597 SIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRAS 656
Query: 182 KETNQSFLIK 211
K+ N++ L K
Sbjct: 657 KDMNRALLAK 666
>gb|EMT28796.1| Ferredoxin-dependent glutamate synthase, chloroplastic [Aegilops
tauschii]
Length = 1896
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y+ + K P S +EL + RNF WGDE+D+R+ H + W+K+ +P KGG+G L+
Sbjct: 172 LPVYAMGIFKFPVSLCEELSQIIRNFWWGDEEDRRKTHWLAWNKLTRPKGKGGMGFQDLR 231
Query: 185 ETNQSFLIK 211
NQ+ L K
Sbjct: 232 LFNQALLAK 240
>gb|EMS67416.1| Protein argonaute 1D [Triticum urartu]
Length = 1573
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y+ + K PAS +EL + RNF WGDE+++R+ H + W K+ KP A+ G+G L+
Sbjct: 1038 LPVYAMGIFKFPASLCEELAQIIRNFWWGDEENRRKTHWLAWDKMTKPKAEDGMGFRDLR 1097
Query: 185 ETNQSFLIK 211
NQ+ L K
Sbjct: 1098 LFNQALLAK 1106
>ref|XP_002527028.1| conserved hypothetical protein [Ricinus communis]
gi|223533663|gb|EEF35400.1| conserved hypothetical
protein [Ricinus communis]
Length = 138
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P Y+ Q +KL ST E++ + RNF+WG K++LH ++W+KI GGLG+
Sbjct: 68 SIPMYTMQTMKLSVSTCDEIDLLVRNFIWGSSDAKKKLHLVNWNKIYHQKNYGGLGLKYA 127
Query: 182 KETNQSFLIK 211
+ TN++ L+K
Sbjct: 128 RSTNEALLMK 137
>gb|EMT20940.1| ABC transporter C family member 10 [Aegilops tauschii]
Length = 2212
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +2
Query: 14 YSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLKETN 193
Y+ + K AS +EL + RNF WGDE D+R++H + W K+ P KGG+G L+ N
Sbjct: 74 YAMSVFKFSASPCEELSQITRNFWWGDENDRRKIHWLAWDKLLMPKEKGGMGFRDLRLFN 133
Query: 194 QSFLIK 211
Q+ L K
Sbjct: 134 QALLAK 139
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y+ Q K P S + L+ +NRNFLWGD + K+++H ++W + +P G +GI +
Sbjct: 63 IPNYAMQTAKFPVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPKQLGDIGIKKTE 122
Query: 185 ETNQSFLIK 211
+ NQ+ L K
Sbjct: 123 DMNQAMLAK 131
>gb|EOY20770.1| Ribonuclease H protein [Theobroma cacao]
Length = 370
Score = 63.9 bits (154), Expect = 2e-08
Identities = 25/63 (39%), Positives = 44/63 (69%)
Frame = +2
Query: 23 QLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLKETNQSF 202
Q++ +P S +++E + RNFLWG ++ R++H I W ++ +P +GG+GI LK N++F
Sbjct: 2 QVMPMPLSICQKIERLCRNFLWGSDESHRKIHLIKWEQLCRPKDEGGMGIRKLKLMNEAF 61
Query: 203 LIK 211
L+K
Sbjct: 62 LLK 64
>gb|EOY34749.1| Uncharacterized protein TCM_042329 [Theobroma cacao]
Length = 2606
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +2
Query: 8 PFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLKE 187
P Y Q+IK P + I+++E + +FLWGD D ++LH W KI P ++GGLGI L++
Sbjct: 1325 PMYLLQVIKPPVTVIEKIERLFNSFLWGDSNDGKKLHWTAWSKITFPVSEGGLGIRNLRD 1384
Query: 188 TNQSFLIK 211
++F +K
Sbjct: 1385 VFEAFSLK 1392
>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P Y Q++K PA I+++E + +FLWG D +H WH I P+++GGLGI L
Sbjct: 766 SMPIYLLQVLKPPACVIQKIERLFNSFLWGSSMDSTRIHWTAWHNITFPSSEGGLGIRSL 825
Query: 182 KETNQSFLIK 211
K++ +F K
Sbjct: 826 KDSFDAFSAK 835
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 63.2 bits (152), Expect = 4e-08
Identities = 26/70 (37%), Positives = 45/70 (64%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P ++ I LP ST+ L+ ++R+FLWG +R+ H I W ++ KP ++GGLGI
Sbjct: 324 SIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKA 383
Query: 182 KETNQSFLIK 211
++ N++ L K
Sbjct: 384 QDMNKALLSK 393
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +2
Query: 2 TVPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLL 181
++P + I LP ST+ L+ +R FLWG +K++ H + W KI KP A+GG+G+
Sbjct: 662 SIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSA 721
Query: 182 KETNQSFLIK 211
++ N++ + K
Sbjct: 722 RDMNKALVAK 731
>gb|AAO34487.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108709868|gb|ABF97663.1| retrotransposon protein,
putative, LINE subclass [Oryza sativa Japonica Group]
Length = 435
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y + K+P S +E + R F WG+++ KR++H I WH++ KP ++GG+ LK
Sbjct: 80 LPMYMMSVSKIPVSLCEEYMQLIRKFWWGEDRHKRKVHWISWHQLVKPKSQGGISFRYLK 139
Query: 185 ETNQSFLIK 211
NQ+ L +
Sbjct: 140 LFNQALLAR 148
>gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]
Length = 372
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y + KLP S +L M RN+ WG EK KR+ H + W KI +P A+GGLG +
Sbjct: 17 IPAYIMGVFKLPLSVCDDLTRMVRNYWWGSEKGKRKAHWMAWEKIIQPKARGGLGFRDYR 76
Query: 185 ETNQSFLIK 211
NQ+ L +
Sbjct: 77 IFNQALLAR 85
>gb|EAZ27809.1| hypothetical protein OsJ_11756 [Oryza sativa Japonica Group]
Length = 452
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y + K+P S +E + R F WG+++ KR++H I WH++ KP ++GG+ LK
Sbjct: 97 LPMYMMSVSKIPVSLCEEYMQLIRKFWWGEDRHKRKVHWISWHQLVKPKSQGGISFRYLK 156
Query: 185 ETNQSFLIK 211
NQ+ L +
Sbjct: 157 LFNQALLAR 165
>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
Length = 475
Score = 62.0 bits (149), Expect = 8e-08
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +2
Query: 5 VPFYSRQLIKLPASTIKELENMNRNFLWGDEKDKRELHTIDWHKIRKPNAKGGLGIHLLK 184
+P Y+ Q + +P T +++E RNFLW + R++H + W + +P +GGLGI ++
Sbjct: 320 IPSYAMQTVAIPEKTREKIEMHCRNFLWDGDSKARKIHAMKWKNMCRPKEEGGLGIRCMR 379
Query: 185 ETNQSFLIK 211
+ N +FL+K
Sbjct: 380 KMNNAFLLK 388