BLASTX nr result

ID: Catharanthus23_contig00038051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00038051
         (353 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242987.1| PREDICTED: putative late blight resistance p...    64   3e-08
ref|XP_004252037.1| PREDICTED: putative late blight resistance p...    61   2e-07
ref|XP_006351974.1| PREDICTED: putative late blight resistance p...    59   5e-07

>ref|XP_004242987.1| PREDICTED: putative late blight resistance protein homolog
           R1B-16-like [Solanum lycopersicum]
          Length = 584

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = -2

Query: 352 KLCSLETFINNHEQTTQILPSGIWSLAHLRHLRVGIFSFKVDELSNGDIDGSRGLS--LC 179
           +L +L+TFI N   T   LP  +W +  LRH+ +G   F  +  S     G  G+S  L 
Sbjct: 276 RLWNLQTFILNTSHTVN-LPETVWEMESLRHVYLGKGCFLPNPAS-----GFNGISKVLT 329

Query: 178 NLQTLTSLCIGNCTKEVLLKMPKLKKLGIQXXXXXXXXXELIFSCLGNLSLLNQLETL 5
           NLQT+T + I +CT+EV++ +P LKKL I                L NL  L QLE L
Sbjct: 330 NLQTITYMDIASCTREVVVNVPNLKKLSIHGRGECSSSEPSSSYYLSNLRYLKQLEKL 387


>ref|XP_004252037.1| PREDICTED: putative late blight resistance protein homolog
            R1B-16-like [Solanum lycopersicum]
          Length = 934

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
 Frame = -2

Query: 343  SLETFINNHEQTTQILPSGIWSLAHLRHLRVGIFSFKVDELSNGDIDGSRGLSLCNLQTL 164
            SL+T I +       LP  IW + +LRHL +   S  +   +N + +G   L L NLQTL
Sbjct: 631  SLQTLILHVYSRNSTLPREIWKMPNLRHLHIKP-SICLPSQTNEERNGYNSLVLNNLQTL 689

Query: 163  TSLCIGNCTKEVLLKMPKLKKLGIQXXXXXXXXXELIFS--------------------- 47
            T++ + +CT +V    PKLKKLGI          ++ +S                     
Sbjct: 690  TNITLADCTTDVFSSTPKLKKLGICETVEYTYPVQIPWSDFLYTSENLWPYCSDTISDLW 749

Query: 46   --CLGNLSLLNQLETL 5
              CL NL+LL QLE L
Sbjct: 750  SDCLRNLALLPQLEAL 765


>ref|XP_006351974.1| PREDICTED: putative late blight resistance protein homolog
           R1B-16-like [Solanum tuberosum]
          Length = 926

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = -2

Query: 343 SLETFINNHEQTTQILPSGIWSLAHLRHLRVGIFSFKVDELSNGDIDGSRGLSLCNLQTL 164
           SL+T I +       LP  IW + +LRHL +   S  +   +N +  G   L L NLQTL
Sbjct: 623 SLQTLILHVYSRDSTLPREIWKMPNLRHLHIKP-SICLPSQTNEERSGHNSLVLNNLQTL 681

Query: 163 TSLCIGNCTKEVLLKMPKLKKLGI 92
           T++ + +CT +V    PKLKKLGI
Sbjct: 682 TNITLADCTTDVFSSTPKLKKLGI 705


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