BLASTX nr result
ID: Catharanthus23_contig00038051
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00038051 (353 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004242987.1| PREDICTED: putative late blight resistance p... 64 3e-08 ref|XP_004252037.1| PREDICTED: putative late blight resistance p... 61 2e-07 ref|XP_006351974.1| PREDICTED: putative late blight resistance p... 59 5e-07 >ref|XP_004242987.1| PREDICTED: putative late blight resistance protein homolog R1B-16-like [Solanum lycopersicum] Length = 584 Score = 63.5 bits (153), Expect = 3e-08 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 2/118 (1%) Frame = -2 Query: 352 KLCSLETFINNHEQTTQILPSGIWSLAHLRHLRVGIFSFKVDELSNGDIDGSRGLS--LC 179 +L +L+TFI N T LP +W + LRH+ +G F + S G G+S L Sbjct: 276 RLWNLQTFILNTSHTVN-LPETVWEMESLRHVYLGKGCFLPNPAS-----GFNGISKVLT 329 Query: 178 NLQTLTSLCIGNCTKEVLLKMPKLKKLGIQXXXXXXXXXELIFSCLGNLSLLNQLETL 5 NLQT+T + I +CT+EV++ +P LKKL I L NL L QLE L Sbjct: 330 NLQTITYMDIASCTREVVVNVPNLKKLSIHGRGECSSSEPSSSYYLSNLRYLKQLEKL 387 >ref|XP_004252037.1| PREDICTED: putative late blight resistance protein homolog R1B-16-like [Solanum lycopersicum] Length = 934 Score = 60.8 bits (146), Expect = 2e-07 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 23/136 (16%) Frame = -2 Query: 343 SLETFINNHEQTTQILPSGIWSLAHLRHLRVGIFSFKVDELSNGDIDGSRGLSLCNLQTL 164 SL+T I + LP IW + +LRHL + S + +N + +G L L NLQTL Sbjct: 631 SLQTLILHVYSRNSTLPREIWKMPNLRHLHIKP-SICLPSQTNEERNGYNSLVLNNLQTL 689 Query: 163 TSLCIGNCTKEVLLKMPKLKKLGIQXXXXXXXXXELIFS--------------------- 47 T++ + +CT +V PKLKKLGI ++ +S Sbjct: 690 TNITLADCTTDVFSSTPKLKKLGICETVEYTYPVQIPWSDFLYTSENLWPYCSDTISDLW 749 Query: 46 --CLGNLSLLNQLETL 5 CL NL+LL QLE L Sbjct: 750 SDCLRNLALLPQLEAL 765 >ref|XP_006351974.1| PREDICTED: putative late blight resistance protein homolog R1B-16-like [Solanum tuberosum] Length = 926 Score = 59.3 bits (142), Expect = 5e-07 Identities = 34/84 (40%), Positives = 47/84 (55%) Frame = -2 Query: 343 SLETFINNHEQTTQILPSGIWSLAHLRHLRVGIFSFKVDELSNGDIDGSRGLSLCNLQTL 164 SL+T I + LP IW + +LRHL + S + +N + G L L NLQTL Sbjct: 623 SLQTLILHVYSRDSTLPREIWKMPNLRHLHIKP-SICLPSQTNEERSGHNSLVLNNLQTL 681 Query: 163 TSLCIGNCTKEVLLKMPKLKKLGI 92 T++ + +CT +V PKLKKLGI Sbjct: 682 TNITLADCTTDVFSSTPKLKKLGI 705