BLASTX nr result

ID: Catharanthus23_contig00038043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00038043
         (268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bac...    77   3e-12
ref|WP_005514638.1| hypothetical protein [Vibrio mimicus] gi|258...    63   5e-08

>gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 89

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 47/82 (57%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = -2

Query: 267 VLSNALGYSPRPPVSVWGTDSFCLKLRDFSWKHGINHFVSKE-TRHHASDNHSG-FA*SA 94
           VLS+ALGYSP PPVSVWGT +F LKLR FSWK GINHF  K+  RH  S   S  F    
Sbjct: 8   VLSSALGYSPCPPVSVWGTVTFYLKLRGFSWKQGINHFGPKKGPRHRISGLLSRIFLREL 67

Query: 93  LLCA*TTIQQVAGLTFSVLPSQ 28
             C        A LTFSV PSQ
Sbjct: 68  PTCLNRDNHHPADLTFSVTPSQ 89


>ref|WP_005514638.1| hypothetical protein [Vibrio mimicus] gi|258583990|gb|EEW08769.1|
           hypothetical protein VMD_37440 [Vibrio mimicus VM573]
          Length = 104

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = -2

Query: 267 VLSNALGYSPRPPVSVWGTDSFCLKLRDFSWKHGINHFVSKETRHHAS 124
           VLS+AL +S RPPVSVWGT  + LKLR FSWKHGIN F +   R   S
Sbjct: 49  VLSSALVFSTRPPVSVWGTIPYNLKLRGFSWKHGINDFTTVVARRRVS 96


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