BLASTX nr result

ID: Catharanthus23_contig00037458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00037458
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006597223.1| PREDICTED: uncharacterized protein LOC102668...    59   9e-07
ref|XP_002309795.1| hypothetical protein POPTR_0007s01810g [Popu...    56   6e-06

>ref|XP_006597223.1| PREDICTED: uncharacterized protein LOC102668409 [Glycine max]
          Length = 123

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
 Frame = -1

Query: 334 EYLQARRAFLSSYQFSHEHK---SLNEKLKQSAKGIGKLAVEIFLQFREEISKKWVRFRV 164
           E+ +ARRAFL+SY  S E K   S  EKLK+S K + + A+ + L  R  +SK+ V  +V
Sbjct: 36  EFCEARRAFLNSYHLSLERKNNVSFKEKLKKSVKEVNEAAMGVVLGMRRGVSKRRVGIKV 95

Query: 163 YKFKIGWPTGVF-SMRCFVTW 104
           ++ K+   + V  ++RCF+ W
Sbjct: 96  FRVKMSSHSMVLVTLRCFIPW 116


>ref|XP_002309795.1| hypothetical protein POPTR_0007s01810g [Populus trichocarpa]
           gi|222852698|gb|EEE90245.1| hypothetical protein
           POPTR_0007s01810g [Populus trichocarpa]
          Length = 135

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = -1

Query: 331 YLQARRAFLSSYQFSHEHKSLNEKLKQSAKGIGKLAVEIFLQFREEISKKWVRFRVYKFK 152
           Y  ARRAFLSSY FS E+  + +KL++S K I ++   +    REEI K+ +R +V +F 
Sbjct: 38  YRNARRAFLSSYHFSEEN-GIRDKLRRSVKEINEVVRGVVSDIREEICKRRIRIKVCRFS 96

Query: 151 IGWPTGVFS 125
           +G P  + S
Sbjct: 97  LGLPCLILS 105


Top