BLASTX nr result
ID: Catharanthus23_contig00037406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00037406
(322 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229547.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_006359126.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera] 107 2e-21
ref|XP_004294060.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
gb|EOY14017.1| Tetratricopeptide repeat (TPR)-like superfamily p... 103 2e-20
gb|EOY14016.1| Tetratricopeptide repeat-like superfamily protein... 103 2e-20
gb|EMJ14858.1| hypothetical protein PRUPE_ppa001106mg [Prunus pe... 102 4e-20
gb|EXB53343.1| hypothetical protein L484_016225 [Morus notabilis] 102 5e-20
ref|XP_002310674.2| hypothetical protein POPTR_0007s08080g [Popu... 100 2e-19
ref|XP_006422241.1| hypothetical protein CICLE_v10004260mg [Citr... 100 3e-19
ref|XP_002513375.1| pentatricopeptide repeat-containing protein,... 99 5e-19
ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_003540076.2| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_004515321.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17
ref|XP_003599152.1| Pentatricopeptide repeat-containing protein ... 92 7e-17
ref|XP_004983787.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana] 87 2e-15
ref|NP_001185013.1| PPR repeat domain-containing protein [Arabid... 87 2e-15
ref|NP_173097.2| PPR repeat domain-containing protein [Arabidops... 87 2e-15
>ref|XP_004229547.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 1038
Score = 110 bits (276), Expect = 2e-22
Identities = 55/90 (61%), Positives = 65/90 (72%)
Frame = +1
Query: 52 GYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYVT 231
G EEALKLLL+MQR K++FDQF LEEG+Q+H LA KLGFDS +V
Sbjct: 645 GLWEEALKLLLQMQREKLEFDQFSLSAALSAAANLASLEEGQQIHCLATKLGFDSNSFVG 704
Query: 232 NCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
N MDMYGKCGE++DVLK+LPEPN+R RLS
Sbjct: 705 NATMDMYGKCGEMNDVLKILPEPNLRPRLS 734
>ref|XP_006359126.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 1038
Score = 107 bits (267), Expect = 2e-21
Identities = 53/90 (58%), Positives = 64/90 (71%)
Frame = +1
Query: 52 GYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYVT 231
G EEALKLLL+MQR K++FDQF LEEG+Q+H LA KLGFDS +V
Sbjct: 645 GLWEEALKLLLQMQREKLEFDQFSLSAALSAAANLASLEEGQQIHCLATKLGFDSNSFVG 704
Query: 232 NCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
N MDMYGKCGE+++VLK+ PEPN+R RLS
Sbjct: 705 NATMDMYGKCGEMNNVLKIFPEPNLRPRLS 734
>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 107 bits (266), Expect = 2e-21
Identities = 54/92 (58%), Positives = 63/92 (68%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG GEEALK+ EM+ V+ DQF LEEG+QLH L IKLGF+S +
Sbjct: 1329 HHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLH 1388
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
VTN AMDMYGKCGE+ DVLKMLP+P R+RLS
Sbjct: 1389 VTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 1420
>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 107 bits (266), Expect = 2e-21
Identities = 54/92 (58%), Positives = 63/92 (68%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG GEEALK+ EM+ V+ DQF LEEG+QLH L IKLGF+S +
Sbjct: 679 HHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLH 738
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
VTN AMDMYGKCGE+ DVLKMLP+P R+RLS
Sbjct: 739 VTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 770
>ref|XP_004294060.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Fragaria vesca subsp. vesca]
Length = 936
Score = 104 bits (259), Expect = 1e-20
Identities = 53/92 (57%), Positives = 63/92 (68%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
+HG EEALKL+L M R VDFDQF L EG+QLH L +KLGFD+ Y
Sbjct: 542 NHGL-EEALKLVLMMGRAGVDFDQFSLSVALSVSADLAMLVEGQQLHGLVVKLGFDTDHY 600
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
+TN AMDMYGKCGE+ DVLK+LP P +R+RLS
Sbjct: 601 ITNAAMDMYGKCGEMEDVLKILPSPTIRSRLS 632
>gb|EOY14017.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao]
Length = 787
Score = 103 bits (258), Expect = 2e-20
Identities = 50/91 (54%), Positives = 63/91 (69%)
Frame = +1
Query: 49 HGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYV 228
HG GEE LK +++M+ +D DQF LEEG+QLH +A+KLGFDS +V
Sbjct: 393 HGLGEEVLKHIVKMRTAGIDLDQFSFSEGLAATAKLAVLEEGQQLHCVAVKLGFDSDPFV 452
Query: 229 TNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
TN AMDMYGKCGE+ DVL+MLP+P R+RLS
Sbjct: 453 TNAAMDMYGKCGEMDDVLRMLPQPVSRSRLS 483
>gb|EOY14016.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 1196
Score = 103 bits (258), Expect = 2e-20
Identities = 50/91 (54%), Positives = 63/91 (69%)
Frame = +1
Query: 49 HGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYV 228
HG GEE LK +++M+ +D DQF LEEG+QLH +A+KLGFDS +V
Sbjct: 802 HGLGEEVLKHIVKMRTAGIDLDQFSFSEGLAATAKLAVLEEGQQLHCVAVKLGFDSDPFV 861
Query: 229 TNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
TN AMDMYGKCGE+ DVL+MLP+P R+RLS
Sbjct: 862 TNAAMDMYGKCGEMDDVLRMLPQPVSRSRLS 892
>gb|EMJ14858.1| hypothetical protein PRUPE_ppa001106mg [Prunus persica]
Length = 908
Score = 102 bits (255), Expect = 4e-20
Identities = 52/92 (56%), Positives = 63/92 (68%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
+HG E+ALKL++ M++ VD DQF LEEG+QLH L +KLGFDS Y
Sbjct: 514 NHGL-EKALKLVVMMKKAGVDLDQFSFSVALSVSADLAMLEEGQQLHGLVVKLGFDSDHY 572
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
VTN AMDMYGKCGE+ DVLK+LP P R+RLS
Sbjct: 573 VTNAAMDMYGKCGEMEDVLKLLPSPTNRSRLS 604
>gb|EXB53343.1| hypothetical protein L484_016225 [Morus notabilis]
Length = 920
Score = 102 bits (254), Expect = 5e-20
Identities = 51/92 (55%), Positives = 62/92 (67%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG GEEALKL+++M+ + DQF LEEG+QLH L IKLGF+ Y
Sbjct: 525 HHGCGEEALKLIMKMRNAGLLLDQFSLSVALSVSADLAILEEGQQLHGLVIKLGFELDHY 584
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
VTN AMDMYGKCGE+ DVL++L P +RTRLS
Sbjct: 585 VTNTAMDMYGKCGEMDDVLRILSPPFIRTRLS 616
>ref|XP_002310674.2| hypothetical protein POPTR_0007s08080g [Populus trichocarpa]
gi|550334392|gb|EEE91124.2| hypothetical protein
POPTR_0007s08080g [Populus trichocarpa]
Length = 999
Score = 100 bits (250), Expect = 2e-19
Identities = 49/92 (53%), Positives = 62/92 (67%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG+ EEALK LLEM+R V+ D+F LEEG+QLH LA+KLG DS +
Sbjct: 604 HHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPF 663
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
V + MDMYGKCGE+ DVL+++P P R+RLS
Sbjct: 664 VASATMDMYGKCGEIDDVLRIIPRPINRSRLS 695
>ref|XP_006422241.1| hypothetical protein CICLE_v10004260mg [Citrus clementina]
gi|557524114|gb|ESR35481.1| hypothetical protein
CICLE_v10004260mg [Citrus clementina]
Length = 936
Score = 100 bits (248), Expect = 3e-19
Identities = 51/91 (56%), Positives = 60/91 (65%)
Frame = +1
Query: 49 HGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYV 228
HG GEE LKLL++M+ T V FD+F LEEG QLH LA KLGFD +V
Sbjct: 543 HGQGEEVLKLLVKMRHTGVYFDRFSLSEGLAAAAKLAVLEEGHQLHGLATKLGFDLDPFV 602
Query: 229 TNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
TN AMDMYGKCGE+ DVL++ P+P R RLS
Sbjct: 603 TNAAMDMYGKCGEIGDVLRIAPQPVDRPRLS 633
>ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547283|gb|EEF48778.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 922
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/92 (53%), Positives = 63/92 (68%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
+HG EE+LKLL++M+ VD DQF LEEG+QL +LA+KLGFDS +
Sbjct: 797 YHGQMEESLKLLVKMRHAGVDLDQFSFSGCLSATATLAMLEEGQQLQSLAVKLGFDSDPF 856
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
VTN MDMY KCGEL DVL+++P+P R+RLS
Sbjct: 857 VTNALMDMYAKCGELDDVLRIIPQPLERSRLS 888
>ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +1
Query: 49 HGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYV 228
+G+GEEALKL++ M+ ++FDQF LEEG+QLH IKLGF+ ++
Sbjct: 544 YGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFI 603
Query: 229 TNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
N AMDMYGKCGEL D L++LP+P R+RLS
Sbjct: 604 INAAMDMYGKCGELDDALRILPQPTDRSRLS 634
>ref|XP_003540076.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1044
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/92 (47%), Positives = 60/92 (65%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
H+G GEEALKL+++M+ + DQF L+EG+QLH+L IK GF+S Y
Sbjct: 649 HYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDY 708
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
V N MDMYGKCGE+ DV ++LP+P R++ S
Sbjct: 709 VLNATMDMYGKCGEIDDVFRILPQPRSRSQRS 740
>ref|XP_004515321.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Cicer arietinum]
Length = 934
Score = 92.4 bits (228), Expect = 6e-17
Identities = 45/92 (48%), Positives = 57/92 (61%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
H+G GEEALK + M+ VD DQF L+EG+QLH+ IKLGF S +Y
Sbjct: 539 HYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFKSNEY 598
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
V N MDMYGKCGE+ DV ++LP P R++ S
Sbjct: 599 VLNATMDMYGKCGEIDDVFRILPLPKSRSQRS 630
>ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/92 (47%), Positives = 58/92 (63%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
H+G GEEALK + M+ VD DQF L+EG+QLH+ IKLGF+ +Y
Sbjct: 730 HYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEY 789
Query: 226 VTNCAMDMYGKCGELSDVLKMLPEPNMRTRLS 321
V N MDMYGKCGE+ DV ++LP P +R++ S
Sbjct: 790 VLNATMDMYGKCGEIDDVFRILPIPKIRSKRS 821
>ref|XP_004983787.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Setaria italica]
Length = 893
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/87 (48%), Positives = 54/87 (62%)
Frame = +1
Query: 49 HGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQYV 228
HG GEEALKL ++++ D+F LEEG QLH L++K G DS +V
Sbjct: 499 HGRGEEALKLFMDLRHAGNKLDRFCVAECLSSSACLASLEEGMQLHGLSVKCGLDSDSHV 558
Query: 229 TNCAMDMYGKCGELSDVLKMLPEPNMR 309
N AMDMYGKCG++ D+LKMLP+P R
Sbjct: 559 VNAAMDMYGKCGKMDDMLKMLPDPASR 585
>gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG+GEE LKL+ +M+ V DQF LEEG+QLH LA+KLGF+ +
Sbjct: 632 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 691
Query: 226 VTNCAMDMYGKCGELSDVLKMLP 294
+ N A DMY KCGE+ +V+KMLP
Sbjct: 692 IFNAAADMYSKCGEIGEVVKMLP 714
>ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing
protein [Arabidopsis thaliana]
Length = 928
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG+GEE LKL+ +M+ V DQF LEEG+QLH LA+KLGF+ +
Sbjct: 525 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 584
Query: 226 VTNCAMDMYGKCGELSDVLKMLP 294
+ N A DMY KCGE+ +V+KMLP
Sbjct: 585 IFNAAADMYSKCGEIGEVVKMLP 607
>ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing
protein [Arabidopsis thaliana]
Length = 937
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = +1
Query: 46 HHGYGEEALKLLLEMQRTKVDFDQFXXXXXXXXXXXXXCLEEGKQLHNLAIKLGFDSYQY 225
HHG+GEE LKL+ +M+ V DQF LEEG+QLH LA+KLGF+ +
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 601
Query: 226 VTNCAMDMYGKCGELSDVLKMLP 294
+ N A DMY KCGE+ +V+KMLP
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLP 624