BLASTX nr result
ID: Catharanthus23_contig00037345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00037345
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006476514.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
ref|XP_006439492.1| hypothetical protein CICLE_v10018905mg [Citr... 75 1e-11
gb|EMJ10226.1| hypothetical protein PRUPE_ppa023983mg, partial [... 73 4e-11
ref|XP_002299515.2| hypothetical protein POPTR_0001s09740g, part... 72 6e-11
emb|CBI34375.3| unnamed protein product [Vitis vinifera] 72 6e-11
gb|EOY24832.1| Pentatricopeptide repeat superfamily protein, put... 69 5e-10
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_002884708.1| pentatricopeptide repeat-containing protein ... 60 3e-07
gb|ABK26521.1| unknown [Picea sitchensis] 60 3e-07
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis] 60 4e-07
ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutr... 60 4e-07
gb|EMJ11519.1| hypothetical protein PRUPE_ppa002162mg [Prunus pe... 60 4e-07
ref|XP_006660222.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
gb|EMJ00568.1| hypothetical protein PRUPE_ppa025439mg [Prunus pe... 59 7e-07
ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutr... 59 9e-07
ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara... 59 9e-07
gb|AAP40452.1| unknown protein [Arabidopsis thaliana] 59 9e-07
emb|CAB66100.1| putative protein [Arabidopsis thaliana] 59 9e-07
gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis] 58 1e-06
ref|XP_006295891.1| hypothetical protein CARUB_v10025021mg [Caps... 58 1e-06
>ref|XP_006476514.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Citrus sinensis]
Length = 801
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
+NES++VLLSN+YASAG+WN G++R+EMKEK + KEPGYSWI VG
Sbjct: 720 DNESSYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 765
>ref|XP_006439492.1| hypothetical protein CICLE_v10018905mg [Citrus clementina]
gi|557541754|gb|ESR52732.1| hypothetical protein
CICLE_v10018905mg [Citrus clementina]
Length = 801
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
+NES +VLLSN+YASAG+WN G++R+EMKEK + KEPGYSWI VG
Sbjct: 720 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 765
>gb|EMJ10226.1| hypothetical protein PRUPE_ppa023983mg, partial [Prunus persica]
Length = 697
Score = 72.8 bits (177), Expect = 4e-11
Identities = 30/44 (68%), Positives = 41/44 (93%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQ 133
+NESA++LLSN+YASAG+W+A G++R+EMKEK+V KEPG SW+Q
Sbjct: 654 DNESAYILLSNLYASAGMWSAVGKVRKEMKEKIVYKEPGSSWLQ 697
>ref|XP_002299515.2| hypothetical protein POPTR_0001s09740g, partial [Populus
trichocarpa] gi|550346914|gb|EEE84320.2| hypothetical
protein POPTR_0001s09740g, partial [Populus trichocarpa]
Length = 706
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQ 133
ENESA++LLSN+YAS G+WNA G +R+EMKEK + KEPG SWIQ
Sbjct: 663 ENESAYILLSNLYASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQ 706
>emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
EN+SA+VLLSN+YASAG WNA G++RR MK+K++ KEPG SWIQV
Sbjct: 720 ENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQV 764
>gb|EOY24832.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 811
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +2
Query: 5 NESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
NESA+VLLSN+ ASAG+WNA ++RREMKEK++ KEPG SWIQV
Sbjct: 721 NESAYVLLSNLCASAGMWNAVRKLRREMKEKLLCKEPGSSWIQV 764
>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
unnamed protein product [Vitis vinifera]
Length = 743
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV-G*FLPFSPDD--SL 172
+N +++VLLS++YAS G W+ ++RR M++K V KEPGYSWI+ G FS DD S
Sbjct: 572 QNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSP 631
Query: 173 FIGEICA 193
F+G+I A
Sbjct: 632 FLGQIYA 638
>ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330548|gb|EFH60967.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1028
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
+N SA+VLLSN+YAS G W A +R+ M+++ V K PGYSWI VG
Sbjct: 934 QNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVG 979
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
EN +VLLSN+YA+AG W+ AG++R+ MK++ V KEPG SWI+V
Sbjct: 199 ENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243
>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
Length = 622
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
EN ++LLSN+YAS+G W A +MR +MKEK + K+PG SWI+VG
Sbjct: 530 ENAGTYLLLSNVYASSGKWREAAKMRLKMKEKGLKKQPGCSWIEVG 575
>ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutrema salsugineum]
gi|557103976|gb|ESQ44330.1| hypothetical protein
EUTSA_v10005782mg [Eutrema salsugineum]
Length = 888
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +2
Query: 11 SAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
S +VLL+N+Y+SAG+W+ A E+RR+MKE+ V KEPG SWI+ G
Sbjct: 720 SHYVLLANIYSSAGLWDKATEVRRKMKEQGVRKEPGCSWIEYG 762
>gb|EMJ11519.1| hypothetical protein PRUPE_ppa002162mg [Prunus persica]
Length = 707
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
EN +VLLSN+YA++G W G+MR +MK+K V K PGYSW++V
Sbjct: 536 ENAGMYVLLSNLYAASGRWGEVGKMRLKMKDKGVRKVPGYSWVEV 580
>ref|XP_006660222.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Oryza brachyantha]
Length = 490
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
E+ A+V+LSN+YA+AG+WN +R +MKEK V K+PG+SW ++
Sbjct: 397 ESSGAYVMLSNIYAAAGMWNEVNRVRGQMKEKGVKKQPGHSWTEI 441
>gb|EMJ00568.1| hypothetical protein PRUPE_ppa025439mg [Prunus persica]
Length = 1015
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
+N S +VLLSN++A++G WN A +RR MKEK V K PG SWI VG
Sbjct: 907 QNSSPYVLLSNIHAASGNWNEASSLRRAMKEKGVTKVPGCSWIVVG 952
>ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutrema salsugineum]
gi|557089963|gb|ESQ30671.1| hypothetical protein
EUTSA_v10011302mg [Eutrema salsugineum]
Length = 650
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
EN +VLLSN+YAS+G W G++R +M++K V K PGYSWI++
Sbjct: 479 ENSGMYVLLSNLYASSGRWGDVGKLRLKMRDKGVKKVPGYSWIEI 523
>ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +2
Query: 11 SAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
S +VLL+N+Y+SAG+W+ A E+RR MKE+ V KEPG SWI+ G
Sbjct: 722 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHG 764
>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +2
Query: 11 SAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
S +VLL+N+Y+SAG+W+ A E+RR MKE+ V KEPG SWI+ G
Sbjct: 722 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHG 764
>emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +2
Query: 11 SAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
S +VLL+N+Y+SAG+W+ A E+RR MKE+ V KEPG SWI+ G
Sbjct: 635 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHG 677
>gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]
Length = 877
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 11 SAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQVG 139
S +VLLSN+Y+SAG+W+ A ++RR MKE V KEPG SWI+ G
Sbjct: 709 SHYVLLSNIYSSAGLWDEAMDVRRRMKEMGVRKEPGCSWIEFG 751
>ref|XP_006295891.1| hypothetical protein CARUB_v10025021mg [Capsella rubella]
gi|482564599|gb|EOA28789.1| hypothetical protein
CARUB_v10025021mg [Capsella rubella]
Length = 859
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +2
Query: 2 ENESAFVLLSNMYASAGIWNAAGEMRREMKEKVVNKEPGYSWIQV 136
E+ +A+VLLSNMYA +G W ++R+ M E+ V KEPGYSWI+V
Sbjct: 687 EDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 731