BLASTX nr result

ID: Catharanthus23_contig00037304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00037304
         (272 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365207.1| PREDICTED: methyl-CpG-binding domain-contain...    62   6e-08
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    57   3e-06
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_004239350.1| PREDICTED: methyl-CpG-binding domain-contain...    56   6e-06

>ref|XP_006365207.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Solanum tuberosum]
          Length = 2173

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   ALQVWEFLCRFSEVLGLQ-PFPFQELADDLINPRADSLNSWEALRTEIRDS---GYASSG 169
           ALQVWEFL RFSEVLGL+ PF F+E+ ++L++P  D  +S E    EI+D+     A  G
Sbjct: 719 ALQVWEFLLRFSEVLGLKVPFLFEEIEEELVSPWIDKTSSMEIPILEIQDARELTLARGG 778

Query: 170 SSREAFRAGDSCHSSCICTGITLTDSHGSLLK 265
               + R G   H      G+ LT  HG LLK
Sbjct: 779 MDSLSGRLG--FHQYSRYAGVLLTKIHGLLLK 808


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 35/123 (28%)
 Frame = +2

Query: 5    LQVWEFLCRFSEVLGL-QPFPFQELADDLINPRADSLNSWEALRTEIRD----------- 148
            +QVWE L RF E+LGL +PF  +EL ++LI P +D LN  E   TE ++           
Sbjct: 697  IQVWESLWRFYEILGLKEPFSIEELEEELICPWSDDLNLLEKFGTETQENRDITPTRPSG 756

Query: 149  -SGYASS----------------------GSSREAFRAGDSCHSSCICTGITLTDSHGSL 259
             SG+  S                      G  +EA +A  +  +   C+G+TLT +H SL
Sbjct: 757  ASGHIPSSSTDSGPEVSTGNPHAFIQMETGQKKEAAQAKLASVTYSRCSGVTLTKAHNSL 816

Query: 260  LKV 268
            LKV
Sbjct: 817  LKV 819


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 35/123 (28%)
 Frame = +2

Query: 5    LQVWEFLCRFSEVLGL-QPFPFQELADDLINPRADSLNSWEALRTEIRD----------- 148
            +QVWE L RF E+LGL +PF  +EL ++LI P +D LN  E   TE ++           
Sbjct: 635  IQVWESLWRFYEILGLKEPFSIEELEEELICPWSDDLNLLEKFGTETQENRDITPTRPSG 694

Query: 149  -SGYASS----------------------GSSREAFRAGDSCHSSCICTGITLTDSHGSL 259
             SG+  S                      G  +EA +A  +  +   C+G+TLT +H SL
Sbjct: 695  ASGHIPSSSTDSGPEVSTGNPHAFIQMETGQKKEAAQAKLASVTYSRCSGVTLTKAHNSL 754

Query: 260  LKV 268
            LKV
Sbjct: 755  LKV 757


>ref|XP_004239350.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Solanum lycopersicum]
          Length = 2151

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
 Frame = +2

Query: 5   LQVWEFLCRFSEVLGLQ-PFPFQELADDLINPRADSLNSWEALRTEI---RDSGYASSGS 172
           LQVWEFL RFSEVLGL+ PF F+E+ ++L++   D  +S E    EI   R+   A  G 
Sbjct: 715 LQVWEFLLRFSEVLGLKVPFLFEEIEEELVSRWIDKTSSMEMPAIEIQDVREITLARGGI 774

Query: 173 SREAFRAGDSCHSSCICTGITLTDSHGSLLK 265
              + R G + +S     G+ LT  HG LLK
Sbjct: 775 DSLSGRFGFNQNSR--YAGVLLTKIHGLLLK 803


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