BLASTX nr result
ID: Catharanthus23_contig00036997
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00036997
(276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe... 103 3e-20
ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 102 5e-20
gb|EOY01103.1| Cleavage and polyadenylation specificity factor 7... 102 7e-20
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 102 7e-20
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 102 7e-20
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 102 7e-20
emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera] 101 1e-19
gb|ESW25230.1| hypothetical protein PHAVU_003G018200g [Phaseolus... 100 2e-19
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 100 3e-19
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 98 1e-18
ref|XP_006574817.1| PREDICTED: cleavage and polyadenylation spec... 96 4e-18
ref|XP_006574816.1| PREDICTED: cleavage and polyadenylation spec... 96 4e-18
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 95 1e-17
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr... 92 7e-17
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 91 2e-16
ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Popu... 91 2e-16
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu... 91 2e-16
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 91 2e-16
gb|AFK42005.1| unknown [Medicago truncatula] 87 2e-15
gb|ACJ86282.1| unknown [Medicago truncatula] gi|388517311|gb|AFK... 87 2e-15
>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 103 bits (256), Expect = 3e-20
Identities = 53/92 (57%), Positives = 66/92 (71%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM +LKGK +SE IQC+ PANNETVSI S HYVKA AS F+RS +PNFKF
Sbjct: 415 LVHGEKPKMATLKGKIQSELGIQCHDPANNETVSISSTHYVKALASDAFIRSCSNPNFKF 474
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+S+ + + N + + P LR D+RVA+G
Sbjct: 475 SKSSQEDEHGSNSRNNNFTPRLRVSDERVAEG 506
>ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Cicer arietinum]
Length = 532
Score = 102 bits (254), Expect = 5e-20
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + SE IQCY PANNETV IPS YV AEAS TF+R+ +PNF+F
Sbjct: 412 LVHGEKPKMASLKERIHSELGIQCYNPANNETVCIPSTQYVNAEASGTFIRNCLNPNFQF 471
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+ + + S ++D + P L+ D+RVADG
Sbjct: 472 QKCSSEDTSNSTMIDKNLTPKLQVEDERVADG 503
>gb|EOY01103.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 102 bits (253), Expect = 7e-20
Identities = 50/92 (54%), Positives = 65/92 (70%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM +LK + +SE IQCY PANN+TV+IP+ HYVKA+AS F++S +PNFKF
Sbjct: 411 LVHGEKPKMATLKERIQSELGIQCYCPANNDTVTIPTTHYVKADASDAFIKSCLNPNFKF 470
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+S+ KS D P L+ D+RVA+G
Sbjct: 471 SKSSSVDKSYSGSNDSKAIPGLQVSDERVAEG 502
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 102 bits (253), Expect = 7e-20
Identities = 50/92 (54%), Positives = 67/92 (72%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + ES+ RI CY PANNE+ I + HY+KAEAS +FL+S+ SPNFKF
Sbjct: 413 LVHGEKPKMASLKERIESDLRIPCYYPANNESQRIETTHYIKAEASKSFLQSSLSPNFKF 472
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L++ + + V++ E ++ CDDRVA+G
Sbjct: 473 LKTISRADTGF-VLNERAESCVQVCDDRVAEG 503
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 102 bits (253), Expect = 7e-20
Identities = 50/92 (54%), Positives = 67/92 (72%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLKGK ES+ IQCY PANN+TV IPS ++KA+ S TF+RS+ +PNFKF
Sbjct: 1661 LVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKF 1720
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+++ + KS L + +L+ D+RVA+G
Sbjct: 1721 VKTISEDKSNLVSKETEATSVLQVHDERVAEG 1752
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 102 bits (253), Expect = 7e-20
Identities = 50/92 (54%), Positives = 67/92 (72%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLKGK ES+ IQCY PANN+TV IPS ++KA+ S TF+RS+ +PNFKF
Sbjct: 467 LVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKF 526
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+++ + KS L + +L+ D+RVA+G
Sbjct: 527 VKTISEDKSNLVSKETEATSVLQVHDERVAEG 558
>emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]
Length = 328
Score = 101 bits (251), Expect = 1e-19
Identities = 50/92 (54%), Positives = 66/92 (71%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLKGK ES+ IQCY PANN+TV IPS ++KA+ S TF+RS+ +PNFKF
Sbjct: 91 LVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKF 150
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+++ + KS L + L+ D+RVA+G
Sbjct: 151 VKTISEDKSNLVSKETKATSXLQVHDERVAEG 182
>gb|ESW25230.1| hypothetical protein PHAVU_003G018200g [Phaseolus vulgaris]
Length = 537
Score = 100 bits (250), Expect = 2e-19
Identities = 52/92 (56%), Positives = 61/92 (66%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEK KM SLK K SEF IQCY PANNET+ IPS HYV AEAS TF+RS SPNF F
Sbjct: 412 LVHGEKHKMASLKEKIHSEFGIQCYDPANNETICIPSTHYVNAEASDTFIRSCLSPNFTF 471
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+ N D + P+L+ D+RV++G
Sbjct: 472 QKCNSADIYNSTTPDKNLMPMLQVEDERVSEG 503
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 100 bits (248), Expect = 3e-19
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + ES+ RI CY PANNE+ I S Y+KAEAS +FL+S+ SPNFKF
Sbjct: 413 LVHGEKPKMASLKERIESDLRIPCYYPANNESQCIESTQYIKAEASKSFLQSSLSPNFKF 472
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L++ + + +++ E ++ CDDRVA+G
Sbjct: 473 LKTISRADTGF-ILNERAESCIQVCDDRVAEG 503
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/92 (54%), Positives = 62/92 (67%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + +SE IQCYVPAN ET+ IPS +VKA+AS F+RS SPNF+F
Sbjct: 412 LVHGEKPKMASLKERIQSELEIQCYVPANCETLCIPSTLFVKADASEAFIRSCLSPNFRF 471
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L + K S L + + L D+RVA+G
Sbjct: 472 LNKSLKDTSDLVLHSTNATSRLEVSDERVAEG 503
>ref|XP_006574817.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like isoform X2 [Glycine max]
Length = 528
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/92 (56%), Positives = 61/92 (66%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEK KM SLK K SE IQCY PANNETV+IPSA+YV AE S TF+RS SPNF F
Sbjct: 408 LVHGEKHKMASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSDTFIRSCLSPNFTF 467
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+ + VD + P L+ D+RVA+G
Sbjct: 468 QKCSSVDLCNSTTVDRNLMPELQVEDERVAEG 499
>ref|XP_006574816.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like isoform X1 [Glycine max]
Length = 532
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/92 (56%), Positives = 61/92 (66%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEK KM SLK K SE IQCY PANNETV+IPSA+YV AE S TF+RS SPNF F
Sbjct: 412 LVHGEKHKMASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSDTFIRSCLSPNFTF 471
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+ + VD + P L+ D+RVA+G
Sbjct: 472 QKCSSVDLCNSTTVDRNLMPELQVEDERVAEG 503
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 94.7 bits (234), Expect = 1e-17
Identities = 50/92 (54%), Positives = 60/92 (65%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM +LKG+ E+E IQCY PA NETVSIPS HY A S F++S SPNFKF
Sbjct: 407 LVHGEKPKMATLKGRIETELGIQCYYPAINETVSIPSTHYATAVTSDAFVQSCSSPNFKF 466
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
S+ + + + P LR DDRVA+G
Sbjct: 467 STSSSEHSQGSS--NSKSIPRLRVSDDRVAEG 496
>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
gi|557550770|gb|ESR61399.1| hypothetical protein
CICLE_v10014563mg [Citrus clementina]
Length = 646
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM +LK + +SE I+CY PANNE++ IPS HYVKA AS F+RS +PNF+F
Sbjct: 407 LVHGEKPKMATLKERIQSELGIKCYDPANNESMCIPSTHYVKAGASDAFIRSCMNPNFQF 466
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L+S + KS L D+RVA+G
Sbjct: 467 LKSGSEEKSVSGSKCTEGTLPLWIKDERVAEG 498
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 90.9 bits (224), Expect = 2e-16
Identities = 47/92 (51%), Positives = 61/92 (66%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM +LK + +SE I+CY PANNE++ IPS HYVKA AS F+RS +PNF++
Sbjct: 407 LVHGEKPKMATLKERIQSELGIKCYDPANNESMCIPSTHYVKAGASDAFIRSCMNPNFQY 466
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L+S + KS L D+RVA+G
Sbjct: 467 LKSGSEEKSVSGSKCTEGTLPLWIKDERVAEG 498
>ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329588|gb|ERP56232.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 368
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + ++E RI CY+PAN + V IPS YVKA AS+TF+RS +PNF+F
Sbjct: 155 LVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRF 214
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L+ + + S + + + L+ D+RVA+G
Sbjct: 215 LKRSKEDNSDQVLRNTNPTAPLQVNDERVAEG 246
>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329587|gb|ERP56231.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 464
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + ++E RI CY+PAN + V IPS YVKA AS+TF+RS +PNF+F
Sbjct: 251 LVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRF 310
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L+ + + S + + + L+ D+RVA+G
Sbjct: 311 LKRSKEDNSDQVLRNTNPTAPLQVNDERVAEG 342
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase
family protein [Populus trichocarpa]
Length = 625
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHGEKPKM SLK + ++E RI CY+PAN + V IPS YVKA AS+TF+RS +PNF+F
Sbjct: 412 LVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRF 471
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
L+ + + S + + + L+ D+RVA+G
Sbjct: 472 LKRSKEDNSDQVLRNTNPTAPLQVNDERVAEG 503
>gb|AFK42005.1| unknown [Medicago truncatula]
Length = 534
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/92 (48%), Positives = 59/92 (64%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHG+KPKM SLK + +SE I C PANNE V+I S YV AEAS TF ++ +PNFKF
Sbjct: 412 LVHGDKPKMVSLKERIDSELGIPCSHPANNEIVTISSTQYVNAEASDTFTKNCLNPNFKF 471
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+ + ++D + P L+ D+RVADG
Sbjct: 472 QKCSSMDTCNSTLIDRNLTPELQVEDERVADG 503
>gb|ACJ86282.1| unknown [Medicago truncatula] gi|388517311|gb|AFK46717.1| unknown
[Medicago truncatula]
Length = 277
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/92 (48%), Positives = 59/92 (64%)
Frame = -1
Query: 276 LVHGEKPKMESLKGKFESEFRIQCYVPANNETVSIPSAHYVKAEASSTFLRSTYSPNFKF 97
LVHG+KPKM SLK + +SE I C PANNE V+I S YV AEAS TF ++ +PNFKF
Sbjct: 155 LVHGDKPKMVSLKERIDSELGIPCSHPANNEIVTISSTQYVNAEASDTFTKNCLNPNFKF 214
Query: 96 LRSNFKVKSKLNVVDMSDEPLLRACDDRVADG 1
+ + ++D + P L+ D+RVADG
Sbjct: 215 QKCSSMDTCNSTLIDRNLTPELQVEDERVADG 246