BLASTX nr result
ID: Catharanthus23_contig00036991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00036991
(306 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 174 8e-42
ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated... 169 4e-40
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 164 1e-38
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 164 1e-38
gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobro... 156 2e-36
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 154 2e-35
gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus pe... 153 3e-35
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 151 8e-35
gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [... 150 2e-34
gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus pe... 149 3e-34
gb|EEE54879.1| hypothetical protein OsJ_02376 [Oryza sativa Japo... 149 3e-34
gb|EEC70970.1| hypothetical protein OsI_02594 [Oryza sativa Indi... 149 3e-34
tpg|DAA53121.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 148 8e-34
tpg|DAA53120.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 148 8e-34
tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 148 8e-34
ref|XP_002455848.1| hypothetical protein SORBIDRAFT_03g026150 [S... 148 8e-34
ref|XP_003601650.1| Small subunit processome component-like prot... 147 2e-33
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 146 3e-33
ref|XP_004969406.1| PREDICTED: small subunit processome componen... 145 7e-33
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 144 9e-33
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 174 bits (442), Expect = 8e-42
Identities = 84/101 (83%), Positives = 94/101 (93%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDF PFLQR+V SLV LLKSGADREPEIIEQIF SWSYIMMYLQKYLI+D+VHVLK
Sbjct: 124 RDLLEDFFPFLQRVVGSLVSLLKSGADREPEIIEQIFTSWSYIMMYLQKYLIRDIVHVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT +LR+YPKDYVQEFMAE+VSF+LRNAP QLIKG+RK++
Sbjct: 184 VTVKLRYYPKDYVQEFMAEAVSFLLRNAPVEQLIKGVRKIM 224
>ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Vitis
vinifera]
Length = 224
Score = 169 bits (428), Expect = 4e-40
Identities = 83/97 (85%), Positives = 90/97 (92%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDF PFLQR+V SLV LLKSGADREPEIIEQIF SWSYIMMYLQKYLI+D+VHVLK
Sbjct: 124 RDLLEDFFPFLQRVVGSLVSLLKSGADREPEIIEQIFTSWSYIMMYLQKYLIRDIVHVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGI 15
VT +LR+YPKDYVQEFMAE+VSF+LRNAP QLIKGI
Sbjct: 184 VTVKLRYYPKDYVQEFMAEAVSFLLRNAPVEQLIKGI 220
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 164 bits (415), Expect = 1e-38
Identities = 80/101 (79%), Positives = 91/101 (90%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDFLPFLQRI SL LLKSGADREP+IIEQIF SWS+IMMYLQKYL+KDVV VLK
Sbjct: 124 RDLLEDFLPFLQRIADSLACLLKSGADREPDIIEQIFRSWSFIMMYLQKYLVKDVVDVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT +LR+YPK+YV EFMA+SVSF+LRNAP QLIKG+RK++
Sbjct: 184 VTVQLRYYPKEYVHEFMADSVSFILRNAPVKQLIKGVRKLM 224
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 164 bits (415), Expect = 1e-38
Identities = 80/101 (79%), Positives = 91/101 (90%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDFLPFLQRI SL LLKSGADREP+IIEQIF SWS+IMMYLQKYL+KDVV VLK
Sbjct: 124 RDLLEDFLPFLQRIADSLACLLKSGADREPDIIEQIFRSWSFIMMYLQKYLVKDVVDVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT +LR+YPK+YV EFMA+SVSF+LRNAP QLIKG+RK++
Sbjct: 184 VTVQLRYYPKEYVHEFMADSVSFILRNAPVKQLIKGVRKLM 224
>gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobroma cacao]
Length = 2725
Score = 156 bits (395), Expect = 2e-36
Identities = 77/101 (76%), Positives = 89/101 (88%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDFLPFL R+ SLV LLKSGADREPEIIEQIF SWS IMM+LQKY I+D+++VLK
Sbjct: 124 RDLLEDFLPFLPRMADSLVSLLKSGADREPEIIEQIFTSWSCIMMHLQKYFIRDIINVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT +LR+Y KDYVQEFMAE+ SF+LRNAP QLIKGIRK++
Sbjct: 184 VTVQLRYYGKDYVQEFMAEATSFLLRNAPVEQLIKGIRKIM 224
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 154 bits (388), Expect = 2e-35
Identities = 75/101 (74%), Positives = 88/101 (87%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDF+ FL +IV S FLL++GADREPEIIEQIF SWSYI+MYLQKYL+KDVVHVLK
Sbjct: 124 RDLLEDFIFFLPKIVDSFSFLLENGADREPEIIEQIFTSWSYILMYLQKYLVKDVVHVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT +LR+YPK YVQEFMA + SF+LR+AP QL KGIRK++
Sbjct: 184 VTEKLRYYPKVYVQEFMAAATSFLLRSAPNEQLKKGIRKIM 224
>gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 153 bits (386), Expect = 3e-35
Identities = 74/101 (73%), Positives = 88/101 (87%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDF+PFL RI SLV LL+SGADREPE IEQIF SWS IMMYLQKYL++ +VHVLK
Sbjct: 124 RDLLEDFIPFLPRIADSLVCLLESGADREPETIEQIFTSWSSIMMYLQKYLVQKLVHVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT +LR+YPKDY+QEFMAE +SF+LRNAP QL +G++KV+
Sbjct: 184 VTVKLRYYPKDYIQEFMAEGMSFLLRNAPFEQLKEGVKKVM 224
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 151 bits (382), Expect = 8e-35
Identities = 73/101 (72%), Positives = 90/101 (89%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLE+F+P L RIV SLV LL+SG DREP+IIEQIF+SWSYIMMYLQKYL+++ VLK
Sbjct: 124 RDLLEEFVPLLPRIVDSLVSLLESGGDREPDIIEQIFMSWSYIMMYLQKYLVRNPSEVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VTS+LR+YPK+YVQ+FMAE++SFVLRNAP QL +GIR+V+
Sbjct: 184 VTSKLRYYPKEYVQQFMAEAMSFVLRNAPDEQLKRGIRRVI 224
>gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus
vulgaris]
Length = 2722
Score = 150 bits (379), Expect = 2e-34
Identities = 72/101 (71%), Positives = 90/101 (89%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLE+F+P L RI+ SLV LL++G DREP+IIEQIF+SWSYIMMYLQKYLI++ VLK
Sbjct: 153 RDLLEEFVPLLPRIIDSLVSLLENGGDREPDIIEQIFISWSYIMMYLQKYLIRNPSEVLK 212
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VTS+LR+YPK+YVQ+FMAE++SFVLRNAP QL +GIR+V+
Sbjct: 213 VTSKLRYYPKEYVQQFMAEAMSFVLRNAPDEQLERGIRRVI 253
>gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 149 bits (377), Expect = 3e-34
Identities = 72/101 (71%), Positives = 85/101 (84%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLLEDF+PFL RI SLV LL+ GADREPE IEQIF SWS IMMYLQKYL++ +VHVL
Sbjct: 124 RDLLEDFIPFLPRIADSLVSLLECGADREPEAIEQIFTSWSSIMMYLQKYLVQKLVHVLN 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VT LR+YPKDY+QEFMAE +SF+LRNAP QL KG++K++
Sbjct: 184 VTVNLRYYPKDYIQEFMAEGMSFLLRNAPFEQLKKGVKKIM 224
>gb|EEE54879.1| hypothetical protein OsJ_02376 [Oryza sativa Japonica Group]
Length = 2372
Score = 149 bits (377), Expect = 3e-34
Identities = 70/101 (69%), Positives = 87/101 (86%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R ++++ LL G DR+PEI+EQ+F SWSY+MMYLQKYL+KDVV VL+
Sbjct: 124 RDILEDFLPFLGRHANAILALLSDGGDRDPEIMEQVFTSWSYVMMYLQKYLVKDVVQVLR 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LRF+PKDYV+EFMAESVSFVLRNAP Q I+G+R VL
Sbjct: 184 ITAPLRFFPKDYVREFMAESVSFVLRNAPNGQQIEGVRNVL 224
>gb|EEC70970.1| hypothetical protein OsI_02594 [Oryza sativa Indica Group]
Length = 2389
Score = 149 bits (377), Expect = 3e-34
Identities = 70/101 (69%), Positives = 87/101 (86%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R ++++ LL G DR+PEI+EQ+F SWSY+MMYLQKYL+KDVV VL+
Sbjct: 124 RDILEDFLPFLGRHANAILALLSDGGDRDPEIMEQVFTSWSYVMMYLQKYLVKDVVQVLR 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LRF+PKDYV+EFMAESVSFVLRNAP Q I+G+R VL
Sbjct: 184 ITAPLRFFPKDYVREFMAESVSFVLRNAPNGQQIEGVRNVL 224
>tpg|DAA53121.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 883
Score = 148 bits (373), Expect = 8e-34
Identities = 69/101 (68%), Positives = 86/101 (85%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R S+L+ LL G DR+PEI+EQ+F SWSYIMMYLQKYL+KD V +L+
Sbjct: 124 RDILEDFLPFLGRHASALLSLLNDGGDRDPEILEQVFTSWSYIMMYLQKYLVKDTVQILR 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LR++PKDYV+EFMAESVSF+LRNAP QL +G+ KVL
Sbjct: 184 ITAALRYFPKDYVREFMAESVSFLLRNAPNNQLTQGLLKVL 224
>tpg|DAA53120.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 914
Score = 148 bits (373), Expect = 8e-34
Identities = 69/101 (68%), Positives = 86/101 (85%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R S+L+ LL G DR+PEI+EQ+F SWSYIMMYLQKYL+KD V +L+
Sbjct: 124 RDILEDFLPFLGRHASALLSLLNDGGDRDPEILEQVFTSWSYIMMYLQKYLVKDTVQILR 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LR++PKDYV+EFMAESVSF+LRNAP QL +G+ KVL
Sbjct: 184 ITAALRYFPKDYVREFMAESVSFLLRNAPNNQLTQGLLKVL 224
>tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 2530
Score = 148 bits (373), Expect = 8e-34
Identities = 69/101 (68%), Positives = 86/101 (85%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R S+L+ LL G DR+PEI+EQ+F SWSYIMMYLQKYL+KD V +L+
Sbjct: 140 RDILEDFLPFLGRHASALLSLLNDGGDRDPEILEQVFTSWSYIMMYLQKYLVKDTVQILR 199
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LR++PKDYV+EFMAESVSF+LRNAP QL +G+ KVL
Sbjct: 200 ITAALRYFPKDYVREFMAESVSFLLRNAPNNQLTQGLLKVL 240
>ref|XP_002455848.1| hypothetical protein SORBIDRAFT_03g026150 [Sorghum bicolor]
gi|241927823|gb|EES00968.1| hypothetical protein
SORBIDRAFT_03g026150 [Sorghum bicolor]
Length = 892
Score = 148 bits (373), Expect = 8e-34
Identities = 69/101 (68%), Positives = 86/101 (85%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R S+L+ LL G DR+PEI+EQ+F SWSYIMMYLQKYL+KD V +L+
Sbjct: 124 RDILEDFLPFLGRHASALLSLLNDGGDRDPEILEQVFTSWSYIMMYLQKYLVKDTVQILR 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LR++PKDYV+EFMAESVSF+LRNAP QL +G+ KVL
Sbjct: 184 ITAALRYFPKDYVREFMAESVSFLLRNAPNNQLTQGLLKVL 224
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago
truncatula] gi|355490698|gb|AES71901.1| Small subunit
processome component-like protein [Medicago truncatula]
Length = 2733
Score = 147 bits (370), Expect = 2e-33
Identities = 69/101 (68%), Positives = 88/101 (87%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLL++F+P RIV SL LL+SGADREP+IIEQIF SWSY+MMYLQKYLI++ VLK
Sbjct: 124 RDLLDEFIPLFPRIVDSLASLLESGADREPDIIEQIFTSWSYVMMYLQKYLIRNPSEVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VTS+LR+YPK+YV++FMAE++SFVLRNAP +QL +GI +V+
Sbjct: 184 VTSKLRYYPKEYVRQFMAEAMSFVLRNAPDVQLKRGIERVI 224
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 146 bits (368), Expect = 3e-33
Identities = 71/101 (70%), Positives = 87/101 (86%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDL+++F+P RIV SL LL+SGADREP+IIEQIF SWSYIMMYLQKYLI + VLK
Sbjct: 124 RDLVDEFVPLFPRIVDSLASLLESGADREPDIIEQIFTSWSYIMMYLQKYLILNTSEVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
VTS+LR+YPK+YVQ+FMAE++SFVLRNAP QL +GIR+V+
Sbjct: 184 VTSKLRYYPKEYVQQFMAEAMSFVLRNAPDEQLKRGIRRVI 224
>ref|XP_004969406.1| PREDICTED: small subunit processome component 20 homolog [Setaria
italica]
Length = 2708
Score = 145 bits (365), Expect = 7e-33
Identities = 65/101 (64%), Positives = 85/101 (84%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RD+LEDFLPFL R + ++ LL G DR+PE++EQ+F SWSYIMMYLQKYL+KD+V +L+
Sbjct: 124 RDILEDFLPFLGRHANGILALLNDGGDRDPEVLEQVFTSWSYIMMYLQKYLVKDIVQILR 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T+ LR++PKDYV+EFMAESVSF+LRNAP QL +G+ K L
Sbjct: 184 ITAALRYFPKDYVREFMAESVSFLLRNAPNNQLTQGLMKFL 224
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 144 bits (364), Expect = 9e-33
Identities = 69/101 (68%), Positives = 87/101 (86%)
Frame = -2
Query: 305 RDLLEDFLPFLQRIVSSLVFLLKSGADREPEIIEQIFLSWSYIMMYLQKYLIKDVVHVLK 126
RDLL+DFL FL RI SLV LL+SGADREP+I+EQIF SWS+IMMYLQKYLI+D++ VLK
Sbjct: 124 RDLLKDFLLFLPRIADSLVSLLESGADREPDIVEQIFTSWSFIMMYLQKYLIQDIISVLK 183
Query: 125 VTSRLRFYPKDYVQEFMAESVSFVLRNAPTIQLIKGIRKVL 3
+T +LR+Y KDY+QEFMAE+ SF+LRNAP +L GI+K++
Sbjct: 184 ITVKLRYYSKDYIQEFMAEATSFLLRNAPFKKLKAGIQKIM 224