BLASTX nr result
ID: Catharanthus23_contig00036829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00036829
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362392.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 100 3e-19
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ... 97 2e-18
gb|EMJ18188.1| hypothetical protein PRUPE_ppa002640mg [Prunus pe... 95 1e-17
ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_002520592.1| pentatricopeptide repeat-containing protein,... 92 5e-17
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 84 2e-14
ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|EXC35004.1| hypothetical protein L484_017705 [Morus notabilis] 84 2e-14
ref|XP_002322556.1| hypothetical protein POPTR_0016s02110g [Popu... 83 4e-14
gb|ESW06839.1| hypothetical protein PHAVU_010G081100g [Phaseolus... 80 3e-13
ref|XP_004964184.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
gb|EOX93361.1| Tetratricopeptide repeat-like superfamily protein... 80 4e-13
gb|EMT26142.1| hypothetical protein F775_09158 [Aegilops tauschii] 79 8e-13
ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006429754.1| hypothetical protein CICLE_v10011150mg [Citr... 76 5e-12
ref|XP_006664504.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [A... 74 2e-11
>ref|XP_006362392.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Solanum tuberosum]
gi|565393459|ref|XP_006362393.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Solanum tuberosum]
gi|565393461|ref|XP_006362394.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X3 [Solanum tuberosum]
gi|565393463|ref|XP_006362395.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X4 [Solanum tuberosum]
gi|565393465|ref|XP_006362396.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X5 [Solanum tuberosum]
Length = 742
Score = 101 bits (251), Expect = 1e-19
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M KA+E+FE +G+RN++SWNSLISGY QNG +VDALK + + RDGKKPD STF
Sbjct: 396 VGQMEKALEIFENMGERNVISWNSLISGYTQNGFYVDALKYFITMTRDGKKPDHSTFAST 455
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
E +GKQLH +K+G
Sbjct: 456 LSSCSNLAAEHIGKQLHQAAIKTG 479
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 99.8 bits (247), Expect = 3e-19
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M KA+E+F+ +G+RN++SWNSLISGY QNG +VDALK + + RDGKKPD STF
Sbjct: 2324 VGQMEKALEIFKNMGERNVISWNSLISGYTQNGFYVDALKYFITMTRDGKKPDHSTFAST 2383
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
E +GKQLH +K+G
Sbjct: 2384 LSSCSNLAAEHIGKQLHQAAIKTG 2407
>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 907
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/83 (55%), Positives = 61/83 (73%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G M +A E+FE +G RN++SWNSLI+G+ QNGL++DALK +VL+ ++GKKPDQSTF
Sbjct: 404 GEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSL 463
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
QVGKQLH+ I+KSG
Sbjct: 464 SSCANLAALQVGKQLHELILKSG 486
>gb|EMJ18188.1| hypothetical protein PRUPE_ppa002640mg [Prunus persica]
Length = 649
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M KA+++FE +G+R+IVSWNSLI+G+ QNGL++DALK IV++ ++GK+PD+STF
Sbjct: 324 VGQMDKALKIFEEMGERSIVSWNSLITGFVQNGLYLDALKSIVMMGQEGKRPDESTFACG 383
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
QVGKQLH +VK G
Sbjct: 384 LSACANLAALQVGKQLHHLVVKGG 407
>ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Fragaria vesca subsp. vesca]
Length = 739
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M KA+++FE +G++N VSWNSLI+GY QNGL++DAL+ V++ R+GK+PDQSTF
Sbjct: 399 VGEMDKALQIFEQMGEKNTVSWNSLITGYVQNGLYLDALESTVVMGREGKRPDQSTFSSG 458
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
QVG+QLH +VK+G
Sbjct: 459 LSACANLAALQVGRQLHHLVVKTG 482
>ref|XP_002520592.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540252|gb|EEF41825.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 525
Score = 92.4 bits (228), Expect = 5e-17
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M +A+++F+ +G+RN+VSWNSLISG+ +G+++DAL C VL+ +GKKPDQSTF
Sbjct: 363 VGQMERALKVFKEMGERNLVSWNSLISGFMLHGMYLDALWCFVLMQHEGKKPDQSTFACA 422
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
QVG+QLH ++KSG
Sbjct: 423 LSSCAIVAALQVGRQLHHLVIKSG 446
>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G M +A E+F+ + ++NIVSWNSLI+G+ QN L++DALK +V++ ++GKKPDQSTF
Sbjct: 404 GQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTL 463
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
QVG QLH+ I+KSG
Sbjct: 464 SACANLAALQVGNQLHEYILKSG 486
>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M A+++FE + ++NIVSWNSLISG QNG ++DALK +L+ +G+KPDQSTF
Sbjct: 401 VGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACG 460
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
QVGKQLH ++KSG
Sbjct: 461 LSSCAHLAALQVGKQLHQLVMKSG 484
>ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G M KA+EMF + +RN+VSWNSLI+GY QNGL+ +AL C +L+ + G+KPDQ+T
Sbjct: 402 GQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCL 461
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
VG QLH +K+G
Sbjct: 462 RASANLAALNVGVQLHHLTIKTG 484
>ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G M KA+EMF + +RN+VSWNSLI+GY QNGL+ +AL C +L+ + G+KPDQ+T
Sbjct: 402 GQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCL 461
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
VG QLH +K+G
Sbjct: 462 RASANLAALNVGVQLHHLTIKTG 484
>gb|EXC35004.1| hypothetical protein L484_017705 [Morus notabilis]
Length = 745
Score = 83.6 bits (205), Expect = 2e-14
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G M KA+++FE +G+RN VSWNSLI+G++QN L++DAL+ +++ ++GK+PD+STF
Sbjct: 400 GQMDKALKIFEEMGKRNAVSWNSLIAGFSQNELYLDALRSFMMMGQEGKRPDESTFACGL 459
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
Q+G+QLH VKSG
Sbjct: 460 SACANIAALQMGEQLHHLAVKSG 482
>ref|XP_002322556.1| hypothetical protein POPTR_0016s02110g [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| hypothetical protein
POPTR_0016s02110g [Populus trichocarpa]
Length = 702
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
VG M +AV++FE +G+R++VSWNSLI+G+ NG ++DALK L+ +GKKPDQ +F
Sbjct: 363 VGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACG 422
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
QVG QLH +VK G
Sbjct: 423 LSSCATIAALQVGNQLHQVVVKGG 446
>gb|ESW06839.1| hypothetical protein PHAVU_010G081100g [Phaseolus vulgaris]
Length = 748
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G+M +A ++F+ + ++N+VSWNSLI+G+ QN L+ D+LK +V++ + G KPDQST
Sbjct: 404 GHMDRATKIFQAMREKNLVSWNSLIAGFLQNNLYSDSLKSLVMMGQLGNKPDQSTLACGL 463
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
QVGKQLH+ I+KSG
Sbjct: 464 SACANLAALQVGKQLHEYILKSG 486
>ref|XP_004964184.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Setaria italica]
Length = 701
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/83 (48%), Positives = 53/83 (63%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G MRKAV +F+ + +RN VSWNS+ISG+ QNGL VDAL +L+ RD K+ D ST+
Sbjct: 405 GQMRKAVGIFKKMNRRNTVSWNSVISGFVQNGLFVDALHHFMLMRRDTKRADWSTYASCL 464
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
QVG+Q H +V+SG
Sbjct: 465 SACANLAALQVGRQFHSLLVRSG 487
>gb|EOX93361.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 747
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
+G M KAV++FE + RN+VSWNSLI+G+ QNGL DAL L+ +G PD STF
Sbjct: 401 IGEMDKAVKIFEEMKVRNVVSWNSLITGFLQNGLSFDALNSFKLMAHEGTIPDHSTFACG 460
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
QVGKQ+H+ ++K+G
Sbjct: 461 LSACANLAALQVGKQMHNMVLKTG 484
>gb|EMT26142.1| hypothetical protein F775_09158 [Aegilops tauschii]
Length = 700
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G MRKAV +F + QRN+VSWNS+ISG+ QNGL ++AL+ +L+ RD K D ST+
Sbjct: 404 GQMRKAVGIFRKMNQRNVVSWNSVISGFVQNGLCLEALQYFLLMRRDAKMADWSTYACCL 463
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
QVG+Q H +V+SG
Sbjct: 464 SACADLAALQVGRQFHCLLVRSG 486
>ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G MRKAV +F + QRN VSWNS+ISG+ QNGL V+AL+ VL+ RD K+ D ST+
Sbjct: 398 GQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCL 457
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
VG+Q H + +SG
Sbjct: 458 SACADLAALHVGRQFHSLLARSG 480
>ref|XP_006429754.1| hypothetical protein CICLE_v10011150mg [Citrus clementina]
gi|568855508|ref|XP_006481346.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like [Citrus sinensis]
gi|557531811|gb|ESR42994.1| hypothetical protein
CICLE_v10011150mg [Citrus clementina]
Length = 740
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQR-NIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXX 177
+G M AV++FE +G+R N VSWNSLIS + QN H+DALK VL+ ++GKK D ST
Sbjct: 401 IGQMDDAVKIFEEMGKRRNTVSWNSLISSFLQNEFHLDALKIFVLMTQEGKKADHSTLAC 460
Query: 178 XXXXXXXXXXEQVGKQLHDTIVKSG 252
Q+G+Q+H +KSG
Sbjct: 461 ALSACAHLAALQLGRQIHHLAIKSG 485
>ref|XP_006664504.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Oryza brachyantha]
Length = 799
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 4 GNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXXX 183
G +RKA +F + +RN VSWNS+ISG+ QNGL V+AL+ +L+ RD + D ST+
Sbjct: 400 GQIRKAASVFRKMNRRNTVSWNSIISGFVQNGLFVEALQYFMLMRRDARSADWSTYASCL 459
Query: 184 XXXXXXXXEQVGKQLHDTIVKSG 252
VG+Q H +V+SG
Sbjct: 460 SACANLAYLHVGRQFHSLLVRSG 482
>ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [Amborella trichopoda]
gi|548839216|gb|ERM99509.1| hypothetical protein
AMTR_s00088p00046280 [Amborella trichopoda]
Length = 602
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +1
Query: 1 VGNMRKAVEMFELIGQRNIVSWNSLISGYAQNGLHVDALKCIVLLMRDGKKPDQSTFXXX 180
+GNM+KA +MFE + ++N+VSWNS+ISG QNGL+++AL V ++R +K + +T+
Sbjct: 401 IGNMQKAQKMFEEMREKNVVSWNSVISGCTQNGLYIEALNYFVSMLRLHEKLECATYASV 460
Query: 181 XXXXXXXXXEQVGKQLHDTIVKSG 252
Q GKQ+H I+KSG
Sbjct: 461 LSACSGLAALQCGKQVHGLIIKSG 484