BLASTX nr result
ID: Catharanthus23_contig00036693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00036693
(274 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33
ref|XP_006350309.1| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33
ref|XP_004247300.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33
ref|NP_671862.1| pentatricopeptide repeat-containing protein [Ar... 137 2e-30
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,... 136 3e-30
ref|XP_006467094.1| PREDICTED: pentatricopeptide repeat-containi... 135 6e-30
ref|XP_006425269.1| hypothetical protein CICLE_v10026953mg [Citr... 135 6e-30
ref|XP_006297198.1| hypothetical protein CARUB_v10013206mg [Caps... 135 7e-30
ref|XP_006573520.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_006409291.1| hypothetical protein EUTSA_v10022597mg [Eutr... 134 1e-29
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
gb|EOX90638.1| Pentatricopeptide repeat-containing protein, puta... 134 2e-29
ref|XP_004308566.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
gb|ESW30011.1| hypothetical protein PHAVU_002G117300g [Phaseolus... 133 2e-29
ref|XP_004512279.1| PREDICTED: pentatricopeptide repeat-containi... 133 3e-29
ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ... 131 8e-29
ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arab... 130 1e-28
gb|EXC26653.1| hypothetical protein L484_000875 [Morus notabilis] 125 4e-27
gb|EPS63569.1| hypothetical protein M569_11215, partial [Genlise... 108 6e-22
ref|XP_006855710.1| hypothetical protein AMTR_s00044p00145070 [A... 96 4e-18
>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 147 bits (372), Expect = 1e-33
Identities = 69/91 (75%), Positives = 82/91 (90%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNF HNQS+YRALIHKLC FRRF+ V+++LDEMPSSIGS PDE IFVTIVRGLGR M++
Sbjct: 121 PNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVR 180
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
Q+I VLDL++KFG+ PSLK++NSILDVLVKE
Sbjct: 181 QMIKVLDLITKFGENPSLKIFNSILDVLVKE 211
>ref|XP_006350309.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Solanum tuberosum]
Length = 622
Score = 146 bits (369), Expect = 2e-33
Identities = 75/90 (83%), Positives = 79/90 (87%)
Frame = +1
Query: 4 NFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIKQ 183
NFTHNQS+YRALI LC FRRFD V LLDEMPSSIGSTPDEDIFVTIVRGLGR MIKQ
Sbjct: 59 NFTHNQSTYRALIRMLCNFRRFDCVHHLLDEMPSSIGSTPDEDIFVTIVRGLGRTGMIKQ 118
Query: 184 VISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
VI + +LVSKF KKP+LKLYNSILDVLVKE
Sbjct: 119 VIKIPELVSKFEKKPTLKLYNSILDVLVKE 148
>ref|XP_004247300.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Solanum lycopersicum]
Length = 628
Score = 145 bits (367), Expect = 4e-33
Identities = 72/90 (80%), Positives = 80/90 (88%)
Frame = +1
Query: 4 NFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIKQ 183
NFTHN S+YRA+IHKLC FRRFD V LL+EMPSSIGSTPDEDIFVTIVRGLGR MIKQ
Sbjct: 65 NFTHNHSTYRAIIHKLCNFRRFDCVHHLLNEMPSSIGSTPDEDIFVTIVRGLGRAGMIKQ 124
Query: 184 VISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
+I + +LVSKF KKP+LKLYN+ILDVLVKE
Sbjct: 125 LIKIPELVSKFEKKPTLKLYNAILDVLVKE 154
>ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17525, mitochondrial; Flags: Precursor
gi|330251547|gb|AEC06641.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 626
Score = 137 bits (344), Expect = 2e-30
Identities = 66/91 (72%), Positives = 77/91 (84%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P F H++S+YRAL HKLC+FRRFD V LLDEMP SIG PD+ IFVTI+RG GR +IK
Sbjct: 70 PGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIK 129
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
+VISV+DLVSKFG KPSLK++NSILDVLVKE
Sbjct: 130 RVISVVDLVSKFGIKPSLKVFNSILDVLVKE 160
>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 629
Score = 136 bits (343), Expect = 3e-30
Identities = 65/90 (72%), Positives = 75/90 (83%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P FTH+QS+YRALI KLC F RFD V LLDEMP +IGS PDE+IF+T++RGLGR MI
Sbjct: 66 PKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIP 125
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVK 270
VI VLDL+SKFGK PSLK++NSILDVLVK
Sbjct: 126 HVIKVLDLISKFGKNPSLKIFNSILDVLVK 155
>ref|XP_006467094.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Citrus sinensis]
Length = 618
Score = 135 bits (340), Expect = 6e-30
Identities = 63/91 (69%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNFTH++S+YRALIHKLC FRRFD V++LLDEMP SI S PDE IF+T++RGLGR MI
Sbjct: 62 PNFTHSRSTYRALIHKLCTFRRFDTVKELLDEMPHSIQSPPDESIFITVIRGLGRARMIN 121
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
V+ DLVS+F PSLK++NSILDVLVKE
Sbjct: 122 DVVKATDLVSRFNMTPSLKIFNSILDVLVKE 152
>ref|XP_006425269.1| hypothetical protein CICLE_v10026953mg [Citrus clementina]
gi|557527259|gb|ESR38509.1| hypothetical protein
CICLE_v10026953mg [Citrus clementina]
Length = 621
Score = 135 bits (340), Expect = 6e-30
Identities = 63/91 (69%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNFTH++S+YRALIHKLC FRRFD V++LLDEMP SI S PDE IF+T++RGLGR MI
Sbjct: 62 PNFTHSRSTYRALIHKLCTFRRFDTVKELLDEMPHSIQSPPDESIFITVIRGLGRARMIN 121
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
V+ DLVS+F PSLK++NSILDVLVKE
Sbjct: 122 DVVKATDLVSRFNMTPSLKIFNSILDVLVKE 152
>ref|XP_006297198.1| hypothetical protein CARUB_v10013206mg [Capsella rubella]
gi|482565907|gb|EOA30096.1| hypothetical protein
CARUB_v10013206mg [Capsella rubella]
Length = 629
Score = 135 bits (339), Expect = 7e-30
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P F H++S+YRAL HKLC+FRRFD V LLDEMP SIG PD+ IFVTI+RG GR + K
Sbjct: 73 PGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPESIGLPPDDAIFVTIIRGFGRARLTK 132
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
+VISV+DLVSKFG KPSLK++NSILDVLVKE
Sbjct: 133 RVISVVDLVSKFGIKPSLKVFNSILDVLVKE 163
>ref|XP_006573520.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like isoform X2 [Glycine max]
Length = 507
Score = 134 bits (338), Expect = 1e-29
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNF H+QS+YRALIHKLC FRRFD V+ LLDEMP S+G+ P +DIF+TI+RGLGR M +
Sbjct: 63 PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTR 122
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
VI VLDLV KF PSLK++NSILDVLVKE
Sbjct: 123 TVIKVLDLVYKFHGSPSLKIFNSILDVLVKE 153
>ref|XP_006409291.1| hypothetical protein EUTSA_v10022597mg [Eutrema salsugineum]
gi|557110453|gb|ESQ50744.1| hypothetical protein
EUTSA_v10022597mg [Eutrema salsugineum]
Length = 629
Score = 134 bits (338), Expect = 1e-29
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P F H++S+YRAL HKLC+FRRF+ V LLDEMP SIG PD+ IF+TIVRG GR + K
Sbjct: 73 PGFIHSRSTYRALFHKLCVFRRFETVYQLLDEMPGSIGLPPDDAIFITIVRGFGRAKLTK 132
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
QVISV+DLVSKFG KPSLK++NSILDVLVKE
Sbjct: 133 QVISVVDLVSKFGIKPSLKVFNSILDVLVKE 163
>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like isoform X1 [Glycine max]
Length = 618
Score = 134 bits (338), Expect = 1e-29
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNF H+QS+YRALIHKLC FRRFD V+ LLDEMP S+G+ P +DIF+TI+RGLGR M +
Sbjct: 63 PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTR 122
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
VI VLDLV KF PSLK++NSILDVLVKE
Sbjct: 123 TVIKVLDLVYKFHGSPSLKIFNSILDVLVKE 153
>gb|EOX90638.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 639
Score = 134 bits (336), Expect = 2e-29
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNFTH+QS+YRALIHKLC FR F+ V +LLDEMP+S+G PDEDI V +VRGLGR M++
Sbjct: 76 PNFTHSQSTYRALIHKLCAFRCFNTVNELLDEMPTSLGVPPDEDILVALVRGLGRARMVR 135
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
VI VLDL SKF PSLK++NSILDVLVKE
Sbjct: 136 NVIKVLDLASKFHNTPSLKIFNSILDVLVKE 166
>ref|XP_004308566.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 612
Score = 134 bits (336), Expect = 2e-29
Identities = 61/91 (67%), Positives = 76/91 (83%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P+FTH+ S+YRALIHKLC FRRFD +LDEMP SIG PDE IFVT++ GLGR H++K
Sbjct: 49 PSFTHSPSTYRALIHKLCTFRRFDTAYQVLDEMPRSIGQPPDEHIFVTLIHGLGRAHLVK 108
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
Q I VLDLV+++ +KPSLK++NSILDVLV+E
Sbjct: 109 QAIKVLDLVARYNQKPSLKIFNSILDVLVQE 139
>gb|ESW30011.1| hypothetical protein PHAVU_002G117300g [Phaseolus vulgaris]
Length = 626
Score = 133 bits (335), Expect = 2e-29
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNF H+QS+YRALIHKLC FRRFD V+ LLDEMP S+G+ P++ IFVTI+RGLGR MI+
Sbjct: 71 PNFAHSQSTYRALIHKLCTFRRFDTVKQLLDEMPQSLGAPPNDAIFVTIIRGLGRARMIR 130
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
VI VLDL KF PSLK++NSILDVLVKE
Sbjct: 131 TVIKVLDLAYKFHGSPSLKIFNSILDVLVKE 161
>ref|XP_004512279.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Cicer arietinum]
Length = 623
Score = 133 bits (334), Expect = 3e-29
Identities = 64/89 (71%), Positives = 76/89 (85%)
Frame = +1
Query: 7 FTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIKQV 186
FTH+QS+YRALIHKLCIFRRFD V+ LLDEMPSSIG++P +DIF+TIVRGL R M ++V
Sbjct: 69 FTHSQSTYRALIHKLCIFRRFDTVKQLLDEMPSSIGASPSDDIFITIVRGLSRARMTRRV 128
Query: 187 ISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
I V+DL KF PSLK++NSILDVLVKE
Sbjct: 129 IKVVDLAYKFHGTPSLKIFNSILDVLVKE 157
>ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 131 bits (330), Expect = 8e-29
Identities = 64/89 (71%), Positives = 75/89 (84%)
Frame = +1
Query: 7 FTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIKQV 186
FTH+QS+YR LIHKLCIFRRFD V+ LLDEMP+SIG+ P EDIF+TIVRGL R M ++V
Sbjct: 67 FTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRV 126
Query: 187 ISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
I+VLDL KF PSLK++NSILDVLVKE
Sbjct: 127 ITVLDLAYKFHGTPSLKIFNSILDVLVKE 155
>ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata] gi|297329905|gb|EFH60324.1| hypothetical protein
ARALYDRAFT_343373 [Arabidopsis lyrata subsp. lyrata]
Length = 1056
Score = 130 bits (328), Expect = 1e-28
Identities = 63/91 (69%), Positives = 75/91 (82%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P F H++S+YRAL +KLC+FRRFD V LLDEMP S G PD+ IFVTI+RG GR + K
Sbjct: 58 PGFIHSRSTYRALFYKLCVFRRFDTVYQLLDEMPESTGLPPDDAIFVTIIRGFGRARLTK 117
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
+VISV+DLVSKFG KPSLK++NSILDVLVKE
Sbjct: 118 RVISVVDLVSKFGIKPSLKVFNSILDVLVKE 148
>gb|EXC26653.1| hypothetical protein L484_000875 [Morus notabilis]
Length = 626
Score = 125 bits (315), Expect = 4e-27
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
PNF H+ S+Y +LIHKLCIFRRFD LLDEMP+S+GS PD+D FVT++RGL R M +
Sbjct: 64 PNFRHSHSTYCSLIHKLCIFRRFDAAHQLLDEMPTSLGSPPDDDTFVTLIRGLARARMTR 123
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
+V++VLDL KF +PSLK++NSIL+VLVKE
Sbjct: 124 RVLNVLDLAYKFHARPSLKIFNSILNVLVKE 154
>gb|EPS63569.1| hypothetical protein M569_11215, partial [Genlisea aurea]
Length = 521
Score = 108 bits (271), Expect = 6e-22
Identities = 53/91 (58%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P F H +S+YRALIHKLC FR+F++V LLDEMP +IGS P +DIF+T+VRG GR MI+
Sbjct: 31 PGFIHTRSTYRALIHKLCTFRQFEVVDQLLDEMPKAIGSVPGDDIFITLVRGFGRAGMIR 90
Query: 181 QVISVLDLVSKFGKK-PSLKLYNSILDVLVK 270
++I +L+ ++F + P+L+L NSILDVLVK
Sbjct: 91 EIIRMLE--TRFRESAPTLRLLNSILDVLVK 119
>ref|XP_006855710.1| hypothetical protein AMTR_s00044p00145070 [Amborella trichopoda]
gi|548859497|gb|ERN17177.1| hypothetical protein
AMTR_s00044p00145070 [Amborella trichopoda]
Length = 616
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 1 PNFTHNQSSYRALIHKLCIFRRFDIVRDLLDEMPSSIGSTPDEDIFVTIVRGLGRGHMIK 180
P+F H S+YRALIHKLC F F ++ E+P S+ S P EDIF+T+++G G
Sbjct: 64 PHFLHTNSTYRALIHKLCSFCSFPTAIKVIREIPISLKSPPSEDIFLTLIKGYGSAKTGN 123
Query: 181 QVISVLDLVSKFGKKPSLKLYNSILDVLVKE 273
+ I VLDL+++ G KPSLK+YNSIL+VLV+E
Sbjct: 124 KAIQVLDLMTQCGIKPSLKVYNSILNVLVRE 154