BLASTX nr result
ID: Catharanthus23_contig00035819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00035819
(427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|2235463... 62 6e-10
gb|EOY32220.1| Leucine-rich repeat/extensin 2 [Theobroma cacao] 59 4e-09
ref|XP_002331387.1| predicted protein [Populus trichocarpa] 57 9e-09
ref|XP_006372265.1| hypothetical protein POPTR_0018s14790g [Popu... 57 9e-09
ref|XP_006851043.1| hypothetical protein AMTR_s00025p00231840 [A... 60 3e-08
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi... 54 3e-08
dbj|BAF48665.1| leucine-rich repeat/extensin 1 [Nicotiana tabacum] 54 3e-08
ref|XP_002888025.1| hypothetical protein ARALYDRAFT_475099 [Arab... 55 3e-08
gb|EXC16249.1| Leucine-rich repeat extensin-like protein 2 [Moru... 58 5e-08
ref|NP_176434.1| leucine-rich repeat extensin-like protein 2 [Ar... 54 7e-08
sp|O48809.1|LRX2_ARATH RecName: Full=Leucine-rich repeat extensi... 54 7e-08
ref|XP_002308141.1| predicted protein [Populus trichocarpa] 57 7e-08
ref|XP_006391867.1| hypothetical protein EUTSA_v10023291mg [Eutr... 53 2e-07
ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like... 52 2e-07
gb|EPS58069.1| hypothetical protein M569_16746, partial [Genlise... 54 3e-07
ref|XP_006414930.1| hypothetical protein EUTSA_v100275740mg, par... 53 3e-07
ref|XP_006494306.1| PREDICTED: pollen-specific leucine-rich repe... 56 4e-07
ref|XP_006406541.1| hypothetical protein EUTSA_v10022433mg, part... 55 4e-07
ref|XP_006303848.1| hypothetical protein CARUB_v10012584mg [Caps... 56 6e-07
ref|XP_004139428.1| PREDICTED: leucine-rich repeat extensin-like... 57 7e-07
>ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|223546391|gb|EEF47892.1| LRX2,
putative [Ricinus communis]
Length = 766
Score = 62.0 bits (149), Expect(2) = 6e-10
Identities = 30/42 (71%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
N CSY GV C+PSP N IRVV GIDLNH DIAGY PPE L
Sbjct: 79 NVCSYMGVFCAPSPSNPKIRVVAGIDLNHADIAGYLPPELGL 120
Score = 26.9 bits (58), Expect(2) = 6e-10
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDPFNFT+NW
Sbjct: 66 SDPFNFTTNW 75
>gb|EOY32220.1| Leucine-rich repeat/extensin 2 [Theobroma cacao]
Length = 748
Score = 59.3 bits (142), Expect(2) = 4e-09
Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 151 DTQNACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPE 273
D + CSY G+ C+PSP N IRVV GIDLNH DIAGY PPE
Sbjct: 75 DGPDVCSYMGIYCAPSPSNPKIRVVAGIDLNHADIAGYLPPE 116
Score = 26.9 bits (58), Expect(2) = 4e-09
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDPFNFT+NW
Sbjct: 65 SDPFNFTANW 74
>ref|XP_002331387.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 57.4 bits (137), Expect(2) = 9e-09
Identities = 28/42 (66%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSY GV C+PSP N IRVV GIDLNH DIAGY P E L
Sbjct: 77 DVCSYMGVFCAPSPKNKKIRVVAGIDLNHADIAGYLPTELGL 118
Score = 27.7 bits (60), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDPFNFT+NW
Sbjct: 57 SWKQAIFSDPFNFTANW 73
>ref|XP_006372265.1| hypothetical protein POPTR_0018s14790g [Populus trichocarpa]
gi|550318796|gb|ERP50062.1| hypothetical protein
POPTR_0018s14790g [Populus trichocarpa]
Length = 461
Score = 57.4 bits (137), Expect(2) = 9e-09
Identities = 28/42 (66%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSY GV C+PSP N IRVV GIDLNH DIAGY P E L
Sbjct: 77 DVCSYMGVFCAPSPKNKKIRVVAGIDLNHADIAGYLPTELGL 118
Score = 27.7 bits (60), Expect(2) = 9e-09
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDPFNFT+NW
Sbjct: 57 SWKQAIFSDPFNFTANW 73
>ref|XP_006851043.1| hypothetical protein AMTR_s00025p00231840 [Amborella trichopoda]
gi|548854714|gb|ERN12624.1| hypothetical protein
AMTR_s00025p00231840 [Amborella trichopoda]
Length = 204
Score = 60.1 bits (144), Expect(2) = 3e-08
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ C YNGV C+PSP +SS+ VV GIDLNH DIAGY PPE L
Sbjct: 79 DVCHYNGVFCAPSPSDSSLNVVAGIDLNHADIAGYLPPELGL 120
Score = 23.5 bits (49), Expect(2) = 3e-08
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 92 LKSSTSHVLSSDPFNFTSNW 151
L++ + SDPFN T NW
Sbjct: 56 LQTWKKFAIFSDPFNQTGNW 75
>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
gi|127058167|dbj|BAF48664.1| leucine-rich
repeat/extensin [Nicotiana plumbaginifolia]
Length = 725
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 28/42 (66%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
N CSY GV C+ S N SIRVV GIDLNH DIAGY PE L
Sbjct: 79 NVCSYGGVFCAQSLTNDSIRVVAGIDLNHADIAGYLVPELGL 120
Score = 28.9 bits (63), Expect(2) = 3e-08
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 122 SDPFNFTSNWT 154
SDPFNFT+NWT
Sbjct: 66 SDPFNFTANWT 76
>dbj|BAF48665.1| leucine-rich repeat/extensin 1 [Nicotiana tabacum]
Length = 723
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 28/42 (66%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
N CSY GV C+ S N SIRVV GIDLNH DIAGY PE L
Sbjct: 79 NVCSYGGVFCAQSLTNDSIRVVAGIDLNHADIAGYLVPELGL 120
Score = 28.9 bits (63), Expect(2) = 3e-08
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 122 SDPFNFTSNWT 154
SDPFNFT+NWT
Sbjct: 66 SDPFNFTANWT 76
>ref|XP_002888025.1| hypothetical protein ARALYDRAFT_475099 [Arabidopsis lyrata subsp.
lyrata] gi|297333866|gb|EFH64284.1| hypothetical protein
ARALYDRAFT_475099 [Arabidopsis lyrata subsp. lyrata]
Length = 713
Score = 55.5 bits (132), Expect(2) = 3e-08
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSYNG+ CSPSP + RVV GIDLNH D+AGY P E L
Sbjct: 55 DVCSYNGIFCSPSPSSPKTRVVAGIDLNHADMAGYLPRELGL 96
Score = 27.7 bits (60), Expect(2) = 3e-08
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDPFNFT+NW
Sbjct: 35 SWKQAIFSDPFNFTANW 51
>gb|EXC16249.1| Leucine-rich repeat extensin-like protein 2 [Morus notabilis]
Length = 789
Score = 57.8 bits (138), Expect(2) = 5e-08
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSY+GV C+P P N +RVV G+DLNH DIAGY PPE L
Sbjct: 79 DVCSYSGVFCAPFPANPKLRVVSGVDLNHADIAGYLPPELGL 120
Score = 24.6 bits (52), Expect(2) = 5e-08
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDP NFT+NW
Sbjct: 66 SDPLNFTANW 75
>ref|NP_176434.1| leucine-rich repeat extensin-like protein 2 [Arabidopsis thaliana]
gi|332195847|gb|AEE33968.1| leucine-rich repeat/extensin
2 [Arabidopsis thaliana]
Length = 826
Score = 54.3 bits (129), Expect(2) = 7e-08
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSYNG+ C+PSP + RVV GIDLNH D+AGY P E L
Sbjct: 122 DVCSYNGIFCAPSPSSPKTRVVAGIDLNHADMAGYLPRELGL 163
Score = 27.7 bits (60), Expect(2) = 7e-08
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDPFNFT+NW
Sbjct: 102 SWKQAIFSDPFNFTANW 118
>sp|O48809.1|LRX2_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 2;
Short=AtLRX2; Short=LRR/EXTENSIN2; AltName: Full=Cell
wall hydroxyproline-rich glycoprotein; Flags: Precursor
gi|5454187|gb|AAD43602.1|AC005698_1 T3P18.1 [Arabidopsis
thaliana] gi|7940282|gb|AAF70841.1|AC003113_8 F24O1.18
[Arabidopsis thaliana]
Length = 786
Score = 54.3 bits (129), Expect(2) = 7e-08
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSYNG+ C+PSP + RVV GIDLNH D+AGY P E L
Sbjct: 82 DVCSYNGIFCAPSPSSPKTRVVAGIDLNHADMAGYLPRELGL 123
Score = 27.7 bits (60), Expect(2) = 7e-08
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDPFNFT+NW
Sbjct: 62 SWKQAIFSDPFNFTANW 78
>ref|XP_002308141.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 56.6 bits (135), Expect(2) = 7e-08
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSY G+ C+PSP N +RVV GIDLNH DIAGY P E L
Sbjct: 78 DVCSYMGIFCAPSPQNKKVRVVAGIDLNHADIAGYLPTELGL 119
Score = 25.4 bits (54), Expect(2) = 7e-08
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDP NFT+NW
Sbjct: 58 SWKQAIYSDPLNFTANW 74
>ref|XP_006391867.1| hypothetical protein EUTSA_v10023291mg [Eutrema salsugineum]
gi|557088373|gb|ESQ29153.1| hypothetical protein
EUTSA_v10023291mg [Eutrema salsugineum]
Length = 778
Score = 53.1 bits (126), Expect(2) = 2e-07
Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPN-SSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSYNG+ C+PSP + RVV GIDLNH D+AGY PPE L
Sbjct: 83 DVCSYNGIYCAPSPSSRQKTRVVAGIDLNHADMAGYLPPELGL 125
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 101 STSHVLSSDPFNFTSNW 151
S + SDPFNFT+NW
Sbjct: 63 SWKQAIFSDPFNFTANW 79
>ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like protein 2-like [Vitis
vinifera]
Length = 610
Score = 52.0 bits (123), Expect(2) = 2e-07
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 166 CSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
CSY GV C+PS N S++VV GIDLNH DIAGY P E L
Sbjct: 75 CSYMGVYCAPSLSNPSLKVVAGIDLNHADIAGYLPSELGL 114
Score = 28.9 bits (63), Expect(2) = 2e-07
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 122 SDPFNFTSNWT-PKMLVLIMVY 184
SDPFNFTSNW P++ + VY
Sbjct: 60 SDPFNFTSNWVGPQVCSYMGVY 81
>gb|EPS58069.1| hypothetical protein M569_16746, partial [Genlisea aurea]
Length = 334
Score = 53.5 bits (127), Expect(2) = 3e-07
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ CSY GV C+PS N S+RVV GIDLNH DIAGY P + L
Sbjct: 38 DVCSYGGVFCAPSLGNGSVRVVAGIDLNHADIAGYLPEKLGL 79
Score = 26.6 bits (57), Expect(2) = 3e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 122 SDPFNFTSNWT 154
SDPFNFT +WT
Sbjct: 25 SDPFNFTESWT 35
>ref|XP_006414930.1| hypothetical protein EUTSA_v100275740mg, partial [Eutrema
salsugineum] gi|557116100|gb|ESQ56383.1| hypothetical
protein EUTSA_v100275740mg, partial [Eutrema
salsugineum]
Length = 400
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 26/42 (61%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
N C+Y GV CSP+ N IR V GIDLNH DIAGY P E L
Sbjct: 94 NVCNYTGVFCSPALDNRRIRTVAGIDLNHADIAGYLPEELGL 135
Score = 26.9 bits (58), Expect(2) = 3e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDPFNFT+NW
Sbjct: 81 SDPFNFTANW 90
>ref|XP_006494306.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
protein 3-like [Citrus sinensis]
Length = 1091
Score = 55.8 bits (133), Expect(2) = 4e-07
Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLN-HDIAGYHPPE 273
+ CSYNGV C+P+P NS+I VV GIDLN +DIAGY P E
Sbjct: 95 DVCSYNGVFCAPAPDNSNITVVAGIDLNGNDIAGYFPAE 133
Score = 23.5 bits (49), Expect(2) = 4e-07
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDPFN T NW
Sbjct: 82 SDPFNTTGNW 91
>ref|XP_006406541.1| hypothetical protein EUTSA_v10022433mg, partial [Eutrema
salsugineum] gi|557107687|gb|ESQ47994.1| hypothetical
protein EUTSA_v10022433mg, partial [Eutrema salsugineum]
Length = 351
Score = 55.5 bits (132), Expect(2) = 4e-07
Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
N CSY GV C+P+ + SI VV GIDLNH DIAGY PPE L
Sbjct: 101 NVCSYKGVFCAPALDDQSIMVVAGIDLNHADIAGYLPPELGL 142
Score = 23.9 bits (50), Expect(2) = 4e-07
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDPFN T+NW
Sbjct: 88 SDPFNTTANW 97
>ref|XP_006303848.1| hypothetical protein CARUB_v10012584mg [Capsella rubella]
gi|482572559|gb|EOA36746.1| hypothetical protein
CARUB_v10012584mg [Capsella rubella]
Length = 852
Score = 56.2 bits (134), Expect(2) = 6e-07
Identities = 26/42 (61%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
N CSYNGV C+P+ N SI VV G+DLNH DI+G+ PPE L
Sbjct: 95 NVCSYNGVFCAPALDNPSINVVAGVDLNHADISGHLPPELGL 136
Score = 22.7 bits (47), Expect(2) = 6e-07
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDPF TSNW
Sbjct: 82 SDPFKTTSNW 91
>ref|XP_004139428.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like
[Cucumis sativus]
Length = 608
Score = 56.6 bits (135), Expect(2) = 7e-07
Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 NACSYNGVLCSPSPPNSSIRVVFGIDLNH-DIAGYHPPETSL 282
+ C Y GV C+P+P NSSIR V GIDLNH DIAGY P E L
Sbjct: 116 DVCHYKGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGL 157
Score = 21.9 bits (45), Expect(2) = 7e-07
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 122 SDPFNFTSNW 151
SDP N T NW
Sbjct: 103 SDPLNLTKNW 112