BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035809
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    92   9e-17
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    90   4e-16
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    86   7e-15
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    84   3e-14
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313...    77   3e-12
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296...    75   1e-11
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              71   2e-10
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              71   2e-10
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    71   2e-10
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              70   2e-10
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A...    70   3e-10
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]    69   4e-10
gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptas...    69   8e-10
gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [...    69   8e-10
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    68   1e-09
gb|EOY32757.1| Uncharacterized protein TCM_040787 [Theobroma cacao]    67   3e-09
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [...    67   3e-09
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   7e-09
gb|EOY04491.1| Non-LTR retroelement reverse transcriptase-like p...    64   2e-08
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t...    62   6e-08

>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/107 (42%), Positives = 69/107 (64%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA+  Q ++   ++  FC+ SGQKV + KS++F S NVS+     +S+  GI  T
Sbjct: 210 LILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSENVSRDLGKLISDESGISST 269

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
           ++LGKYL +P+ QR++N   F  + E++T +L+GWK R LS   + T
Sbjct: 270 RELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVT 316


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/101 (44%), Positives = 68/101 (67%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA+  Q ++   I+ +FC+ SGQKV + KS++F S NVS+     +S   GI  T
Sbjct: 362 LILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSRDLEKLISKESGIKST 421

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
           ++LGKYL +P+ QR++N   F  V E+++++L+GWK R LS
Sbjct: 422 RELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLS 462


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/107 (41%), Positives = 70/107 (65%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA+  Q ++   ++  FC  SGQKV + KS++F S+NVS++    +S   GI  T
Sbjct: 548 LILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCT 607

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
           ++LGKYL +P+ Q+++N + F  V E+++ +L+GWK R LS   + T
Sbjct: 608 KELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRIT 654


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/107 (38%), Positives = 69/107 (64%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA+  Q ++   ++  FC+ SGQKV + KS++F S NV +     +S+  GI  T
Sbjct: 140 LILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFISDESGIKST 199

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
           ++LGKYL +P+ Q+++N   F  +  +++++L+GWK R+LS   + T
Sbjct: 200 KELGKYLGMPVLQKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLT 246


>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
           subsp. vesca]
          Length = 543

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/107 (37%), Positives = 63/107 (58%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           L+LF EAT  QA      + +FC +SGQ +   KS +F S N +K  A ++S   G P T
Sbjct: 260 LMLFAEATEHQAYGLKTCLDNFCAISGQIISYEKSLIFCSPNTTKTMASSISATCGSPLT 319

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
            DLGKYL +PL   +VN   ++ +  ++ ++LS WK+++L+   + T
Sbjct: 320 SDLGKYLGMPLIHSRVNKHTYDAIFYKVQSRLSSWKSKVLNMAGRLT 366


>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
           subsp. vesca]
          Length = 449

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/101 (41%), Positives = 61/101 (60%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA+++Q  +    + +FC LS Q V   KS +F S N SK TA  +SN  G P T
Sbjct: 254 LILFVEASSQQTSLLKTCLDNFCALSRQTVSFEKSLVFCSPNTSKSTASLISNVCGSPLT 313

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
            DLGKYL +PL   +VN   +  + +++  +L  WK+++LS
Sbjct: 314 CDLGKYLGMPLIYDRVNKCTYAGLFDKVQKRLFSWKSKVLS 354


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/101 (39%), Positives = 58/101 (57%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           L+LFGEA+  QA++    + SF   SG KV   KS LF S+NV+     A+ +   +P  
Sbjct: 689 LMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVA 748

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
           + LG YL IP+ + +V+   F  V ++M  KLS WKA  L+
Sbjct: 749 ESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLN 789


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/101 (39%), Positives = 58/101 (57%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           L+LFGEA+  QA++    + SF   SG KV   KS LF S+NV+     A+ +   +P  
Sbjct: 689 LMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVA 748

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
           + LG YL IP+ + +V+   F  V ++M  KLS WKA  L+
Sbjct: 749 ESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLN 789


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 970

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/96 (38%), Positives = 59/96 (61%)
 Frame = +2

Query: 17  EATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHTQDLGK 196
           EA+  Q  +   ++  FC  SGQ V + KS++  SNNVS+     +S   GI  T++LGK
Sbjct: 385 EASVAQILIIRRVLEQFCEASGQNVSLEKSKIVFSNNVSRDMERLISGESGIGCTRELGK 444

Query: 197 YLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
           YL +P+ Q+++N +    V E +++ L+GWK+R LS
Sbjct: 445 YLGMPILQKRMNKETSGEVLEHVSSSLAGWKSRSLS 480


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/101 (39%), Positives = 58/101 (57%)
 Frame = +2

Query: 2    LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
            L+LFGEA+  QA++    + SF   SG KV   KS LF S+NV+     A+ +   +P  
Sbjct: 1221 LMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVA 1280

Query: 182  QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
            + LG YL IP+ + +V+   F  V ++M  KLS WKA  L+
Sbjct: 1281 ESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLN 1321


>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 768

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/107 (35%), Positives = 60/107 (56%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           L+LF EAT+ QA+    ++  FC+ SG KV   K+ ++ S NV    A  +  + G   T
Sbjct: 115 LLLFAEATSGQAQCINSVLGDFCLSSGTKVNQSKTHVYFSKNVPDAVATRIWRDLGYTVT 174

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
           +DLGKYL +PL   +V+ + ++ + ++   KL GW A  LS   + T
Sbjct: 175 KDLGKYLGMPLLHSRVSQQTYQGILDKTDQKLLGWAASQLSLAGRIT 221


>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
          Length = 475

 Score = 68.9 bits (167), Expect(2) = 4e-10
 Identities = 37/101 (36%), Positives = 56/101 (55%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA   +  +  G+   F   S +KV + K+  + S NV      A+S   G  H+
Sbjct: 205 LILFAEALVPRMDVIKGVSNHFRKYSDEKVNVEKTSFYFSKNVGMDIIHAISECSGFSHS 264

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
            +LGKYL +PL + +    +F+ +EE++ N+LS WKA  LS
Sbjct: 265 TNLGKYLGVPLLRGRKKYSLFKYLEEKICNRLSSWKASALS 305



 Score = 20.8 bits (42), Expect(2) = 4e-10
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 334 LLFLPSYSMQ 363
           LL++PSY+MQ
Sbjct: 317 LLYIPSYAMQ 326


>gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptase),
           Polynucleotidyl transferase, Ribonuclease H fold-like
           protein [Theobroma cacao]
          Length = 616

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/85 (41%), Positives = 53/85 (62%)
 Frame = +2

Query: 50  GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHTQDLGKYLRIPLFQRKV 229
           G    F  +SG+KV ++KS  + S NVSK+    L N  G+ ++ +LG YL +PLF  + 
Sbjct: 2   GYTPCFSKISGEKVNVHKSSFYYSANVSKECIENLRNISGLSYSTNLGNYLGVPLFHGRK 61

Query: 230 NIKMFECVEEQMTNKLSGWKARILS 304
            I  F+ +E+++ +KLSGWKA  LS
Sbjct: 62  RITSFKFLEDKVRSKLSGWKAFSLS 86


>gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [Prunus persica]
          Length = 212

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/107 (34%), Positives = 61/107 (57%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LILF EA+ ++A+M  G +  FC  SGQ V   KS +F S N  +  A  +S  +G P T
Sbjct: 24  LILFTEASTQRARMMKGCLDLFCQASGQTVSFDKSTVFCSPNTIRALAQEISFIYGSPLT 83

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
            +LGKYL + +   +V    +  +  ++  +L+ WK+++LS   ++T
Sbjct: 84  DNLGKYLGMHILHSRVTRSTYSSLLSKIHCRLANWKSKLLSSAGRAT 130


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/80 (42%), Positives = 54/80 (67%)
 Frame = +2

Query: 83  QKVIIYKSRLFVSNNVSKQTALALSNNFGIPHTQDLGKYLRIPLFQRKVNIKMFECVEEQ 262
           QKV + KS++F SNNVS+     ++   GI  T++LGKYL +P+ Q+++N   F  V E+
Sbjct: 510 QKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLER 569

Query: 263 MTNKLSGWKARILSRDAKST 322
           ++++LSGWK+R LS   + T
Sbjct: 570 VSSRLSGWKSRSLSLAGRIT 589


>gb|EOY32757.1| Uncharacterized protein TCM_040787 [Theobroma cacao]
          Length = 178

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 35/76 (46%), Positives = 49/76 (64%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           L+LFGEA+ KQ +    ++  FC+ SGQKV + KSR+ VS+NV    A  LS++  IP T
Sbjct: 85  LMLFGEASVKQVQTIMRVLDKFCLASGQKVSLEKSRMLVSSNVPLSKARVLSSDAKIPLT 144

Query: 182 QDLGKYLRIPLFQRKV 229
           +D GKYL  P+   +V
Sbjct: 145 KDFGKYLGSPVIHGRV 160


>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
          Length = 387

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/107 (36%), Positives = 58/107 (54%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           L+LF EA+ KQA++    +  FC +SGQ V   KS +F S N     A  LS   G P T
Sbjct: 60  LVLFAEASTKQAQIMRDCLEKFCSVSGQAVNFDKSAIFCSPNTGNVLAQDLSRICGSPLT 119

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
            +LG YL +P+   KV    +  +  ++ N L+ WK++ LS   ++T
Sbjct: 120 ANLGNYLGMPILHNKVCKDTYGGLVNKVQNCLTLWKSKHLSLAGRAT 166


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/114 (31%), Positives = 61/114 (53%)
 Frame = +2

Query: 2    LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
            LILF EA+ +QA++    +  FC  SG KV   KS+++ S N       A+ N   +  T
Sbjct: 691  LILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEAT 750

Query: 182  QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKSTECNICYS 343
             D GKYL +P    + + + ++ + +++  KL+GWK + LS   ++T     +S
Sbjct: 751  ADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFS 804


>gb|EOY04491.1| Non-LTR retroelement reverse transcriptase-like protein [Theobroma
           cacao]
          Length = 393

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/100 (35%), Positives = 53/100 (53%)
 Frame = +2

Query: 5   ILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHTQ 184
           +LFG  T  Q ++   +I+ FC  SG+KV + KS +FVS+N+    A ALS    I   +
Sbjct: 1   MLFGATTKTQVRVMMQVIQKFCSASGEKVSLNKSEIFVSSNIHSSKAKALSRVARISLIK 60

Query: 185 DLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILS 304
           DL KYL  P+   +V    +  +  ++  KL  W  + LS
Sbjct: 61  DLSKYLGAPMLHGRVTKATYSDLCNKVGRKLEQWSNKFLS 100


>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
           protein [Theobroma cacao]
          Length = 620

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/107 (28%), Positives = 56/107 (52%)
 Frame = +2

Query: 2   LILFGEATNKQAKMY*GIIRSFCMLSGQKVIIYKSRLFVSNNVSKQTALALSNNFGIPHT 181
           LIL  EA+  Q ++  G++  FC     KV I KS  F S NV  +  + + +  G  ++
Sbjct: 262 LILLAEASESQMEVIKGVLEDFCACLRGKVCIAKSTFFCSKNVPMELNIKVKDCSGFSYS 321

Query: 182 QDLGKYLRIPLFQRKVNIKMFECVEEQMTNKLSGWKARILSRDAKST 322
             +GKY+ +PL   +    +++ + +++ ++L  WKA  LS   + T
Sbjct: 322 DSMGKYIGVPLLHGRKTAHIYKSLIDKVRSRLCAWKASSLSSTGRLT 368