BLASTX nr result

ID: Catharanthus23_contig00035779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035779
         (596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB61812.1| hypothetical protein L484_012245 [Morus notabilis]      81   2e-13
ref|YP_588424.1| hypothetical protein ZeamMp180 [Zea mays subsp....    63   5e-08
ref|YP_008992271.1| hypothetical protein Salmi_Mp005 (mitochondr...    60   3e-07
dbj|BAG84633.1| hypothetical protein [Aegilops crassa]                 60   3e-07

>gb|EXB61812.1| hypothetical protein L484_012245 [Morus notabilis]
          Length = 80

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +2

Query: 473 SLSSVFLVLENGRHLSQDRNDYPCPMGLHPSLNIVGYC*LP 595
           SLSSVFLVLENGR+LSQD NDYPCPMGLHPSLN+VGYC LP
Sbjct: 32  SLSSVFLVLENGRNLSQDWNDYPCPMGLHPSLNVVGYCSLP 72


>ref|YP_588424.1| hypothetical protein ZeamMp180 [Zea mays subsp. mays]
           gi|40795108|gb|AAR91152.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|413954228|gb|AFW86877.1|
           putative uncharacterized protein orf110-c [Zea mays]
           gi|413954267|gb|AFW86916.1| putative uncharacterized
           protein orf110-c [Zea mays]
          Length = 110

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 596 GEVNSTRRYSGMDVDPSGRDNHSGPGRGGDHS 501
           GEV STRR+SGM+VDPSGRDNHSGPGRGGD S
Sbjct: 77  GEVKSTRRHSGMNVDPSGRDNHSGPGRGGDTS 108


>ref|YP_008992271.1| hypothetical protein Salmi_Mp005 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292250|gb|AGU16542.1| hypothetical
           protein Salmi_Mp005 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 117

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 596 GEVNSTRRYSGMDVDPSGRDNHSGPGRGGDHSQEPK 489
           GEVNSTRR+SGMDVDPSGRDNHSGPGR    S+  K
Sbjct: 75  GEVNSTRRHSGMDVDPSGRDNHSGPGRWRPFSRTKK 110


>dbj|BAG84633.1| hypothetical protein [Aegilops crassa]
          Length = 113

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -1

Query: 596 GEVNSTRRYSGMDVDPSGRDNHSGPGRGGDHS 501
           GEV STRR+SGM+VDPSG DNHSGPGRGGD S
Sbjct: 80  GEVKSTRRHSGMNVDPSGGDNHSGPGRGGDTS 111


Top