BLASTX nr result
ID: Catharanthus23_contig00035601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00035601
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 62 1e-07
ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 62 1e-07
ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 61 2e-07
ref|XP_006480137.1| PREDICTED: armadillo repeat-containing prote... 58 2e-06
ref|XP_006423067.1| hypothetical protein CICLE_v10029827mg, part... 58 2e-06
gb|EOX98193.1| RING/U-box superfamily protein, putative [Theobro... 57 2e-06
ref|NP_567943.1| RING/U-box domain-containing protein [Arabidops... 55 7e-06
dbj|BAC43725.1| unknown protein [Arabidopsis thaliana] 55 7e-06
gb|AAM62531.1| unknown [Arabidopsis thaliana] 55 7e-06
>ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 2
[Solanum lycopersicum]
Length = 208
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLY---GGGXXXXXXXXXXXXXXXXXXXYRA 181
I+KLVPE SL +QQE++V+ELLK+++ YN +Y G
Sbjct: 68 ISKLVPEASLLVQQEKDVVELLKKIRRYNHIYISGAYGIFLKVLALPLLTRRVLRALMDT 127
Query: 182 VRNPDNIT---FTVRSFAILLTVLYDGCGFNFITTGGL 286
+ +PD + + +R FA+ L+ +Y GC F FI TGGL
Sbjct: 128 LMDPDQVRLNYYLMRIFALFLSWIYWGCEFQFIPTGGL 165
>ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 1
[Solanum lycopersicum]
Length = 227
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLY---GGGXXXXXXXXXXXXXXXXXXXYRA 181
I+KLVPE SL +QQE++V+ELLK+++ YN +Y G
Sbjct: 87 ISKLVPEASLLVQQEKDVVELLKKIRRYNHIYISGAYGIFLKVLALPLLTRRVLRALMDT 146
Query: 182 VRNPDNIT---FTVRSFAILLTVLYDGCGFNFITTGGL 286
+ +PD + + +R FA+ L+ +Y GC F FI TGGL
Sbjct: 147 LMDPDQVRLNYYLMRIFALFLSWIYWGCEFQFIPTGGL 184
>ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum
tuberosum]
Length = 226
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Frame = +2
Query: 2 CSPINKLVPEPSLFLQQEEEVMELLKRVKHYNCLY---GGGXXXXXXXXXXXXXXXXXXX 172
C I+KLVPE SL QQEE+V+ELLK+++ YN LY G
Sbjct: 83 CCLISKLVPEASLLAQQEEDVVELLKKIRRYNHLYISGAYGIFLKVLALPLLTRRVLRAL 142
Query: 173 YRAVRNPDNIT---FTVRSFAILLTVLYDGCGFNFITTGGL 286
+ +PD + + +R A+ L+ +Y C F FI TGGL
Sbjct: 143 MDTLMDPDQVRLNYYLMRILALFLSWIYCSCEFQFIPTGGL 183
>ref|XP_006480137.1| PREDICTED: armadillo repeat-containing protein 6-like [Citrus
sinensis]
Length = 669
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLYGGGXXXXXXXXXXXXXXXXXXXYRAVRN 190
IN+L PE SL LQQE+EV E+LK+V YN L+ GG + A+ +
Sbjct: 79 INRLTPESSLSLQQEQEVAEVLKKVVRYNLLFVGG-ARGLVQKVYELPFFMTRIFVAMMD 137
Query: 191 P---DNITFTVRSFAILLTVLYDGCGFNFITTGGL 286
P D+ +R FA+ L+VLY F+FI TG L
Sbjct: 138 PDTEDSYLQEMRIFAMALSVLYAATPFDFIPTGSL 172
>ref|XP_006423067.1| hypothetical protein CICLE_v10029827mg, partial [Citrus clementina]
gi|557525001|gb|ESR36307.1| hypothetical protein
CICLE_v10029827mg, partial [Citrus clementina]
Length = 314
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLYGGGXXXXXXXXXXXXXXXXXXXYRAVRN 190
IN+L PE SL LQQE+EV E+LK+V YN L+ GG + A+ +
Sbjct: 181 INRLTPESSLSLQQEQEVAEVLKKVVRYNLLFVGG-ARGLVQKVYELPFFMKRIFVAMMD 239
Query: 191 P---DNITFTVRSFAILLTVLYDGCGFNFITTGGL 286
P D+ +R FA+ L+VLY F+FI TG L
Sbjct: 240 PDTEDSYLQEMRIFAMALSVLYAATPFDFIPTGSL 274
>gb|EOX98193.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 231
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +2
Query: 2 CSPINKLVPEPSLFLQQEEEVMELLKRVKHYNCLYGGGXXXXXXXXXXXXXXXXXXXYRA 181
C +N L+PE SL QQ++EVME+LK V+ YN L+ GG ++A
Sbjct: 73 CKIVN-LMPEVSLQQQQDQEVMEVLKSVQRYNLLFVGG-ARGLAQKVRELPFFIKRMFQA 130
Query: 182 VRNP---DNITFTVRSFAILLTVLYDGCGFNFITTGGL 286
+ +P D+ +R FA++L++LY F+FI TGGL
Sbjct: 131 LMDPDTNDSYLAEMRLFAMVLSILYRATPFDFIPTGGL 168
>ref|NP_567943.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|63003762|gb|AAY25410.1| At4g33940 [Arabidopsis
thaliana] gi|87116618|gb|ABD19673.1| At4g33940
[Arabidopsis thaliana] gi|332660897|gb|AEE86297.1|
RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 262
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLYGGGXXXXXXXXXXXXXXXXXXXYRAV-R 187
I KL PEPSL +QE+EV E+L +V+ YN L+ GG + +
Sbjct: 120 ITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDT 179
Query: 188 NPDNITF-TVRSFAILLTVLYDGCGFNFITTGG 283
+ +N+ F VR FA+ ++ LY FNFI TGG
Sbjct: 180 DVNNLYFHEVRIFAMFMSTLYTAAEFNFIPTGG 212
>dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]
Length = 252
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLYGGGXXXXXXXXXXXXXXXXXXXYRAV-R 187
I KL PEPSL +QE+EV E+L +V+ YN L+ GG + +
Sbjct: 110 ITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDT 169
Query: 188 NPDNITF-TVRSFAILLTVLYDGCGFNFITTGG 283
+ +N+ F VR FA+ ++ LY FNFI TGG
Sbjct: 170 DVNNLYFHEVRIFAMFMSTLYTAAEFNFIPTGG 202
>gb|AAM62531.1| unknown [Arabidopsis thaliana]
Length = 262
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 INKLVPEPSLFLQQEEEVMELLKRVKHYNCLYGGGXXXXXXXXXXXXXXXXXXXYRAV-R 187
I KL PEPSL +QE+EV E+L +V+ YN L+ GG + +
Sbjct: 120 ITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDT 179
Query: 188 NPDNITF-TVRSFAILLTVLYDGCGFNFITTGG 283
+ +N+ F VR FA+ ++ LY FNFI TGG
Sbjct: 180 DVNNLYFHEVRIFAMFMSTLYTAAEFNFIPTGG 212