BLASTX nr result
ID: Catharanthus23_contig00035579
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00035579
(317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006397965.1| hypothetical protein EUTSA_v10001290mg [Eutr... 74 2e-11
ref|XP_006355803.1| PREDICTED: zinc finger CCCH domain-containin... 70 2e-10
ref|XP_006293613.1| hypothetical protein CARUB_v10022564mg [Caps... 70 2e-10
ref|XP_002882127.1| zinc finger helicase family protein [Arabido... 70 2e-10
ref|XP_004240542.1| PREDICTED: zinc finger CCCH domain-containin... 70 3e-10
ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [... 70 3e-10
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin... 69 5e-10
emb|CBI36846.3| unnamed protein product [Vitis vinifera] 69 5e-10
ref|XP_006372890.1| hypothetical protein POPTR_0017s06030g [Popu... 68 1e-09
gb|EOX95075.1| ATP-dependent RNA helicase, putative [Theobroma c... 68 1e-09
gb|EXC10294.1| Zinc finger CCCH domain-containing protein 31 [Mo... 68 1e-09
gb|EMJ01523.1| hypothetical protein PRUPE_ppa000721mg [Prunus pe... 64 2e-08
ref|XP_006479956.1| PREDICTED: zinc finger CCCH domain-containin... 62 6e-08
ref|XP_006479955.1| PREDICTED: zinc finger CCCH domain-containin... 62 6e-08
ref|XP_006444349.1| hypothetical protein CICLE_v10018660mg [Citr... 62 6e-08
gb|EPS68050.1| hypothetical protein M569_06723, partial [Genlise... 62 6e-08
ref|XP_004290791.1| PREDICTED: zinc finger CCCH domain-containin... 62 6e-08
ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containin... 62 8e-08
ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [... 62 8e-08
ref|XP_004495965.1| PREDICTED: zinc finger CCCH domain-containin... 62 1e-07
>ref|XP_006397965.1| hypothetical protein EUTSA_v10001290mg [Eutrema salsugineum]
gi|557099038|gb|ESQ39418.1| hypothetical protein
EUTSA_v10001290mg [Eutrema salsugineum]
Length = 1009
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +2
Query: 185 SEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S PSSNF LP+ A++S+IIEKI ENRVTLIVGEPGCGKSSQVP
Sbjct: 18 SPPSSNFASLPVVAMKSRIIEKILENRVTLIVGEPGCGKSSQVP 61
>ref|XP_006355803.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
[Solanum tuberosum]
Length = 1022
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
+S S F VLP+AAL+SKII+KIQENRVTLI+GE GCGKSSQVP
Sbjct: 21 TSSSSLEFPVLPVAALKSKIIQKIQENRVTLIIGETGCGKSSQVP 65
>ref|XP_006293613.1| hypothetical protein CARUB_v10022564mg [Capsella rubella]
gi|482562321|gb|EOA26511.1| hypothetical protein
CARUB_v10022564mg [Capsella rubella]
Length = 1010
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +2
Query: 191 PSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
PSSNF LPI A++ +IIEKI ENRVTLIVG+PGCGKSSQVP
Sbjct: 14 PSSNFASLPIMAMKKRIIEKILENRVTLIVGDPGCGKSSQVP 55
>ref|XP_002882127.1| zinc finger helicase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297327966|gb|EFH58386.1| zinc finger helicase
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1015
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 4/52 (7%)
Frame = +2
Query: 173 TELSSE----PSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
T SSE PSSNF LPI A++ +II+KI ENRVTLIVGEPGCGKSSQVP
Sbjct: 9 TSSSSESLPLPSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVP 60
>ref|XP_004240542.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
[Solanum lycopersicum]
Length = 1022
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
+S S F VLP+AAL+SKII+KIQENRVTLI+GE GCGKSSQVP
Sbjct: 21 TSASSLEFPVLPVAALKSKIIQKIQENRVTLIIGETGCGKSSQVP 65
>ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis
thaliana] gi|75317978|sp|O22243.2|C3H31_ARATH RecName:
Full=Zinc finger CCCH domain-containing protein 31;
Short=AtC3H31 gi|3738282|gb|AAC63624.1| putative
ATP-dependent RNA helicase A [Arabidopsis thaliana]
gi|225898609|dbj|BAH30435.1| hypothetical protein
[Arabidopsis thaliana] gi|330255781|gb|AEC10875.1| zinc
finger CCCH domain-containing protein 31 [Arabidopsis
thaliana]
Length = 1015
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +2
Query: 191 PSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
PSSNF LPI A++ +II+KI ENRVTLIVGEPGCGKSSQVP
Sbjct: 19 PSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVP 60
>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
vinifera]
Length = 1014
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
SS+ S++F LP+ ALR KI+EKI ENRVTLIVGE GCGKSSQVP
Sbjct: 10 SSDYSADFSTLPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVP 54
>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
Length = 1007
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
SS+ S++F LP+ ALR KI+EKI ENRVTLIVGE GCGKSSQVP
Sbjct: 10 SSDYSADFSTLPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVP 54
>ref|XP_006372890.1| hypothetical protein POPTR_0017s06030g [Populus trichocarpa]
gi|550319538|gb|ERP50687.1| hypothetical protein
POPTR_0017s06030g [Populus trichocarpa]
Length = 1056
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 PSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
P SNF LP+ AL+ KI+EKI ENRVTLIVGE GCGKSSQVP
Sbjct: 20 PQSNFASLPVMALKDKIVEKILENRVTLIVGETGCGKSSQVP 61
>gb|EOX95075.1| ATP-dependent RNA helicase, putative [Theobroma cacao]
Length = 1022
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
SS PSS F LP+ AL+ +I+EKI ENRVTLIVGE GCGKSSQVP
Sbjct: 17 SSFPSSKFSSLPVMALKERIVEKILENRVTLIVGETGCGKSSQVP 61
>gb|EXC10294.1| Zinc finger CCCH domain-containing protein 31 [Morus notabilis]
Length = 1002
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S PS F LP+ A R KIIEK+ ENRVTLIVGEPGCGKSSQVP
Sbjct: 18 SFAPSFRFSSLPVMAFREKIIEKVFENRVTLIVGEPGCGKSSQVP 62
>gb|EMJ01523.1| hypothetical protein PRUPE_ppa000721mg [Prunus persica]
Length = 1022
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
SS ++ F LP+ ALR KI+EKI +NRVTLIVGE GCGKSSQVP
Sbjct: 17 SSFSNAKFSYLPVMALREKIVEKILDNRVTLIVGETGCGKSSQVP 61
>ref|XP_006479956.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
isoform X2 [Citrus sinensis]
Length = 1017
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +2
Query: 194 SSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S F LP+ +LR KI+EK+ ENRVTLIVGE GCGKSSQVP
Sbjct: 20 SPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP 60
>ref|XP_006479955.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
isoform X1 [Citrus sinensis]
Length = 1020
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +2
Query: 194 SSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S F LP+ +LR KI+EK+ ENRVTLIVGE GCGKSSQVP
Sbjct: 20 SPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP 60
>ref|XP_006444349.1| hypothetical protein CICLE_v10018660mg [Citrus clementina]
gi|557546611|gb|ESR57589.1| hypothetical protein
CICLE_v10018660mg [Citrus clementina]
Length = 1020
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +2
Query: 194 SSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S F LP+ +LR KI+EK+ ENRVTLIVGE GCGKSSQVP
Sbjct: 20 SPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP 60
>gb|EPS68050.1| hypothetical protein M569_06723, partial [Genlisea aurea]
Length = 199
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +2
Query: 203 FGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
F LP+ A+R KI+EKI ENRVTLIVGE GCGKSSQVP
Sbjct: 1 FSGLPVMAMRGKIVEKIMENRVTLIVGETGCGKSSQVP 38
>ref|XP_004290791.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
[Fragaria vesca subsp. vesca]
Length = 1027
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2
Query: 182 SSEPSSNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S+ S F LP+ ALR KI+EKI +NRVTLIVGE GCGKSSQ+P
Sbjct: 17 STFASYKFSDLPVTALREKIVEKILDNRVTLIVGETGCGKSSQIP 61
>ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like,
partial [Cucumis sativus]
Length = 432
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +2
Query: 182 SSEPSSN-FGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
SS PS F LP+ +LR +I+EKI++NRVTLIVGE GCGKSSQ+P
Sbjct: 12 SSSPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIP 57
>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355480579|gb|AES61782.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 1035
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +2
Query: 197 SNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S F LP+ ++R KII+KIQ+NRVTLI+GE GCGKSSQ+P
Sbjct: 25 STFSHLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIP 64
>ref|XP_004495965.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
isoform X1 [Cicer arietinum]
Length = 1019
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +2
Query: 197 SNFGVLPIAALRSKIIEKIQENRVTLIVGEPGCGKSSQVP 316
S F LP+ ++R KI++KIQ+NRVTLI+GE GCGKSSQ+P
Sbjct: 22 STFSHLPVMSMRKKIVDKIQQNRVTLIIGETGCGKSSQIP 61