BLASTX nr result

ID: Catharanthus23_contig00035352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035352
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
gb|EMJ09302.1| hypothetical protein PRUPE_ppa001024mg [Prunus pe...    59   5e-07
gb|EOY07672.1| Pentatricopeptide repeat (PPR) superfamily protei...    59   9e-07
ref|XP_004305232.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|ESW16494.1| hypothetical protein PHAVU_007G161300g [Phaseolus...    56   4e-06
gb|ESW16493.1| hypothetical protein PHAVU_007G161300g [Phaseolus...    56   4e-06

>ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Glycine max]
          Length = 667

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEEN 324
           IET  GL  F A DVSN R++EIY++LEGL+ LM++EGC++ EE D EN
Sbjct: 616 IETSGGLLSFIAKDVSNGRSDEIYALLEGLLGLMREEGCVLQEELDYEN 664


>gb|EMJ09302.1| hypothetical protein PRUPE_ppa001024mg [Prunus persica]
          Length = 931

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEENS 321
           IET  GLQ F A DVSN R EEIY +LEGL+ LMK++G ++ +E DEE +
Sbjct: 616 IETSDGLQSFIAKDVSNGRTEEIYEILEGLLGLMKEKGYVLQDELDEETT 665


>gb|EOY07672.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 667

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEEN 324
           IET  GLQ F A D S++R EEIY +LEGL+ LMK+EG  + +E+DEEN
Sbjct: 616 IETSGGLQSFIAKDRSSERTEEIYVLLEGLLGLMKEEGYTLHDEYDEEN 664


>ref|XP_004305232.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Fragaria vesca subsp. vesca]
          Length = 664

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEEN 324
           IET  GL  F A D SN+R E IY +LEGL+ LMK++G +++EE DEE+
Sbjct: 612 IETSDGLHSFIARDASNERTEAIYEILEGLLGLMKEKGYVLLEELDEES 660


>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEE 327
           IET  GL+ F A DVS++R+EEIY MLEGL+ LM++EG  + +E DEE
Sbjct: 616 IETSGGLRSFIARDVSSERSEEIYGMLEGLLGLMREEGYTLQDELDEE 663


>gb|ESW16494.1| hypothetical protein PHAVU_007G161300g [Phaseolus vulgaris]
          Length = 663

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEEN 324
           IET  GL  F A DVSN R++EIY++LEGL+ L+++EG ++ EE D EN
Sbjct: 614 IETSGGLLSFIAKDVSNGRSDEIYALLEGLLGLLREEGYVLQEELDYEN 662


>gb|ESW16493.1| hypothetical protein PHAVU_007G161300g [Phaseolus vulgaris]
          Length = 466

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = -3

Query: 470 IETCRGLQCFTAGDVSNDRAEEIYSMLEGLIQLMKKEGCIVIEEFDEEN 324
           IET  GL  F A DVSN R++EIY++LEGL+ L+++EG ++ EE D EN
Sbjct: 417 IETSGGLLSFIAKDVSNGRSDEIYALLEGLLGLLREEGYVLQEELDYEN 465


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