BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035326
         (657 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361254.1| PREDICTED: pentatricopeptide repeat-containi...   318   7e-85
ref|XP_004244671.1| PREDICTED: pentatricopeptide repeat-containi...   315   1e-83
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi...   268   8e-70
ref|XP_002517091.1| pentatricopeptide repeat-containing protein,...   266   3e-69
gb|EXC34666.1| hypothetical protein L484_020434 [Morus notabilis]     265   1e-68
gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus...   250   2e-64
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t...   249   4e-64
ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containi...   240   2e-61
ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   216   4e-54
ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group] g...   213   3e-53
gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japo...   213   3e-53
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...   212   9e-53
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   211   1e-52
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-52
ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [S...   211   2e-52
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...   210   3e-52
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]     210   3e-52
ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [S...   210   3e-52
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...   210   3e-52
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...   209   5e-52

>ref|XP_006361254.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum tuberosum]
          Length = 597

 Score =  318 bits (816), Expect = 7e-85
 Identities = 151/217 (69%), Positives = 186/217 (85%)
 Frame = +1

Query: 4   VRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           VRDVV+WTS+IDG+V+ NM DEAL  F+ MCSSG+E N VT+IT+FSACSLKGDLSLG+S
Sbjct: 137 VRDVVTWTSLIDGYVKMNMVDEALRLFDLMCSSGVEFNNVTLITVFSACSLKGDLSLGKS 196

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +HELVE  GV+CSLNLMN+++DMYVKCG L  A EIF++M+++DVFSWTSMI+GYA++G+
Sbjct: 197 VHELVENRGVECSLNLMNAILDMYVKCGCLPMAKEIFDKMEIKDVFSWTSMIHGYARSGE 256

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           VD AKK F+ MPERNVVSW A+I+CY+QNNRP EALE FH+ME +G  P ESTLVSVLSA
Sbjct: 257 VDSAKKCFSVMPERNVVSWNAMIACYSQNNRPWEALELFHEMEKQGLVPMESTLVSVLSA 316

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           CSQ   LD G+RIHD+Y+K+K +  S+IL NALIDMY
Sbjct: 317 CSQSGSLDFGRRIHDYYIKQKRIKFSVILANALIDMY 353



 Score =  120 bits (302), Expect = 3e-25
 Identities = 65/173 (37%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW +MI  + Q N   EALE F +M   GL P E T++++ SACS  G L  GR I
Sbjct: 270 RNVVSWNAMIACYSQNNRPWEALELFHEMEKQGLVPMESTLVSVLSACSQSGSLDFGRRI 329

Query: 187 HEL-VERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H+  +++  +K S+ L N++IDMY KCG+++ A E+F++M  RD+ SW S+I G A +G 
Sbjct: 330 HDYYIKQKRIKFSVILANALIDMYGKCGNMDAAGELFHEMQERDLVSWNSVIVGCASHGL 389

Query: 364 VDLAKKFFNEMP----ERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPP 510
            + A   F +M     + + +++  ++S  A      +  E F  ME++G  P
Sbjct: 390 AEKAVTLFEQMKCSGLKPDSITFVGVLSACAHGGLINQGWEYFRSMELKGLIP 442



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 61/215 (28%), Positives = 101/215 (46%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIH 189
           +V  W +MI GFV+    + +   F +M    +E ++ + + +   C +           
Sbjct: 42  NVYIWNTMIRGFVKNQFLEMSFCLFRRMVREKVEMDKRSYVFVLKGCGV----------- 90

Query: 190 ELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVD 369
             +E  GV C +  +  + D+ V+ G                      +++ Y  +GK+ 
Sbjct: 91  --LEGMGVHCRIWKVGFLSDLIVRNG----------------------LVHFYGGSGKIV 126

Query: 370 LAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACS 549
            A+K F+E P R+VV+WT+LI  Y + N   EAL  F  M   G      TL++V SACS
Sbjct: 127 DAQKVFDESPVRDVVTWTSLIDGYVKMNMVDEALRLFDLMCSSGVEFNNVTLITVFSACS 186

Query: 550 QLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
               L +G+ +H+  V+ + V  SL L NA++DMY
Sbjct: 187 LKGDLSLGKSVHEL-VENRGVECSLNLMNAILDMY 220



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           RD+VSW S+I G     +A++A+  FE+M  SGL+P+ +T + + SAC+  G ++ G   
Sbjct: 372 RDLVSWNSVIVGCASHGLAEKAVTLFEQMKCSGLKPDSITFVGVLSACAHGGLINQGWEY 431

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVR-DVFSWTSMINGYAKNGK 363
              +E  G+   +     M D+  + G L++A+E   QM V  D   W +++NG   +G 
Sbjct: 432 FRSMELKGLIPGVEHYACMADLLGRSGHLKEAFEFTKQMPVEPDKAVWGALLNGCRMHGD 491

Query: 364 VDLAK 378
           V+LAK
Sbjct: 492 VELAK 496


>ref|XP_004244671.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum lycopersicum]
          Length = 529

 Score =  315 bits (806), Expect = 1e-83
 Identities = 148/217 (68%), Positives = 185/217 (85%)
 Frame = +1

Query: 4   VRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           VRDVV+WTS+IDG+V+  M DEAL  F+ MCSSG+E N+VT+IT+FSACSLKGD++LG+ 
Sbjct: 69  VRDVVTWTSLIDGYVKMKMVDEALRLFDLMCSSGVEFNDVTLITVFSACSLKGDMNLGKL 128

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +HELVE  GV+CSLNLMN+++DMYVKCG L  A E+F++M+++DVFSWTSMI+GYA+NG+
Sbjct: 129 VHELVENRGVECSLNLMNAILDMYVKCGCLPMAKEMFDKMEIKDVFSWTSMIHGYARNGE 188

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           VDLAKK F+ MPERNVVSW A+I+CY+QNNRP EALE FH+ME  G  P ESTLVSVLSA
Sbjct: 189 VDLAKKCFSVMPERNVVSWNAMIACYSQNNRPWEALELFHEMEKRGLVPMESTLVSVLSA 248

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           C+Q   LD G+RIHD+Y+K+K V  S+IL NALIDMY
Sbjct: 249 CAQSGSLDFGRRIHDYYIKQKQVKFSVILANALIDMY 285



 Score =  113 bits (283), Expect = 4e-23
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW +MI  + Q N   EALE F +M   GL P E T++++ SAC+  G L  GR I
Sbjct: 202 RNVVSWNAMIACYSQNNRPWEALELFHEMEKRGLVPMESTLVSVLSACAQSGSLDFGRRI 261

Query: 187 HEL-VERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H+  +++  VK S+ L N++IDMY KCG++                              
Sbjct: 262 HDYYIKQKQVKFSVILANALIDMYGKCGNM------------------------------ 291

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
            D A + F+EMPER++VSW ++I   A +   ++A+  F QM+  G  P   T V VLSA
Sbjct: 292 -DAAGELFHEMPERDLVSWNSVIVGCASHGLAQKAVTLFEQMKCSGLKPDSITFVGVLSA 350

Query: 544 CS 549
           C+
Sbjct: 351 CA 352



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           RD+VSW S+I G     +A +A+  FE+M  SGL+P+ +T + + SAC+  G ++ G   
Sbjct: 304 RDLVSWNSVIVGCASHGLAQKAVTLFEQMKCSGLKPDSITFVGVLSACAHGGLVNQGWEY 363

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVR-DVFSWTSMINGYAKNGK 363
              +E NG+   +     M D+  + G L++A+E   QM V  D   W +++NG   +G 
Sbjct: 364 FRCMELNGLIPGVEHYACMADLLGRSGHLKEAFEFTKQMPVEPDKAVWGALLNGCRMHGN 423

Query: 364 VDLAK 378
           V+LAK
Sbjct: 424 VELAK 428



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/114 (36%), Positives = 67/114 (58%)
 Frame = +1

Query: 313 DVFSWTSMINGYAKNGKVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQME 492
           D+     +++ Y  +GK+  A+K F+E P R+VV+WT+LI  Y +     EAL  F  M 
Sbjct: 40  DLIVRNGLVHFYGGSGKIVDAQKVFDESPVRDVVTWTSLIDGYVKMKMVDEALRLFDLMC 99

Query: 493 IEGFPPTESTLVSVLSACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
             G    + TL++V SACS    +++G+ +H+  V+ + V  SL L NA++DMY
Sbjct: 100 SSGVEFNDVTLITVFSACSLKGDMNLGKLVHEL-VENRGVECSLNLMNAILDMY 152


>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score =  268 bits (686), Expect = 8e-70
 Identities = 129/220 (58%), Positives = 168/220 (76%), Gaps = 1/220 (0%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           SV+DVV+WT+MI+G+ + N  DEA+  F  M SS ++PNEVTMI L SACS KGD  +G+
Sbjct: 214 SVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGK 273

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
           ++HE + R  + CSLNL+N+M+DMYVKCG L  A EIFN M+ RDVFSWTS++NGYAKNG
Sbjct: 274 TLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNG 333

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQM-EIEGFPPTESTLVSVL 537
            +  A+K F+EMPERN+VSW A+I+ Y+QN++P EALE FH M ++ G  PTE TLV VL
Sbjct: 334 DLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVL 393

Query: 538 SACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           SA  QL CL++GQ IH  +V K  + +SLIL NA++DMYA
Sbjct: 394 SASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYA 433



 Score =  113 bits (282), Expect = 6e-23
 Identities = 70/192 (36%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSS-GLEPNEVTMITLFSACSLKGDLSLGRS 183
           R++VSW +MI G+ Q +   EALE F  M    GL P E T++ + SA    G L +G+ 
Sbjct: 348 RNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQE 407

Query: 184 IH-ELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
           IH   V + G++ SL L N+++DMY KCG                               
Sbjct: 408 IHCNHVNKIGIQVSLILKNAVMDMYAKCGS------------------------------ 437

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLS 540
            +D A K F+ MPE+N+VSW ++IS YA     K+AL  F QM   G  P   T + VLS
Sbjct: 438 -IDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLS 496

Query: 541 ACSQLSCLDIGQ 576
           ACS    +  GQ
Sbjct: 497 ACSYGGFVSEGQ 508



 Score =  105 bits (262), Expect = 1e-20
 Identities = 61/211 (28%), Positives = 105/211 (49%)
 Frame = +1

Query: 22  WTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVE 201
           W +MI G+ + N       FF +M  +  E +  + +    AC    +  +G ++H ++ 
Sbjct: 120 WNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIW 179

Query: 202 RNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKK 381
           + G    L + N +I  YV+ G L  A ++F++  V+DV +WT+MINGYA+N  +D A  
Sbjct: 180 KRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIA 239

Query: 382 FFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSC 561
            FN M   +V                                P E T++++LSACSQ   
Sbjct: 240 LFNSMLSSDV-------------------------------KPNEVTMIALLSACSQKGD 268

Query: 562 LDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
            ++G+ +H+ ++++K +  SL L NA++DMY
Sbjct: 269 SEMGKTLHE-HIRRKDITCSLNLLNAMLDMY 298



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +++VSW SMI  +     A +AL  F++M  SGL+P+ +T I + SACS  G +S G++ 
Sbjct: 451 KNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAH 510

Query: 187 HELVER-NGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVR-DVFSWTSMINGYAKNG 360
            E +E   GV+        M+D+  + G L++AYE+ ++M +      W ++++   K+G
Sbjct: 511 FESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHG 570

Query: 361 KVDLAK 378
            V++AK
Sbjct: 571 NVEMAK 576


>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  266 bits (681), Expect = 3e-69
 Identities = 128/217 (58%), Positives = 169/217 (77%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           RDVVSWTSMIDG+   +   +AL+ F+ M  S +EPNEVTMI++ SACS KGDLSLG+SI
Sbjct: 322 RDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMISVLSACSQKGDLSLGKSI 381

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           HE V R  +  S+NLMN+++DMYVKCG L  A EIF+ M  +DVFSWTSM+NGYAK G++
Sbjct: 382 HEYVRRKNLNLSVNLMNAILDMYVKCGCLVAAREIFDSMGTKDVFSWTSMVNGYAKTGEL 441

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
           ++A+KFF++MP+RNVVSW A+I+ Y+QNN+PK+A+  FH M  EG  P E+TLV VLSAC
Sbjct: 442 EIARKFFDDMPKRNVVSWNAMIAGYSQNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSAC 501

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
            QL  LD+G+ IH +++++K    S+I+ NALIDMYA
Sbjct: 502 GQLGYLDLGRLIHMYHIERKQKGTSVIIANALIDMYA 538



 Score =  101 bits (252), Expect = 2e-19
 Identities = 63/176 (35%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW +MI G+ Q N   +A+  F  M   GL P E T++ + SAC   G L LGR I
Sbjct: 454 RNVVSWNAMIAGYSQNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLI 513

Query: 187 HEL-VERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H   +ER     S+ + N++IDMY KC                               G 
Sbjct: 514 HMYHIERKQKGTSVIIANALIDMYAKC-------------------------------GV 542

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVS 531
           +D A + FN MP R++VSW ++I+  A +   K+AL  F QM  EGF P + T  S
Sbjct: 543 IDAAARVFNGMPGRDLVSWNSMIAACASHGHAKQALLMFGQMIHEGFKPDDITFES 598



 Score =  100 bits (249), Expect = 4e-19
 Identities = 67/211 (31%), Positives = 103/211 (48%)
 Frame = +1

Query: 22  WTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVE 201
           W +MI GF    M    L FF +M    +E +  + +    A         G SIH  + 
Sbjct: 226 WNTMIRGFSNAKMPVMGLSFFWQMVRERVEMDTRSFVFALKASEQFLTALEGESIHCAIW 285

Query: 202 RNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKK 381
           + G  C+L + N +I  Y                               + +G + LA+K
Sbjct: 286 KIGFPCALLVQNGLIHFY-------------------------------SVHGCLVLARK 314

Query: 382 FFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSC 561
            F+E P R+VVSWT++I  Y+ ++   +AL+ F  M +    P E T++SVLSACSQ   
Sbjct: 315 VFDETPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMISVLSACSQKGD 374

Query: 562 LDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           L +G+ IH+ YV++K + LS+ L NA++DMY
Sbjct: 375 LSLGKSIHE-YVRRKNLNLSVNLMNAILDMY 404


>gb|EXC34666.1| hypothetical protein L484_020434 [Morus notabilis]
          Length = 603

 Score =  265 bits (676), Expect = 1e-68
 Identities = 124/219 (56%), Positives = 167/219 (76%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           SVRDVV+WT+MIDG+ +++++DEA++ FE M  S ++PNE+TMIT+ SAC  KGD+ +G+
Sbjct: 150 SVRDVVTWTTMIDGYAKQDLSDEAIQVFESMLLSDVQPNEITMITMLSACGSKGDVRMGK 209

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            I++ V    V CSLNL N+ +DM+ KCG L +A EIF+ M  RDVFSWTSM+NGYAK G
Sbjct: 210 RIYDYVIMENVHCSLNLSNAALDMFAKCGCLIEAREIFDCMKTRDVFSWTSMVNGYAKCG 269

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLS 540
           ++D+A++FF+ MPE+N VSW A+I+ Y+QNN+PKEAL+ FH M   G  PTE TLV  LS
Sbjct: 270 ELDVAREFFDSMPEKNAVSWNAMIAGYSQNNQPKEALKLFHDMMKAGLAPTEHTLVCALS 329

Query: 541 ACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           AC QL CLD+GQ IH +++  K    S+IL NAL+DMYA
Sbjct: 330 ACGQLGCLDLGQWIHHYHINPKGPRPSVILNNALMDMYA 368



 Score =  106 bits (265), Expect = 5e-21
 Identities = 68/199 (34%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           ++ VSW +MI G+ Q N   EAL+ F  M  +GL P E T++   SAC   G L LG+ I
Sbjct: 284 KNAVSWNAMIAGYSQNNQPKEALKLFHDMMKAGLAPTEHTLVCALSACGQLGCLDLGQWI 343

Query: 187 HEL-VERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H   +   G + S+ L N+++DMY KCG                                
Sbjct: 344 HHYHINPKGPRPSVILNNALMDMYAKCGC------------------------------- 372

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           +D A   FNEM E N+VSW  +I+ YA +   K+AL  F QM+ +   P   T V+VLSA
Sbjct: 373 IDTAAGVFNEMSEGNLVSWNTMIAGYAAHGYAKQALNLFDQMKHKELEPDCITFVAVLSA 432

Query: 544 CSQLSCLDIGQRIHDFYVK 600
           C     +  G+      VK
Sbjct: 433 CGHGGLVSEGKEHFKSMVK 451



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 57/212 (26%), Positives = 98/212 (46%)
 Frame = +1

Query: 22  WTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVE 201
           W +MI G+ +  +      FF +M    +E + ++ +    AC     +S G S+  L+ 
Sbjct: 56  WNTMIRGYAKAQVPLMGFSFFRRMVLQHVEMDGLSFVYALKACEKLPRISEGNSVCCLIW 115

Query: 202 RNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKK 381
           + G    L + N +I  Y                               A+ G +  A+K
Sbjct: 116 KMGFDADLLVRNGLIRFY-------------------------------AERGCLFYARK 144

Query: 382 FFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSC 561
            F+E   R+VV+WT +I  YA+ +   EA++ F  M +    P E T++++LSAC     
Sbjct: 145 MFDECSVRDVVTWTTMIDGYAKQDLSDEAIQVFESMLLSDVQPNEITMITMLSACGSKGD 204

Query: 562 LDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           + +G+RI+D+ + +  V  SL L NA +DM+A
Sbjct: 205 VRMGKRIYDYVIMEN-VHCSLNLSNAALDMFA 235



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRS-I 186
           ++VSW +MI G+     A +AL  F++M    LEP+ +T + + SAC   G +S G+   
Sbjct: 387 NLVSWNTMIAGYAAHGYAKQALNLFDQMKHKELEPDCITFVAVLSACGHGGLVSEGKEHF 446

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMD-VRDVFSWTSMINGYAKNGK 363
             +V+  G++        M+D+  + G LE+AY++   M  V    +W +++N    +G 
Sbjct: 447 KSMVKDYGMEPKGEHYACMVDLLGRTGRLEEAYDLIGNMPMVPSESAWGALLNASRMHGN 506

Query: 364 VDLAK 378
           V+LAK
Sbjct: 507 VELAK 511


>gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus vulgaris]
          Length = 670

 Score =  250 bits (639), Expect = 2e-64
 Identities = 116/219 (52%), Positives = 166/219 (75%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           SV+DVV+WT+MIDG+   N +D A E F  M    +EPNEVT+I + SACS KGDL +G+
Sbjct: 209 SVKDVVTWTTMIDGYAACNCSDVATELFGLMLEGDVEPNEVTLIAVLSACSHKGDLGMGK 268

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            IHE++E+  V+  L+L N+++DMYVKCG L  A ++F++M+ RDVFSWT+M+NGYAK G
Sbjct: 269 RIHEIMEKKNVRWGLSLHNALLDMYVKCGCLVAARKVFDRMESRDVFSWTTMVNGYAKCG 328

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLS 540
            ++ A++FF + P++NVV W+A+I+ Y+QN++PK++L+ FH+M  EGF P E TLVSVLS
Sbjct: 329 DLESARRFFEQTPQKNVVCWSAMIAGYSQNDKPKDSLKLFHEMLEEGFVPVEHTLVSVLS 388

Query: 541 ACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           AC +LSC  +G  IH ++V +  + LS+ L NA+IDMYA
Sbjct: 389 ACGKLSCFSLGHWIHRYFVDRIRISLSVTLTNAIIDMYA 427



 Score =  117 bits (292), Expect = 4e-24
 Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           ++VV W++MI G+ Q +   ++L+ F +M   G  P E T++++ SAC      SLG  I
Sbjct: 343 KNVVCWSAMIAGYSQNDKPKDSLKLFHEMLEEGFVPVEHTLVSVLSACGKLSCFSLGHWI 402

Query: 187 HE-LVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H   V+R  +  S+ L N++IDMY KC                               G 
Sbjct: 403 HRYFVDRIRISLSVTLTNAIIDMYAKC-------------------------------GS 431

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           +D A + F+ M ERN+VSW ++I+ YA N R K+A+E F +M   GF P + T VS+L+A
Sbjct: 432 IDAAAEVFSAMSERNLVSWNSMIAGYAANGRAKQAVEVFDKMRCMGFEPDDITFVSLLTA 491

Query: 544 CSQLSCLDIGQRIHDFYVKK 603
           CS    +  G+   D   +K
Sbjct: 492 CSHGGLVSQGKEYFDTMERK 511



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 62/211 (29%), Positives = 91/211 (43%)
 Frame = +1

Query: 22  WTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVE 201
           W ++I G+ +  +   A  FF  M    +  +  T +    AC        G S+H L  
Sbjct: 115 WNTIIRGYNKARIPVMAFSFFLDMFRRRVPFDPRTFVFSLKACEHFSMAPQGESVHSLAR 174

Query: 202 RNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKK 381
           + G    L + N ++  Y                               A  G ++ A+ 
Sbjct: 175 KTGFDSELLVRNGLVHFY-------------------------------AVRGWLNHARG 203

Query: 382 FFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSC 561
            F+EM  ++VV+WT +I  YA  N    A E F  M      P E TL++VLSACS    
Sbjct: 204 VFDEMSVKDVVTWTTMIDGYAACNCSDVATELFGLMLEGDVEPNEVTLIAVLSACSHKGD 263

Query: 562 LDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           L +G+RIH+  ++KK V   L L NAL+DMY
Sbjct: 264 LGMGKRIHEI-MEKKNVRWGLSLHNALLDMY 293



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           S R++VSW SMI G+     A +A+E F+KM   G EP+++T ++L +ACS  G +S G+
Sbjct: 443 SERNLVSWNSMIAGYAANGRAKQAVEVFDKMRCMGFEPDDITFVSLLTACSHGGLVSQGK 502

Query: 181 SIHELVERN-GVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDV-FSWTSMINGYAK 354
              + +ER  G+K        MID+  + G +E+AY++   M ++    SW ++++   K
Sbjct: 503 EYFDTMERKYGIKPKKEHYACMIDLLGRTGLVEEAYKLIKNMPMQPCEASWGALLSACRK 562

Query: 355 NGKVDLA 375
           +  V+LA
Sbjct: 563 HDNVELA 569


>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1024

 Score =  249 bits (637), Expect = 4e-64
 Identities = 115/219 (52%), Positives = 166/219 (75%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           S +DVV+WT+MIDG+   + ++EA+E FE M  S +EPNEVT+I + SACS  G+L +G+
Sbjct: 319 SDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGK 378

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            +HE VE   ++CSL+L N+++DMYVKC  L  A E+F++M  +DV+SWTSM+NGYAK G
Sbjct: 379 RVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCG 438

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLS 540
            ++ A++FF++ P +N V W+A+I+ Y+QNN+PKE+L+ FH+M   G  P E TLVSVLS
Sbjct: 439 DLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLS 498

Query: 541 ACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           AC QL+CL++G  IH ++V  K +PLS+ L NA++DMYA
Sbjct: 499 ACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYA 537



 Score =  114 bits (285), Expect = 3e-23
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           ++ V W++MI G+ Q N   E+L+ F +M   G+ P E T++++ SAC     L+LG  I
Sbjct: 453 KNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWI 512

Query: 187 HE-LVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H+  V    +  S+ L N+++DMY KCG                                
Sbjct: 513 HQYFVVGKIIPLSVTLENAIVDMYAKCGS------------------------------- 541

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           +D A + F+ MPERN++SW  +I+ YA N R K+A+  F QM   GF P   T VS+L+A
Sbjct: 542 IDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTA 601

Query: 544 CSQLSCLDIGQRIHDFYVKK 603
           CS    +  G+   D   +K
Sbjct: 602 CSHGGLISEGREYFDNMERK 621



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 61/211 (28%), Positives = 102/211 (48%)
 Frame = +1

Query: 22  WTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVE 201
           W +MI G+        A  FF  M    +E +  + +    AC     +  G S++ +V 
Sbjct: 225 WNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVW 284

Query: 202 RNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKK 381
           + G  C L + N +I  Y                               A+ G +  A++
Sbjct: 285 KMGFDCELLVRNGLIHFY-------------------------------AERGLLKNARQ 313

Query: 382 FFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSC 561
            F+E  +++VV+WT +I  YA ++  +EA+E F  M +    P E TL++V+SACS +  
Sbjct: 314 VFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGN 373

Query: 562 LDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           L++G+R+H+  V++K +  SL L NAL+DMY
Sbjct: 374 LEMGKRVHE-KVEEKNMRCSLSLHNALLDMY 403



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 41/126 (32%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+++SW +MI G+     A +A+  F++M + G EPN +T ++L +ACS  G +S GR  
Sbjct: 555 RNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREY 614

Query: 187 HELVERN-GVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDV-FSWTSMINGYAKNG 360
            + +ER  G+K        M+D+  + G LE+AY++   M ++    +W +++N    +G
Sbjct: 615 FDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHG 674

Query: 361 KVDLAK 378
            V+LA+
Sbjct: 675 NVELAR 680


>ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cicer arietinum]
          Length = 666

 Score =  240 bits (613), Expect = 2e-61
 Identities = 111/219 (50%), Positives = 163/219 (74%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           S +DVV+WT+MIDG+  +  + EA+E F+ M    +EPNEVT+I + SACS  GDL +G+
Sbjct: 209 SDKDVVTWTTMIDGYAAQKCSHEAMEVFKLMLLGDVEPNEVTLIAVLSACSEMGDLEMGK 268

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            +HE V+   + CSL+L N+++ MYVKCG L  A E+F++++ RDV+SWT M+NGYAK G
Sbjct: 269 KVHEKVKEKCMGCSLSLHNALLVMYVKCGHLIAARELFDRVETRDVYSWTCMVNGYAKCG 328

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLS 540
            ++ A++FF++ P++NVVSW A+I+ Y+QNN+P+E+L+ FH+M   G  P E TLVSVLS
Sbjct: 329 DLESARRFFDQTPQKNVVSWNAMIAGYSQNNKPEESLKLFHEMVGGGLVPDEHTLVSVLS 388

Query: 541 ACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           AC QL+CL++G  IH ++V  K + LS+ L N ++DMYA
Sbjct: 389 ACGQLTCLNLGYWIHQYFVVGKRMSLSVTLANVMVDMYA 427



 Score =  122 bits (306), Expect = 9e-26
 Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           ++VVSW +MI G+ Q N  +E+L+ F +M   GL P+E T++++ SAC     L+LG  I
Sbjct: 343 KNVVSWNAMIAGYSQNNKPEESLKLFHEMVGGGLVPDEHTLVSVLSACGQLTCLNLGYWI 402

Query: 187 HE-LVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           H+  V    +  S+ L N M+DMY KC                               G 
Sbjct: 403 HQYFVVGKRMSLSVTLANVMVDMYAKC-------------------------------GS 431

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           +D A + F+ MPERN++SW ++I+ YA N R K+A+  F QM   GF P   T VS+L+A
Sbjct: 432 IDAAAEVFSTMPERNLISWNSMIAGYAANGRAKQAINVFDQMRNVGFKPDNITFVSLLTA 491

Query: 544 CSQLSCLDIGQRIHD 588
           CS    +  G+   D
Sbjct: 492 CSHGGLISEGREYFD 506



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 63/211 (29%), Positives = 99/211 (46%)
 Frame = +1

Query: 22  WTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVE 201
           W +MI G+    +   A  FF  M    +E +  + +    AC     +  G S+H LV 
Sbjct: 115 WNTMIRGYGNARLPAVAFSFFLYMIRRRVEMDSRSFVFALKACEQFSGVYEGESVHCLVW 174

Query: 202 RNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKK 381
           + G    L + N +I  Y + G L+ A E+                              
Sbjct: 175 KMGFDYELLVRNGLIHFYSERGLLKHAREV------------------------------ 204

Query: 382 FFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSC 561
            F+E  +++VV+WT +I  YA      EA+E F  M +    P E TL++VLSACS++  
Sbjct: 205 -FDESSDKDVVTWTTMIDGYAAQKCSHEAMEVFKLMLLGDVEPNEVTLIAVLSACSEMGD 263

Query: 562 LDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           L++G+++H+  VK+K +  SL L NAL+ MY
Sbjct: 264 LEMGKKVHE-KVKEKCMGCSLSLHNALLVMY 293



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/139 (30%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+++SW SMI G+     A +A+  F++M + G +P+ +T ++L +ACS  G +S GR  
Sbjct: 445 RNLISWNSMIAGYAANGRAKQAINVFDQMRNVGFKPDNITFVSLLTACSHGGLISEGREY 504

Query: 187 HELVERN-GVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDV-FSWTSMINGYAKNG 360
            + +ER+ G+K        M+D+  + G LE+AY++   M ++    +W +++N    +G
Sbjct: 505 FDNMERSYGIKPQREHYACMVDLLGRTGLLEEAYKLITNMPMQPCEAAWGALLNACRMHG 564

Query: 361 KVDLAKKFFNEMPERNVVS 417
            V+LA+     +  RN++S
Sbjct: 565 NVELAR-----LSARNLLS 578


>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  216 bits (551), Expect = 4e-54
 Identities = 107/218 (49%), Positives = 155/218 (71%)
 Frame = +1

Query: 4   VRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           VRD+VSW SMI+G+V++  A EAL F+ +M   G++P+EVTMI + S+C+   DL LGR 
Sbjct: 170 VRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRE 229

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
            H  +E NG+K ++ L N+++DMY+KCG+LE A ++F+ M  + + SWT+M+ GYA++G 
Sbjct: 230 SHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGL 289

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           +D+A K F+EMP+++VV W A+I  Y   NR KEAL  F++M+     P E T+VS LSA
Sbjct: 290 LDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSA 349

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           CSQL  LD+G  IH  Y++K  + L++ LG ALIDMYA
Sbjct: 350 CSQLGALDVGIWIH-HYIEKHELSLNVALGTALIDMYA 386



 Score =  115 bits (288), Expect = 1e-23
 Identities = 59/165 (35%), Positives = 97/165 (58%), Gaps = 4/165 (2%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +DVV W +MI G+V  N   EAL  F +M +  + P+EVTM++  SACS  G L +G  I
Sbjct: 303 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI 362

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H  +E++ +  ++ L  ++IDMY KCG + KA ++F ++  R+  +WT++I+G A +G  
Sbjct: 363 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 422

Query: 367 DLAKKFFNEMPERNV----VSWTALISCYAQNNRPKEALETFHQM 489
             A  +F+EM + +V    V++  L+S        +E  + F QM
Sbjct: 423 HGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 467



 Score =  109 bits (273), Expect = 6e-22
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
 Frame = +1

Query: 19  SWTSMIDGFVQKNMADEALEFFEKMCS-SGLEPNEVTMITLFSACSLKGDLSLGRSIHEL 195
           SW   I GF+      EA+  ++++    G +P+  T   LF AC+    + +G  I   
Sbjct: 73  SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 132

Query: 196 VERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLA 375
           V   G    + + N++I + V CGDL+ A ++F++  VRD+ SW SMINGY + G     
Sbjct: 133 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG----- 187

Query: 376 KKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQL 555
                         W              EAL  + +M++EG  P E T++ V+S+C+QL
Sbjct: 188 --------------WA------------YEALNFYREMKVEGIKPDEVTMIGVVSSCAQL 221

Query: 556 SCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
             LD+G+  H  Y+++  + L++ L NAL+DMY
Sbjct: 222 EDLDLGRESH-CYIEENGLKLTVPLANALMDMY 253


>ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
           gi|77553539|gb|ABA96335.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa
           Japonica Group]
          Length = 704

 Score =  213 bits (543), Expect = 3e-53
 Identities = 103/218 (47%), Positives = 153/218 (70%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCS-SGLEPNEVTMITLFSACSLKGDLSLGRS 183
           RDVVSWT+++DG+ +  +ADEA   F +M    G+ PN VT++   SA    G L+ G  
Sbjct: 207 RDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIM 266

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +H+ V   GV  S+NL N+++DM+ KCG +  A E+F+ M+V+DV+SWTSM+N YAK G 
Sbjct: 267 LHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGD 326

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           ++ A++ F +MP RNVVSW+ +I+ Y+Q N+P+EA+  F +M   G  P ++TLVSVLSA
Sbjct: 327 LESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSA 386

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           C+QL CLD+G+ I++ Y+    + L++ LGNALIDM+A
Sbjct: 387 CAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFA 424



 Score =  114 bits (286), Expect = 2e-23
 Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW+ MI  + Q N  +EA+  F +M ++G++P + T++++ SAC+  G L LGR I
Sbjct: 340 RNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWI 399

Query: 187 HE-LVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +E  +  N +  ++NL N++IDM+ KCGD+ +                            
Sbjct: 400 YENYIVSNKIGLTVNLGNALIDMFAKCGDVGE---------------------------- 431

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
              A K F+EM ERNVVSW  +I  +A + + +EA+  F Q++ E   P + T + +L++
Sbjct: 432 ---ASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLAS 488

Query: 544 CSQLSCLDIGQR 579
           CS    +  G+R
Sbjct: 489 CSHSGLVSEGRR 500



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
 Frame = +1

Query: 28  SMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLK------GDLSLGRSIH 189
           +M+ GF++  +   AL  F ++    L  +  T +    A +        G  S G +IH
Sbjct: 106 TMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIH 165

Query: 190 ELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVD 369
                    C+           +KCG + ++  + N           ++++ YA +  +D
Sbjct: 166 ---------CAA----------LKCGFVGESVLVGN-----------ALVHFYANHKSLD 195

Query: 370 LAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQM-EIEGFPPTESTLVSVLSAC 546
            A K F+EMPER+VVSWT L+  YA+     EA   F +M  + G  P   TLV+ +SA 
Sbjct: 196 DAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAI 255

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
            Q+  L  G  +H  YV +  V  S+ L NAL+DM+
Sbjct: 256 GQMGLLAFGIMLHK-YVTEGGVARSVNLDNALVDMF 290



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW +MI        ++EA+  FE++    + P+++T + L ++CS  G +S GR  
Sbjct: 442 RNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRY 501

Query: 187 HELVER-NGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVR-DVFSWTSMINGYAKNG 360
            + +E    ++  +     MID+  K G LE+A+E+   M +  D   W +++N    +G
Sbjct: 502 FKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHG 561

Query: 361 KVDL 372
            V++
Sbjct: 562 NVEI 565


>gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
          Length = 632

 Score =  213 bits (543), Expect = 3e-53
 Identities = 103/218 (47%), Positives = 153/218 (70%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCS-SGLEPNEVTMITLFSACSLKGDLSLGRS 183
           RDVVSWT+++DG+ +  +ADEA   F +M    G+ PN VT++   SA    G L+ G  
Sbjct: 207 RDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIM 266

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +H+ V   GV  S+NL N+++DM+ KCG +  A E+F+ M+V+DV+SWTSM+N YAK G 
Sbjct: 267 LHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGD 326

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           ++ A++ F +MP RNVVSW+ +I+ Y+Q N+P+EA+  F +M   G  P ++TLVSVLSA
Sbjct: 327 LESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSA 386

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           C+QL CLD+G+ I++ Y+    + L++ LGNALIDM+A
Sbjct: 387 CAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFA 424



 Score =  114 bits (286), Expect = 2e-23
 Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW+ MI  + Q N  +EA+  F +M ++G++P + T++++ SAC+  G L LGR I
Sbjct: 340 RNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWI 399

Query: 187 HE-LVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +E  +  N +  ++NL N++IDM+ KCGD+ +                            
Sbjct: 400 YENYIVSNKIGLTVNLGNALIDMFAKCGDVGE---------------------------- 431

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
              A K F+EM ERNVVSW  +I  +A + + +EA+  F Q++ E   P + T + +L++
Sbjct: 432 ---ASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLAS 488

Query: 544 CSQLSCLDIGQR 579
           CS    +  G+R
Sbjct: 489 CSHSGLVSEGRR 500



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
 Frame = +1

Query: 28  SMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLK------GDLSLGRSIH 189
           +M+ GF++  +   AL  F ++    L  +  T +    A +        G  S G +IH
Sbjct: 106 TMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIH 165

Query: 190 ELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVD 369
                    C+           +KCG + ++  + N           ++++ YA +  +D
Sbjct: 166 ---------CAA----------LKCGFVGESVLVGN-----------ALVHFYANHKSLD 195

Query: 370 LAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQM-EIEGFPPTESTLVSVLSAC 546
            A K F+EMPER+VVSWT L+  YA+     EA   F +M  + G  P   TLV+ +SA 
Sbjct: 196 DAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAI 255

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
            Q+  L  G  +H  YV +  V  S+ L NAL+DM+
Sbjct: 256 GQMGLLAFGIMLHK-YVTEGGVARSVNLDNALVDMF 290



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+VVSW +MI        ++EA+  FE++    + P+++T + L ++CS  G +S GR  
Sbjct: 442 RNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRY 501

Query: 187 HELVER-NGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVR-DVFSWTSMINGYAKNG 360
            + +E    ++  +     MID+  K G LE+A+E+   M +  D   W +++N    +G
Sbjct: 502 FKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHG 561

Query: 361 KVDL 372
            V++
Sbjct: 562 NVEI 565


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 733

 Score =  212 bits (539), Expect = 9e-53
 Identities = 101/218 (46%), Positives = 152/218 (69%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +DVVSW S+I G  QK  A++ALE F +M +  ++PN+VTM+ + SAC+ K DL  GR +
Sbjct: 190 KDVVSWNSLITGLAQKGCAEKALELFRRMDAESVKPNDVTMVGVLSACTKKLDLEFGRWV 249

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
              +ERNG+  +L L N+M+DMY KCG LE A  +F+ M+ +D+ +WT+M++GYAK G+ 
Sbjct: 250 CSYIERNGISVNLTLSNAMLDMYAKCGSLEDAKRLFDMMEEKDIVTWTTMLDGYAKLGEY 309

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGF-PPTESTLVSVLSA 543
           + A++  + MP +++ +W ALIS Y QN +PKEAL  +H++++     P E TLVS LSA
Sbjct: 310 EAARRVLDIMPRQDIAAWNALISGYEQNGKPKEALAIYHELKLSKIAKPDEITLVSTLSA 369

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           C+QL  +DIG+ IH  YVK++ + L+  L  +LIDMY+
Sbjct: 370 CAQLGAMDIGRGIH-AYVKEQGIQLNCHLTTSLIDMYS 406



 Score =  115 bits (289), Expect = 9e-24
 Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGL-EPNEVTMITLFSACSLKGDLSLGRS 183
           +D+ +W ++I G+ Q     EAL  + ++  S + +P+E+T+++  SAC+  G + +GR 
Sbjct: 322 QDIAAWNALISGYEQNGKPKEALAIYHELKLSKIAKPDEITLVSTLSACAQLGAMDIGRG 381

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           IH  V+  G++ + +L  S+IDMY KCGD+ KA E+F  ++ RDVF W++MI G A +G 
Sbjct: 382 IHAYVKEQGIQLNCHLTTSLIDMYSKCGDVNKALEVFYSVERRDVFVWSAMIAGLAMHGH 441

Query: 364 VDLAKKFFNEMPER----NVVSWTALISCYAQNNRPKEALETFHQME-IEGFPP 510
              A   F+ M E     N V++T ++   +     KE     +QME + G PP
Sbjct: 442 GRAAIDLFSRMQEATMKPNSVTFTNVLCACSHAGLVKEGKTFLNQMEPVYGIPP 495



 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCS-SGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  +       + +  F +M   S   PN+ T   +  A +    + +G+++
Sbjct: 89  NLYTWNTLIRVYASGPEPLQGILIFLRMVDESPYYPNKFTFPFVIKAAAEIVSVCVGQAL 148

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +V +  +   + + NS+I +Y+ C                               G +
Sbjct: 149 HGMVIKASLGADVFISNSLIHLYLSC-------------------------------GDL 177

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
           D A + F  + E++VVSW +LI+  AQ    ++ALE F +M+ E   P + T+V VLSAC
Sbjct: 178 DSAYRVFMMIGEKDVVSWNSLITGLAQKGCAEKALELFRRMDAESVKPNDVTMVGVLSAC 237

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           ++   L+ G+ +   Y+++  + ++L L NA++DMYA
Sbjct: 238 TKKLDLEFGRWVCS-YIERNGISVNLTLSNAMLDMYA 273


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  211 bits (538), Expect = 1e-52
 Identities = 105/220 (47%), Positives = 146/220 (66%), Gaps = 1/220 (0%)
 Frame = +1

Query: 1   SVRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR 180
           S +DVVSW SMI  F Q N  ++ALE F KM    + PN VTM+ + SAC+ K DL  GR
Sbjct: 188 SCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGR 247

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            +   +ER G+K  L L N+M+DMY KCG ++ A ++F++M  RDVFSWT M++GYAK G
Sbjct: 248 WVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMG 307

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGF-PPTESTLVSVL 537
             D A+  FN MP + + +W  LIS Y QN +PKEAL  F+++++     P E TLVS L
Sbjct: 308 DYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTL 367

Query: 538 SACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           SAC+QL  +D+G  IH  Y+K++ + L+  L ++L+DMYA
Sbjct: 368 SACAQLGAIDLGGWIH-VYIKREGIVLNCHLISSLVDMYA 406



 Score =  110 bits (276), Expect = 3e-22
 Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 5/168 (2%)
 Frame = +1

Query: 4   VRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGL-EPNEVTMITLFSACSLKGDLSLGR 180
           V+++ +W  +I  + Q     EAL  F ++  S + +P+EVT+++  SAC+  G + LG 
Sbjct: 321 VKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGG 380

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            IH  ++R G+  + +L++S++DMY KCG LEKA E+F  ++ RDV+ W++MI G   +G
Sbjct: 381 WIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHG 440

Query: 361 KVDLAKKFFNEMPER----NVVSWTALISCYAQNNRPKEALETFHQME 492
           +   A   F EM E     N V++T ++   +      E    FH+ME
Sbjct: 441 RGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEME 488



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLE-PNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  +   +   ++   F  +     + PN+ T   +  A S      +G ++
Sbjct: 89  NLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAV 148

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +  +      L ++NS++  Y  CGDL                               
Sbjct: 149 HGMAIKLSFGMDLYILNSLVRFYGACGDLS------------------------------ 178

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
            +A++ F  +  ++VVSW ++IS +AQ N P++ALE F +ME E   P   T+V VLSAC
Sbjct: 179 -MAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSAC 237

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           ++   L+ G+ +   Y+++K + + L L NA++DMY
Sbjct: 238 AKKLDLEFGRWVCS-YIERKGIKVDLTLCNAMLDMY 272



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
 Frame = +1

Query: 7    RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
            RDV  W++MI G         A++ F +M  + ++PN VT   +  ACS  G +  GR  
Sbjct: 424  RDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVF 483

Query: 187  -HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFS-WTSMINGYAKNG 360
             HE+    GV   +     M+D+  + G LE+A E+ N+M      S W +++   + + 
Sbjct: 484  FHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHM 543

Query: 361  KV---DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVS 531
             V   +LA     ++  RN  +   L + YA+  R ++  E    M          T + 
Sbjct: 544  NVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLM--------RDTELK 595

Query: 532  VLSACSQLSCLDIGQRIHDFYVKKKWVPLS 621
                CS    ++    +H+F V     PLS
Sbjct: 596  KEPGCSS---IEANGNVHEFLVGDNTHPLS 622


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  211 bits (537), Expect = 2e-52
 Identities = 104/217 (47%), Positives = 148/217 (68%), Gaps = 1/217 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           RDVVSW SMI  FVQ    +EALE F++M +  ++PN +TM+ + SAC+ K D   GR +
Sbjct: 200 RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWV 259

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H  +ERN +  SL L N+M+DMY KCG +E A  +F++M  +D+ SWT+M+ GYAK G+ 
Sbjct: 260 HSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEY 319

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEI-EGFPPTESTLVSVLSA 543
           D A+  F+ MP +++ +W ALIS Y Q  +PKEALE FH++++ +   P E TLVS LSA
Sbjct: 320 DAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSA 379

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           C+QL  +D+G  IH  Y+KK+ + L+  L  +LIDMY
Sbjct: 380 CAQLGAMDLGGWIH-VYIKKQGMKLNCHLTTSLIDMY 415



 Score =  112 bits (279), Expect = 1e-22
 Identities = 59/168 (35%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKM-CSSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           +D+ +W ++I  + Q     EALE F ++  S   +P+EVT+++  SAC+  G + LG  
Sbjct: 332 QDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGW 391

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           IH  +++ G+K + +L  S+IDMY KCGDL+KA  +F+ ++ +DVF W++MI G A +G 
Sbjct: 392 IHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGH 451

Query: 364 VDLAKKFFNEMPE----RNVVSWTALISCYAQNNRPKEALETFHQMEI 495
              A   F++M E     N V++T ++   +     +E    F+QME+
Sbjct: 452 GKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMEL 499



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLE-PNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  +   +   ++L  F +M     + P++ T   L  A S   +L  G++ 
Sbjct: 99  NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +V    +K  L                             DVF   S+I+ YAK G++
Sbjct: 159 HGMV----IKVLLG---------------------------SDVFILNSLIHFYAKCGEL 187

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
            L  + F  +P R+VVSW ++I+ + Q   P+EALE F +ME +   P   T+V VLSAC
Sbjct: 188 GLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSAC 247

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           ++ S  + G+ +H  Y+++  +  SL L NA++DMY
Sbjct: 248 AKKSDFEFGRWVHS-YIERNRIGESLTLSNAMLDMY 282


>ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
           gi|241943785|gb|EES16930.1| hypothetical protein
           SORBIDRAFT_08g008260 [Sorghum bicolor]
          Length = 655

 Score =  211 bits (536), Expect = 2e-52
 Identities = 102/218 (46%), Positives = 150/218 (68%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMC-SSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           RDVVSWT+++DG+ +  + DEA   F +M  + G  PNEVT++   SA    G L LGR 
Sbjct: 195 RDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRM 254

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           +H+ V  +GV+ S+NL N+++DM+ KCG +  A EIF+ M ++DV+SWTSM++ YAK G 
Sbjct: 255 VHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGD 314

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           ++ A K F E+P RN VSW+ +++ Y+Q N P+EA+  F+ M   G  P ++TLVSVLSA
Sbjct: 315 LENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSA 374

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           C+QL CLD+G+ ++D Y+    V L++ L NA IDM+A
Sbjct: 375 CAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFA 412



 Score =  108 bits (271), Expect = 1e-21
 Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           R+ VSW+ M+  + Q N+ +EA+  F  M ++G+EP + T++++ SAC+  G L +GR +
Sbjct: 328 RNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCL 387

Query: 187 HEL-VERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           ++  +  + V+ ++NL N+ IDM+ KCGD                               
Sbjct: 388 YDAYIVSHKVELTVNLSNAFIDMFAKCGD------------------------------- 416

Query: 364 VDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSA 543
           V  A + F  M ++NVVSW  +I  +A + + +EAL  F + +  G  P E T + VLSA
Sbjct: 417 VGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSA 476

Query: 544 CSQLSCLDIGQ 576
           CS    +  G+
Sbjct: 477 CSHSGLVSEGR 487



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = +1

Query: 310 RDVFSWTSMINGYAKNGKVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQM 489
           + V    ++++ YA +  +  A+K F+EM +R+VVSWT L+  YA+   P EA   F +M
Sbjct: 164 QSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRM 223

Query: 490 EIEGFP-PTESTLVSVLSACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
            + G   P E TLV+  SA  Q+  L +G+ +H   V +  V +S+ L NAL+DM+
Sbjct: 224 VVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVV-ESGVRMSVNLENALVDMF 278



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR-S 183
           ++VVSW +MI        ++EAL  F+K  + G+ P+E+T I + SACS  G +S GR  
Sbjct: 430 KNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYH 489

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDV-RDVFSWTSMINGYAKNG 360
             E+    G++        MID+  K G LE+A+E+   M V  D   W +++N    +G
Sbjct: 490 FKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHG 549

Query: 361 KVDLAK 378
            V++ K
Sbjct: 550 NVEIGK 555


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score =  210 bits (535), Expect = 3e-52
 Identities = 104/218 (47%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +DVVSW SMI GFV     D+ALE F+ M +  + PN+VTM+ + SAC+ K DL  GR +
Sbjct: 196 KDVVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRV 255

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
              +ERNG+  +L + N+M+DMYVK G LE A  +F++M+ +D+FSWT+MI+GYAK    
Sbjct: 256 CHYIERNGINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDF 315

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEI-EGFPPTESTLVSVLSA 543
           D A+  F+ MP +++ +W  LIS Y Q+ +PKEAL  FH++++ +   P E TLVS LSA
Sbjct: 316 DAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSA 375

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           C+QL  +DIG  IH  Y+KK+ + L+  L  +LIDMY+
Sbjct: 376 CAQLGAIDIGGWIH-VYIKKQDIKLNCHLTTSLIDMYS 412



 Score =  110 bits (276), Expect = 3e-22
 Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKM-CSSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           +D+ +W  +I  + Q     EAL  F ++  S   +P+EVT+++  SAC+  G + +G  
Sbjct: 328 QDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGW 387

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           IH  +++  +K + +L  S+IDMY KCG++EKA +IF  +D RDVF W++MI G A +G+
Sbjct: 388 IHVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGR 447

Query: 364 VDLAKKFFNEMPER----NVVSWTALISCYAQNNRPKEALETFHQMEIEGF 504
              A   F EM E     N V++T L+   +      E    F+QME   F
Sbjct: 448 GRAAIDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGRMFFNQMESSTF 498



 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLE-PNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  F        +L  F +M     + PN+ T   +  A +    L   ++I
Sbjct: 95  NLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKAAAGVASLPFSQAI 154

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +  +  +   L ++NS+I  Y  CGDL+ AY +F +++ +DV SW SMI G+   G  
Sbjct: 155 HGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGG-- 212

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
                                  C      P +ALE F  M+ E   P + T+V VLSAC
Sbjct: 213 -----------------------C------PDKALELFQLMKAENVRPNDVTMVGVLSAC 243

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           ++   L+ G+R+   Y+++  + ++L + NA++DMY
Sbjct: 244 AKKMDLEFGRRV-CHYIERNGINVNLTVSNAMLDMY 278


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score =  210 bits (534), Expect = 3e-52
 Identities = 102/218 (46%), Positives = 146/218 (66%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +DVVSW SMI  FV+ +  DEA + F +M    L+PN++TM+ +  AC  K D+  GR +
Sbjct: 196 KDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLKPNDITMVGVLCACGKKADIEFGRWL 255

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
              ++RNG+  +L L N+M+DMYVKCG +E A E+F++M  RDV SWT+M++GY + GK 
Sbjct: 256 CSYIQRNGIAVNLTLNNAMLDMYVKCGSVEDAKELFDKMPERDVVSWTTMLDGYTRMGKY 315

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEI-EGFPPTESTLVSVLSA 543
           D A + F  MP +++ +W  LIS Y QN  PKEAL  FH++++ +   P E TLVS LSA
Sbjct: 316 DEALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVFHKLQVSKSAKPDEVTLVSSLSA 375

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           CSQL  +D G+ IH  Y+K++ + L+  L  +LIDMYA
Sbjct: 376 CSQLGSIDPGRWIH-IYIKRQGIKLNCHLTTSLIDMYA 412



 Score =  122 bits (307), Expect = 7e-26
 Identities = 77/251 (30%), Positives = 122/251 (48%), Gaps = 38/251 (15%)
 Frame = +1

Query: 7    RDVVSWTSMIDGFVQKNMADEALEFFEKM------------------------------- 93
            RDVVSWT+M+DG+ +    DEAL  FE M                               
Sbjct: 297  RDVVSWTTMLDGYTRMGKYDEALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVFHKL 356

Query: 94   -CSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVERNGVKCSLNLMNSMIDMYVKCGD 270
              S   +P+EVT+++  SACS  G +  GR IH  ++R G+K + +L  S+IDMY KCGD
Sbjct: 357  QVSKSAKPDEVTLVSSLSACSQLGSIDPGRWIHIYIKRQGIKLNCHLTTSLIDMYAKCGD 416

Query: 271  LEKAYEIFNQMDVRDVFSWTSMINGYAKNG----KVDLAKKFFNEMPERNVVSWTALISC 438
            LEKA E+F+ ++ +DV+ W++MI G A +G     +DL  +      + N V++T ++  
Sbjct: 417  LEKALEVFDSVERKDVYVWSAMIAGLAMHGCGRAAIDLFYEMLKAKVKPNAVTFTNILCA 476

Query: 439  YAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSACSQLSCLDIGQRIHDF--YVKKKWV 612
             +     +E    F+QME     P    +  V      +  L    R+ D   +++K  +
Sbjct: 477  CSHTGLLEEGTSLFYQME-----PVYKVVPGVKHYACMVDMLGRSGRLKDSLEFIEKMPI 531

Query: 613  PLSLILGNALI 645
            P +  +  AL+
Sbjct: 532  PPTASIWGALL 542



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLE-PNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  +   +   +++  F +M     E PN+ T   +  A S      +GR  
Sbjct: 95  NLYTWNTIIRAYASSSDPIQSIVVFLRMLDQCCESPNKYTYPFVLKAASELKASRVGRGF 154

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +V ++ +   + ++NS++  Y  C DL                               
Sbjct: 155 HGMVMKSSLASDVFILNSLVHFYGSCDDL------------------------------- 183

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
           D A + F  +P ++VVSW ++I  + + + P EA + F +ME+E   P + T+V VL AC
Sbjct: 184 DSAYRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLKPNDITMVGVLCAC 243

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
            + + ++ G+ +   Y+++  + ++L L NA++DMY
Sbjct: 244 GKKADIEFGRWLCS-YIQRNGIAVNLTLNNAMLDMY 278


>ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
           gi|241918518|gb|EER91662.1| hypothetical protein
           SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score =  210 bits (534), Expect = 3e-52
 Identities = 102/219 (46%), Positives = 151/219 (68%), Gaps = 2/219 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSG--LEPNEVTMITLFSACSLKGDLSLGR 180
           RDVVSW ++I G+V+  +  EALE F ++   G  + P+EVTMI   S C+  GDL LG+
Sbjct: 185 RDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGK 244

Query: 181 SIHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNG 360
            +HE V+  GV+C++ LMN+++DMYVKCG LE A  +F ++D + V SWT+MI G+A+ G
Sbjct: 245 RLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLG 304

Query: 361 KVDLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLS 540
            ++ A+  F+EMPER+V  W AL++ Y QN + KEA+  FH+M+     P E T+V++LS
Sbjct: 305 MMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLS 364

Query: 541 ACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           ACSQL  L++G  +H  Y+ +  + LS+ LG +L+DMYA
Sbjct: 365 ACSQLGALEMGMWVH-HYIDRHQLYLSVALGTSLVDMYA 402



 Score =  117 bits (294), Expect = 2e-24
 Identities = 66/215 (30%), Positives = 107/215 (49%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           RDV  W +++ G+VQ     EA+  F +M  S ++PNE+TM+ L SACS  G L +G  +
Sbjct: 319 RDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWV 378

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H  ++R+ +  S+ L  S++DMY KCG+++KA  IF ++  ++  +WT+MI G A +G  
Sbjct: 379 HHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHA 438

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
           D                               EA+E F +M   G  P E T + VLSAC
Sbjct: 439 D-------------------------------EAIEYFQRMIDLGLQPDEITFIGVLSAC 467

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDM 651
                +  G++      +K  +   +   + +ID+
Sbjct: 468 CHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDL 502



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
 Frame = +1

Query: 91  MCSSGLEPNEVTMITLFSACSLKGDLSLGRSIHELVERNGVKCSLNLMNSMIDMYVKCGD 270
           +CSS   P+ +T   L  AC+       G ++   V++ G                    
Sbjct: 112 LCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSA----------------- 154

Query: 271 LEKAYEIFNQMDVRDVFSWTSMINGYAKNGKVDLAKKFFNEMPERNVVSWTALISCYAQN 450
                         DVF   + ++ ++ +G + LA++ F+E P R+VVSW  LI  Y ++
Sbjct: 155 --------------DVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRS 200

Query: 451 NRPKEALETFHQMEIEG--FPPTESTLVSVLSACSQLSCLDIGQRIHDFYVKKKWVPLSL 624
             P+EALE F ++  +G    P E T++  +S C+Q+  L++G+R+H+F V  K V  ++
Sbjct: 201 GLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEF-VDSKGVRCTV 259

Query: 625 ILGNALIDMY 654
            L NA++DMY
Sbjct: 260 RLMNAVMDMY 269



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
 Frame = +1

Query: 7    RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
            ++ ++WT+MI G      ADEA+E+F++M   GL+P+E+T I + SAC   G +  GR  
Sbjct: 420  KNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQF 479

Query: 187  HELV-ERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVR-DVFSWTSMINGYAKNG 360
              L+ E+  ++  +   + MID+  + G L++A ++ N M +  D   W ++      +G
Sbjct: 480  FSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHG 539

Query: 361  KVDLAKKFFNEMPERNVVS---WTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVS 531
             + L +K   ++ E +      +  L + YA+ N  K+A +    M   G        V 
Sbjct: 540  NITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLG--------VE 591

Query: 532  VLSACSQLSCLDIGQRIHDFYVKKK 606
             +  CS   C+++   +H+F VK K
Sbjct: 592  KVPGCS---CIELNGVVHEFIVKDK 613


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score =  210 bits (534), Expect = 3e-52
 Identities = 101/218 (46%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +D+VSW SMI GFVQ    +EAL+ F++M      PN VTM+ + SAC+ + DL  GR  
Sbjct: 195 KDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWA 254

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
            + +ERNG+  +L L N+M+DMYVKCG LE A  +F++M+ +D+ SWT+MI+GYAK G  
Sbjct: 255 CDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDY 314

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEI-EGFPPTESTLVSVLSA 543
           D A++ F+ MP  ++ +W ALIS Y QN +PKEAL  F ++++ +   P E TL S L+A
Sbjct: 315 DAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAA 374

Query: 544 CSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
           C+QL  +D+G  IH  Y+KK+ + L+  +  +LIDMY+
Sbjct: 375 CAQLGAMDLGGWIH-VYIKKQGIKLNFHITTSLIDMYS 411



 Score =  112 bits (281), Expect = 8e-23
 Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKM-CSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           D+ +W ++I  + Q     EAL  F ++  +   +PNEVT+ +  +AC+  G + LG  I
Sbjct: 328 DITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWI 387

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H  +++ G+K + ++  S+IDMY KCG LEKA E+F  ++ RDVF W++MI G A +G  
Sbjct: 388 HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHG 447

Query: 367 DLAKKFFNEMPER----NVVSWTALISCYAQNNRPKEALETFHQME-IEGFPPTESTLVS 531
             A   F++M E     N V++T L+   + +    E    F+QM  + G  P       
Sbjct: 448 RAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYAC 507

Query: 532 VLSACSQLSCLD 567
           ++    +  CL+
Sbjct: 508 MVDILGRAGCLE 519



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLE-PNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  F       + L  F +M       PN  T   +  A +    L  G++I
Sbjct: 94  NLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAI 153

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +V    +K S                              D+F   S+I+ Y+  G +
Sbjct: 154 HGMV----MKASFG---------------------------SDLFISNSLIHFYSSLGDL 182

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
           D A   F+++ E+++VSW ++IS + Q   P+EAL+ F +M++E   P   T+V VLSAC
Sbjct: 183 DSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSAC 242

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           ++   L+ G+   D Y+++  + ++LIL NA++DMY
Sbjct: 243 AKRIDLEFGRWACD-YIERNGIDINLILSNAMLDMY 277



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
 Frame = +1

Query: 7    RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGR-S 183
            RDV  W++MI G         A++ F KM  + ++PN VT   L  ACS  G +  GR  
Sbjct: 429  RDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLF 488

Query: 184  IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFS-WTSMINGYAKNG 360
             +++    GV         M+D+  + G LE+A E+  +M +    S W +++      G
Sbjct: 489  FNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYG 548

Query: 361  KVDLAKKFFNEMPE---RNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVS 531
             V+LA+   + + E    N  ++  L + YA+  +          M++ G          
Sbjct: 549  NVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSG---------- 598

Query: 532  VLSACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMYA 657
             L      S +++   IH+F V     PLS  + + L ++ A
Sbjct: 599  -LEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVA 639


>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Citrus sinensis]
          Length = 746

 Score =  209 bits (533), Expect = 5e-52
 Identities = 102/216 (47%), Positives = 144/216 (66%)
 Frame = +1

Query: 7   RDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           +DVVSW SMI GFVQ    ++A+E + +M    ++P+EVTM+ + SAC+ K DL  GR +
Sbjct: 204 KDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWV 263

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
              +E+NG+K  L L N+M+DMYVKCG LE A  +F++M+ +D+ SWT+MI+GYAK G+ 
Sbjct: 264 CSYIEKNGIKMDLTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIVSWTTMIDGYAKLGEF 323

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
           D A      +P + + +W ALIS Y QN +P EAL  FH+   +   P E T VSVLSAC
Sbjct: 324 DAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVNPDEFTFVSVLSAC 383

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           +QL  +DIG +IH   +KK+ + L+  L  +LIDMY
Sbjct: 384 AQLGAMDIGVQIH-AKMKKQGIKLNCYLTTSLIDMY 418



 Score =  115 bits (287), Expect = 2e-23
 Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 5/218 (2%)
 Frame = +1

Query: 4   VRDVVSWTSMIDGFVQKNMADEALEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRS 183
           ++ + +W ++I  + Q    +EAL  F +  S  + P+E T +++ SAC+  G + +G  
Sbjct: 335 IQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQ 394

Query: 184 IHELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGK 363
           IH  +++ G+K +  L  S+IDMY KCG+L+KA E+F+ +  RDVF W++MI G+A  G+
Sbjct: 395 IHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGR 454

Query: 364 VDLAKKFFNEMPER----NVVSWTALISCYAQNNRPKEALETFHQME-IEGFPPTESTLV 528
              A   F+ M E     N V++T ++   + +    E    F+QME + G  P      
Sbjct: 455 GRDALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYT 514

Query: 529 SVLSACSQLSCLDIGQRIHDFYVKKKWVPLSLILGNAL 642
            ++    +   LD      +F  K   VP + + G  L
Sbjct: 515 CMVDMLGRAGLLD---EAVEFIEKMPIVPGASVWGALL 549



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
 Frame = +1

Query: 10  DVVSWTSMIDGFVQKNMADEA-LEFFEKMCSSGLEPNEVTMITLFSACSLKGDLSLGRSI 186
           ++ +W ++I  +       ++ + F + + +S   PNE T   +  A +      +G++I
Sbjct: 103 NLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAI 162

Query: 187 HELVERNGVKCSLNLMNSMIDMYVKCGDLEKAYEIFNQMDVRDVFSWTSMINGYAKNGKV 366
           H +V ++  +  L + NS+I  Y  C                               G +
Sbjct: 163 HGMVIKSSFEDDLFISNSLIHFYAIC-------------------------------GDL 191

Query: 367 DLAKKFFNEMPERNVVSWTALISCYAQNNRPKEALETFHQMEIEGFPPTESTLVSVLSAC 546
            +A   F  + +++VVSW ++IS + Q    ++A+E + +ME+E   P E T+V+VLSAC
Sbjct: 192 AMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSAC 251

Query: 547 SQLSCLDIGQRIHDFYVKKKWVPLSLILGNALIDMY 654
           ++   L+ G+ +   Y++K  + + L L NA++DMY
Sbjct: 252 AKKRDLEFGRWVCS-YIEKNGIKMDLTLSNAMLDMY 286