BLASTX nr result

ID: Catharanthus23_contig00035226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035226
         (355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230661.1| PREDICTED: uncharacterized protein LOC101255...    81   2e-13

>ref|XP_004230661.1| PREDICTED: uncharacterized protein LOC101255341 [Solanum
           lycopersicum]
          Length = 389

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
 Frame = -3

Query: 350 FLGRQ-----KNLLKNIYWSGFSKSWKSPSKQCNPKNGKAAPWILLSSPEN-NSPAAPKN 189
           F+GRQ       L++NI + G +KSW++  KQC+ KN +  PW+ +S  ++       ++
Sbjct: 34  FMGRQHPDETNRLMQNICFPGVTKSWRAVPKQCSNKNAQ-LPWLEISDKDHFFQSKTQEH 92

Query: 188 ALSIPFLPGEYYWFSRRRSPE-PFMYFKGCSHGQIVT-ATEIITENYILHSPFWSWSYMP 15
            L+IPF  GEY+W+SRR S + P+ +F GCSHG IV    +  T   ++ +  +++  +P
Sbjct: 93  TLTIPFRLGEYWWYSRRSSWDVPWTHFHGCSHGLIVAGGKDPATYCLLIPTSRFTYRSIP 152

Query: 14  NWDP 3
            WDP
Sbjct: 153 TWDP 156


Top