BLASTX nr result

ID: Catharanthus23_contig00035206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035206
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]    58   1e-06
emb|CBI38550.3| unnamed protein product [Vitis vinifera]               58   1e-06

>ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -3

Query: 235 RRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQTWLEKLYKKKS 95
           +RLF EMNEKGFIP + TL+ IS  +AK GK  DAQ  L KLYKKK+
Sbjct: 748 KRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKT 794


>emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -3

Query: 235 RRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQTWLEKLYKKKS 95
           +RLF EMNEKGFIP + TL+ IS  +AK GK  DAQ  L KLYKKK+
Sbjct: 748 KRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKT 794


>emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = -3

Query: 235 RRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQTWLEKLYKKK 98
           +RLF EMNEKGFIP + TL+ IS  +AK GK  DAQ  L KLYKKK
Sbjct: 748 KRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK 793


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