BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035190
         (298 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250825.1| PREDICTED: pre-mRNA-processing protein 40A-l...   115   6e-24
ref|XP_006352104.1| PREDICTED: pre-mRNA-processing protein 40A-l...   114   1e-23
ref|XP_006352103.1| PREDICTED: pre-mRNA-processing protein 40A-l...   114   1e-23
gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobr...   111   1e-22
gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobr...   111   1e-22
gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobr...   111   1e-22
gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobr...   111   1e-22
gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobr...   111   1e-22
gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobr...   111   1e-22
gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobr...   111   1e-22
gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus pe...   109   3e-22
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   107   1e-21
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   106   4e-21
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...   103   2e-20
ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 hom...   102   5e-20
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l...   101   1e-19
ref|XP_002313923.2| hypothetical protein POPTR_0009s08880g [Popu...   100   2e-19
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...   100   2e-19
gb|ESW32934.1| hypothetical protein PHAVU_001G029800g [Phaseolus...   100   3e-19

>ref|XP_004250825.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
           lycopersicum]
          Length = 1044

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
 Frame = +3

Query: 12  FPVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIPKPETG----EKVPSVWIEHTAR 179
           FP   QPW    NQ++ + T  Q TGE ++  +   +P+   G    E  PS WIEHT+R
Sbjct: 145 FPSGVQPWMPTSNQNVNSATTMQNTGELAAPLV---VPEANNGVDSVETTPSDWIEHTSR 201

Query: 180 NGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           NGKKYYYNR T++SSWEKPLELMT +ERADASTDWRE T
Sbjct: 202 NGKKYYYNRRTRISSWEKPLELMTEMERADASTDWREFT 240


>ref|XP_006352104.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
           tuberosum]
          Length = 1003

 Score =  114 bits (286), Expect = 1e-23
 Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
 Frame = +3

Query: 12  FPVEGQPWASAGNQSITTFTPAQQTGEQSSTAI-NDAIPKPETGEKVPSVWIEHTARNGK 188
           FP   QPW    N ++ + T  Q TGE ++  +  +A  + ++ E  PS WIEHT+RNGK
Sbjct: 145 FPSGVQPWMPTSNHNVNSATTMQNTGELAAPLVLPEANNRVDSAETTPSDWIEHTSRNGK 204

Query: 189 KYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           KYYYNR T++SSWEKPLELMT +ERADASTDWRE T
Sbjct: 205 KYYYNRRTRISSWEKPLELMTEMERADASTDWREFT 240


>ref|XP_006352103.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
           tuberosum]
          Length = 1003

 Score =  114 bits (286), Expect = 1e-23
 Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
 Frame = +3

Query: 12  FPVEGQPWASAGNQSITTFTPAQQTGEQSSTAI-NDAIPKPETGEKVPSVWIEHTARNGK 188
           FP   QPW    N ++ + T  Q TGE ++  +  +A  + ++ E  PS WIEHT+RNGK
Sbjct: 145 FPSGVQPWMPTSNHNVNSATTMQNTGELAAPLVLPEANNRVDSAETTPSDWIEHTSRNGK 204

Query: 189 KYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           KYYYNR T++SSWEKPLELMT +ERADASTDWRE T
Sbjct: 205 KYYYNRRTRISSWEKPLELMTEMERADASTDWREFT 240


>gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
          Length = 789

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
          Length = 787

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
          Length = 774

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
           gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
           40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQ------SSTAINDAIPKPETGEKVPSVWIEHTA 176
           PV GQPW S+GNQS++   P QQTG+Q      + TA N  I  P +     S W EHT+
Sbjct: 176 PVAGQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSA----SDWQEHTS 231

Query: 177 RNGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
            +G++YYYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 232 ADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 271


>gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/95 (54%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = +3

Query: 18  VEGQPWASAGNQSITTFTPAQQTGEQ--SSTAINDAIPKPETGEKVPSVWIEHTARNGKK 191
           V GQPW S+GNQ     TP  Q+G+Q  S+T  + A+  P   ++  S W EHT+ +G++
Sbjct: 176 VTGQPWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRR 235

Query: 192 YYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           YY+NR TK SSWEKPLELMTP+ERADAST W+E+T
Sbjct: 236 YYFNRRTKQSSWEKPLELMTPMERADASTVWKEYT 270


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
           gi|548831471|gb|ERM94279.1| hypothetical protein
           AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
 Frame = +3

Query: 24  GQPWASAGNQSITTFTPAQQTGEQSSTAINDA---IPKPETGEKVPSVWIEHTARNGKKY 194
           GQPW S+G+QS T   P  Q  +QSS A + A    P+P    +  S W EHT+ +G++Y
Sbjct: 167 GQPWLSSGSQSTTVIPPVVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRY 226

Query: 195 YYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           YYN+ T+ SSWEKPLELMTPIERADAST W+E T
Sbjct: 227 YYNKKTRQSSWEKPLELMTPIERADASTVWKEFT 260


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  107 bits (267), Expect = 2e-21
 Identities = 54/95 (56%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQSS-TAINDAIPKPETGEKVPSVWIEHTARNGKK 191
           PV GQPW S+G+QS    TP  Q G+Q S TA   A   P    +  S W EHT+ +G++
Sbjct: 174 PVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPAGNVPNPTHQSSSDWQEHTSADGRR 233

Query: 192 YYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           YYYN+ T++SSWEKPLELMTPIERADAST W+E T
Sbjct: 234 YYYNKKTRLSSWEKPLELMTPIERADASTVWKEFT 268


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIPK---PETGEKVPSVWIEHTARNG 185
           PV GQPW S+G+QS    TP  Q G+Q S   +  +     P    +  S W EHT+ +G
Sbjct: 176 PVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNVPNPTHQSSSDWQEHTSADG 235

Query: 186 KKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           ++YYYN+ T++SSWEKPLELMTPIERADAST W+E T
Sbjct: 236 RRYYYNKKTRLSSWEKPLELMTPIERADASTVWKEFT 272


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
           gi|223538712|gb|EEF40313.1| protein binding protein,
           putative [Ricinus communis]
          Length = 956

 Score =  103 bits (257), Expect = 2e-20
 Identities = 54/94 (57%), Positives = 63/94 (67%)
 Frame = +3

Query: 9   SFPVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIPKPETGEKVPSVWIEHTARNGK 188
           S P  G   +S+ NQSIT  TP Q  GEQSS   ND  P  +  E+    W EH A NG+
Sbjct: 155 SIPAGGLAGSSSVNQSITPVTPMQLNGEQSSVT-NDLHPT-KPNEETTMDWKEHLAANGR 212

Query: 189 KYYYNRITKVSSWEKPLELMTPIERADASTDWRE 290
           +YYYN+ T+ SSWEKP ELMTPIERADASTDW+E
Sbjct: 213 RYYYNKRTRQSSWEKPFELMTPIERADASTDWKE 246


>ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like
           [Brachypodium distachyon]
          Length = 998

 Score =  102 bits (254), Expect = 5e-20
 Identities = 50/97 (51%), Positives = 65/97 (67%)
 Frame = +3

Query: 6   SSFPVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIPKPETGEKVPSVWIEHTARNG 185
           +S P   Q W +A  QS+    PA Q G QS +A   ++P   + E   S W EHT+++G
Sbjct: 141 TSVPPVAQSWGTALGQSVPLVPPAVQPGHQSMSA---SLPSVSSTEPSSSDWQEHTSQDG 197

Query: 186 KKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           KKYYYN+ T+ SSWEKP ELMTP+ERADAST+W+E T
Sbjct: 198 KKYYYNKRTRQSSWEKPAELMTPLERADASTEWKEFT 234


>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 997

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/94 (52%), Positives = 62/94 (65%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIPKPETGEKVPSVWIEHTARNGKKY 194
           P  GQPW S+ +QS    T  Q  G QSS A +       T ++  S W EHT+ +G++Y
Sbjct: 145 PPSGQPWPSSASQSAVAVTSVQPAGVQSSGATSTDAVINATNQQSLSDWQEHTSADGRRY 204

Query: 195 YYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           YYN+ T+ SSWEKPLELM+PIERADAST W+E T
Sbjct: 205 YYNKRTRQSSWEKPLELMSPIERADASTVWKEFT 238


>ref|XP_002313923.2| hypothetical protein POPTR_0009s08880g [Populus trichocarpa]
           gi|550331348|gb|EEE87878.2| hypothetical protein
           POPTR_0009s08880g [Populus trichocarpa]
          Length = 888

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
 Frame = +3

Query: 9   SFPVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIP---KPETGEKVPSVWIEHTAR 179
           S P  GQP   + NQ+     P Q  GEQSS    + +    +P   E+  + W EHT+ 
Sbjct: 62  SIPSGGQPALPSMNQNTALVLPIQHNGEQSSITAANVLATGIQPRPTEEALTEWKEHTSG 121

Query: 180 NGKKYYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           NG+++YYN+ TK SSWEKP ELMTPIERADASTDW+E T
Sbjct: 122 NGRRFYYNKRTKQSSWEKPFELMTPIERADASTDWKEFT 160


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
           gi|223550756|gb|EEF52242.1| protein binding protein,
           putative [Ricinus communis]
          Length = 970

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/94 (50%), Positives = 61/94 (64%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQSSTAINDAIPKPETGEKVPSVWIEHTARNGKKY 194
           P  GQ W  +G+  +   TP Q TG+Q S + +         ++  S W EHTA +G++Y
Sbjct: 131 PAGGQHWLPSGSNGVAVATPVQPTGQQPSVSSSSDSVLNVPNQQSLSDWQEHTASDGRRY 190

Query: 195 YYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           YYN+ TK SSWEKPLELMTP+ERADAST W+E T
Sbjct: 191 YYNKRTKQSSWEKPLELMTPLERADASTVWKEFT 224


>gb|ESW32934.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
          Length = 1000

 Score =  100 bits (248), Expect = 3e-19
 Identities = 51/95 (53%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = +3

Query: 15  PVEGQPWASAGNQSITTFTPAQQTGEQSSTA-INDAIPKPETGEKVPSVWIEHTARNGKK 191
           P  GQPW S+ +QS+   T  Q  G QSS A + DA+    T +   S W EHT+ +G++
Sbjct: 150 PPGGQPWLSSASQSVAPSTSVQPAGLQSSGATLTDAVTNA-TNQHSLSDWQEHTSGDGRR 208

Query: 192 YYYNRITKVSSWEKPLELMTPIERADASTDWREHT 296
           YYYN+ T+ SSWEKPLELM+PIERADAST W+E T
Sbjct: 209 YYYNKRTRQSSWEKPLELMSPIERADASTVWKEFT 243