BLASTX nr result

ID: Catharanthus23_contig00035169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00035169
         (382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55351.1| PH01B019A14.20 [Phyllostachys edulis]                  56   4e-06

>emb|CCI55351.1| PH01B019A14.20 [Phyllostachys edulis]
          Length = 988

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 41/168 (24%)
 Frame = +2

Query: 2   KEKKPSAV*KDFEIVVVNGKKK-------ARCGYCHNLYVVAKTPTTISLLRHL------ 142
           K+K+ S   K F++V V  K K       A+C +C+ L    +   T  L+RH+      
Sbjct: 353 KQKQRSDCWKIFKVVTVPSKTKKGEIDTRAKCRFCYKLMSYKQGGATSHLMRHIPKCTPY 412

Query: 143 -----KIYVKRKLTMKAAEQQLTGL*CMSN----------------------PFTILEEE 241
                K+  +  L    A    TGL  ++                       PF ++E  
Sbjct: 413 QNKVAKMKAQTNLNFGPATAGDTGLPLIATPREYDQDETRRIISKMIIVHEYPFRMVEHT 472

Query: 242 GFNIIMKLGMPKWQKINKNTCKADCIKVYDIEKKKL-KNLEGVSKISL 382
            FN++M+     +Q I++ T +++CIK+YD E++ L K+L  VS ISL
Sbjct: 473 WFNVLMRYLNSSYQPISRKTIRSECIKIYDSEREVLRKSLRSVSHISL 520


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