BLASTX nr result
ID: Catharanthus23_contig00035135
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00035135
(269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccin... 124 1e-26
pir||S46947 ribosomal protein L2 - evening primrose mitochondrio... 124 1e-26
ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum] 123 3e-26
dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana ... 123 3e-26
ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriod... 120 2e-25
ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus] gi|... 117 2e-24
gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo] 115 6e-24
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209... 115 6e-24
ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705... 115 8e-24
gb|AFO69218.1| ribosomal protein L2 (mitochondrion) [Gossypium h... 113 2e-23
ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoeni... 113 3e-23
gb|AHA47111.1| ribosomal protein L2 (mitochondrion) [Amborella t... 111 1e-22
emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera] 110 2e-22
ref|XP_002333101.1| predicted protein [Populus trichocarpa] 108 6e-22
ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259... 108 1e-21
ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|32... 107 2e-21
gb|AEX57682.1| ribosomal protein L2 (mitochondrion) [Raphanus sa... 102 5e-20
ref|YP_006666008.1| ribosomal protein large subunit 2 (mitochond... 102 5e-20
ref|YP_004927575.1| rpl2 (mitochondrion) [Brassica carinata] gi|... 101 1e-19
ref|YP_717157.1| ribosomal protein L2 [Brassica napus] gi|375911... 100 3e-19
>ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccinium macrocarpon]
gi|549531664|gb|AGX28803.1| ribosomal protein L2
(mitochondrion) [Vaccinium macrocarpon]
Length = 335
Score = 124 bits (311), Expect = 1e-26
Identities = 61/71 (85%), Positives = 63/71 (88%), Gaps = 3/71 (4%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQGSL AKPIGEGTKDG CKVDRAPVTYIIASH+LEAGKMV+NCDW KPSTS
Sbjct: 265 NESKPKTDQGSLPAKPIGEGTKDGRCKVDRAPVTYIIASHELEAGKMVMNCDWSKPSTSD 324
Query: 89 LLRP---AHTY 66
LLRP AHTY
Sbjct: 325 LLRPAQNAHTY 335
>pir||S46947 ribosomal protein L2 - evening primrose mitochondrion
gi|516394|emb|CAA56451.1| 70s mitochondrial ribosomal
protein L2 [Oenothera berteroana]
Length = 332
Score = 124 bits (311), Expect = 1e-26
Identities = 61/71 (85%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQGSL AKPIGEGTKDG CKVDRAPVTYIIASHQLEAGKMV+NCDW KPSTS
Sbjct: 262 NESKPKTDQGSLPAKPIGEGTKDGACKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSD 321
Query: 89 LLRP---AHTY 66
LRP AHTY
Sbjct: 322 FLRPAQNAHTY 332
>ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]
Length = 331
Score = 123 bits (308), Expect = 3e-26
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQGSL AKPIGEG KDGTCKVDRAPVTYIIASHQLEAGKMV+NCDW KPSTS
Sbjct: 261 NESKPKTDQGSLPAKPIGEGLKDGTCKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSD 320
Query: 89 LLRPA 75
LLRPA
Sbjct: 321 LLRPA 325
>dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana tabacum]
Length = 331
Score = 123 bits (308), Expect = 3e-26
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQGSL AKPIGEG KDGTCKVDRAPVTYIIASHQLEAGKMV+NCDW KPSTS
Sbjct: 261 NESKPKTDQGSLPAKPIGEGLKDGTCKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSD 320
Query: 89 LLRPA 75
LLRPA
Sbjct: 321 LLRPA 325
>ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriodendron tulipifera]
gi|480541934|gb|AGJ90427.1| ribosomal protein L2
(mitochondrion) [Liriodendron tulipifera]
Length = 554
Score = 120 bits (301), Expect = 2e-25
Identities = 64/84 (76%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
Frame = -1
Query: 242 GSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSHLLRP---AH 72
GSL AKPIGEG KDG CKVDRAPVTYI+ASHQLEAGKMV+NCDW KPSTS LRP AH
Sbjct: 309 GSLPAKPIGEGPKDGACKVDRAPVTYILASHQLEAGKMVMNCDWSKPSTSGFLRPAQNAH 368
Query: 71 TY---*DLVHTAKKGRVEGRGQSA 9
TY DLV TA KGRVEG Q A
Sbjct: 369 TYLRFQDLVRTANKGRVEGGSQLA 392
>ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus]
gi|259156783|gb|ACV96645.1| ribosomal protein L2
[Citrullus lanatus]
Length = 332
Score = 117 bits (293), Expect = 2e-24
Identities = 57/71 (80%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKP+ DQGSL AKPIGEG KDG CKV+RAPVTY+IA HQLEAGKMV+NCDW KPSTS
Sbjct: 262 NESKPETDQGSLPAKPIGEGPKDGACKVNRAPVTYLIACHQLEAGKMVMNCDWSKPSTSD 321
Query: 89 LLRPA---HTY 66
LLRPA HTY
Sbjct: 322 LLRPAQNGHTY 332
>gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo]
Length = 354
Score = 115 bits (288), Expect = 6e-24
Identities = 56/83 (67%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Frame = -1
Query: 266 ESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSHL 87
ESK + DQGSL AKPIGEG KDG CKV+R PVTY IASH+ AGKMV+NCDW KPSTS L
Sbjct: 272 ESKAERDQGSLPAKPIGEGPKDGACKVNRVPVTYFIASHKCSAGKMVMNCDWSKPSTSDL 331
Query: 86 LRPA---HTY*DLVHTAKKGRVE 27
LRPA HTY DL+H ++ + E
Sbjct: 332 LRPAQNGHTYSDLIHITQRRKAE 354
>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
ribosomal protein L2 [Vitis vinifera]
gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
vinifera]
Length = 334
Score = 115 bits (288), Expect = 6e-24
Identities = 58/71 (81%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQG +KPIGEG KDG CKVDRAPVTYIIASHQLEAGKMV+NCDW KPSTS
Sbjct: 265 NESKPKTDQG-FYSKPIGEGPKDGACKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSD 323
Query: 89 LLRP---AHTY 66
LLRP AHTY
Sbjct: 324 LLRPARNAHTY 334
>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
ribosomal protein L2 (mitochondrion) [Carica papaya]
Length = 335
Score = 115 bits (287), Expect = 8e-24
Identities = 56/65 (86%), Positives = 57/65 (87%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQGSL AKPIGE KD CKVDRAPVTYIIASHQLEAGKMV+NCDW KPSTS
Sbjct: 265 NESKPKTDQGSLPAKPIGERPKDRACKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSD 324
Query: 89 LLRPA 75
LLRPA
Sbjct: 325 LLRPA 329
>gb|AFO69218.1| ribosomal protein L2 (mitochondrion) [Gossypium hirsutum]
Length = 334
Score = 113 bits (283), Expect = 2e-23
Identities = 55/65 (84%), Positives = 56/65 (86%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKPK DQGSL AKPIGE KD CKVDRAPVTYIIASHQLE GKMV+NCDW KPSTS
Sbjct: 264 NESKPKTDQGSLPAKPIGERPKDRACKVDRAPVTYIIASHQLETGKMVMNCDWSKPSTSD 323
Query: 89 LLRPA 75
LLRPA
Sbjct: 324 LLRPA 328
>ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoenix dactylifera]
gi|343478424|gb|AEM43912.1| ribosomal protein L2
(mitochondrion) [Phoenix dactylifera]
Length = 558
Score = 113 bits (282), Expect = 3e-23
Identities = 63/86 (73%), Positives = 65/86 (75%), Gaps = 8/86 (9%)
Frame = -1
Query: 242 GSLLAKPIGEGTKDGTCKVDRAPV--TYIIASHQLEAGKMVINCDWFKPSTSHLLRP--- 78
GSL AKPIGEG KDG CKVDRAPV TYI+ASHQLEAGKMV+NCDW KPS S LRP
Sbjct: 311 GSLPAKPIGEGPKDGACKVDRAPVVNTYILASHQLEAGKMVMNCDWSKPSKSGFLRPAQN 370
Query: 77 AHTY---*DLVHTAKKGRVEGRGQSA 9
AHTY DLV TA KGRVEG Q A
Sbjct: 371 AHTYLRFQDLVRTANKGRVEGGSQLA 396
>gb|AHA47111.1| ribosomal protein L2 (mitochondrion) [Amborella trichopoda]
Length = 632
Score = 111 bits (277), Expect = 1e-22
Identities = 60/84 (71%), Positives = 63/84 (75%), Gaps = 6/84 (7%)
Frame = -1
Query: 242 GSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSHLLRP---AH 72
GSL AKPIGEG KDG CKV RAPVTYI+ASHQLE GKMV+NCDW KPSTS LRP AH
Sbjct: 390 GSLPAKPIGEGPKDGACKVFRAPVTYILASHQLEVGKMVMNCDWSKPSTSGFLRPAQNAH 449
Query: 71 TY---*DLVHTAKKGRVEGRGQSA 9
TY DLV TA KGR G Q+A
Sbjct: 450 TYLRFKDLVRTANKGREGGSQQAA 473
>emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera]
Length = 336
Score = 110 bits (275), Expect = 2e-22
Identities = 58/73 (79%), Positives = 60/73 (82%), Gaps = 5/73 (6%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPV--TYIIASHQLEAGKMVINCDWFKPST 96
NESKPK DQG +KPIGEG KDG CKVDRAPV TYIIASHQLEAGKMV+NCDW KPST
Sbjct: 265 NESKPKTDQG-FYSKPIGEGPKDGACKVDRAPVVNTYIIASHQLEAGKMVMNCDWSKPST 323
Query: 95 SHLLRP---AHTY 66
S LLRP AHTY
Sbjct: 324 SDLLRPARNAHTY 336
>ref|XP_002333101.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 108 bits (271), Expect = 6e-22
Identities = 55/67 (82%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPV--TYIIASHQLEAGKMVINCDWFKPST 96
NESKPK DQGSL A PIGE KDG CKVDRAPV TYIIASHQLEAGKM+INCDW KPST
Sbjct: 265 NESKPKTDQGSLPANPIGEVPKDGACKVDRAPVVNTYIIASHQLEAGKMLINCDWSKPST 324
Query: 95 SHLLRPA 75
LLRPA
Sbjct: 325 RDLLRPA 331
>ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259156826|gb|ACV96687.1|
ribosomal protein L2 [Cucurbita pepo]
Length = 332
Score = 108 bits (269), Expect = 1e-21
Identities = 52/65 (80%), Positives = 56/65 (86%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSH 90
NESKP+ D SL AKPIGEG KDG CKV+RAPVTY+IASHQLEAGKMV+N DW KPSTS
Sbjct: 262 NESKPETDPASLPAKPIGEGPKDGACKVNRAPVTYLIASHQLEAGKMVMNYDWSKPSTSD 321
Query: 89 LLRPA 75
LLRPA
Sbjct: 322 LLRPA 326
>ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|325305597|gb|ADZ10766.1|
ribosomal protein L2 [Cucumis sativus]
Length = 341
Score = 107 bits (266), Expect = 2e-21
Identities = 52/70 (74%), Positives = 57/70 (81%), Gaps = 3/70 (4%)
Frame = -1
Query: 266 ESKPKMDQGSLLAKPIGEGTKDGTCKVDRAPVTYIIASHQLEAGKMVINCDWFKPSTSHL 87
ESK + DQGSL AKPIGEG KDG CKV+R PVTY+IASH+ AGKMV+NCDW KPSTS L
Sbjct: 272 ESKAERDQGSLPAKPIGEGPKDGACKVNRVPVTYLIASHKCSAGKMVMNCDWSKPSTSDL 331
Query: 86 LRPA---HTY 66
LRPA HTY
Sbjct: 332 LRPAQNGHTY 341
>gb|AEX57682.1| ribosomal protein L2 (mitochondrion) [Raphanus sativus]
Length = 349
Score = 102 bits (254), Expect = 5e-20
Identities = 53/76 (69%), Positives = 56/76 (73%), Gaps = 11/76 (14%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTK-----------DGTCKVDRAPVTYIIASHQLEAGKMVI 123
N+SKPK DQGSL AKPIGE K DG CKVDRAPVTYIIASHQLEAGKMV+
Sbjct: 263 NKSKPKTDQGSLPAKPIGERAKQLKALRGLRAKDGACKVDRAPVTYIIASHQLEAGKMVM 322
Query: 122 NCDWFKPSTSHLLRPA 75
NCDW KPSTS L+ A
Sbjct: 323 NCDWSKPSTSSFLQSA 338
>ref|YP_006666008.1| ribosomal protein large subunit 2 (mitochondrion) [Raphanus
sativus] gi|400278283|dbj|BAM36207.1| ribosomal protein
large subunit 2 (mitochondrion) [Raphanus sativus]
gi|400278329|dbj|BAM36252.1| ribosomal protein large
subunit 2 (mitochondrion) [Raphanus sativus]
gi|443298136|gb|AGC81680.1| ribosomal protein L2
(mitochondrion) [Raphanus sativus]
Length = 349
Score = 102 bits (254), Expect = 5e-20
Identities = 53/76 (69%), Positives = 56/76 (73%), Gaps = 11/76 (14%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTK-----------DGTCKVDRAPVTYIIASHQLEAGKMVI 123
N+SKPK DQGSL AKPIGE K DG CKVDRAPVTYIIASHQLEAGKMV+
Sbjct: 263 NKSKPKTDQGSLPAKPIGERAKQLKALRGLRAKDGACKVDRAPVTYIIASHQLEAGKMVM 322
Query: 122 NCDWFKPSTSHLLRPA 75
NCDW KPSTS L+ A
Sbjct: 323 NCDWSKPSTSSFLQSA 338
>ref|YP_004927575.1| rpl2 (mitochondrion) [Brassica carinata]
gi|335355036|gb|AEH43590.1| rpl2 [Brassica carinata]
Length = 349
Score = 101 bits (251), Expect = 1e-19
Identities = 52/74 (70%), Positives = 55/74 (74%), Gaps = 11/74 (14%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTK-----------DGTCKVDRAPVTYIIASHQLEAGKMVI 123
N+SKPK DQGSL AKPIGE K DG CKVDRAPVTYIIASHQLEAGKMV+
Sbjct: 263 NKSKPKTDQGSLPAKPIGETAKQLKALRGLRAKDGACKVDRAPVTYIIASHQLEAGKMVM 322
Query: 122 NCDWFKPSTSHLLR 81
NCDW KPSTS L+
Sbjct: 323 NCDWSKPSTSSFLQ 336
>ref|YP_717157.1| ribosomal protein L2 [Brassica napus] gi|37591104|dbj|BAC98906.1|
ribosomal protein L2 [Brassica napus]
Length = 349
Score = 100 bits (248), Expect = 3e-19
Identities = 52/76 (68%), Positives = 55/76 (72%), Gaps = 11/76 (14%)
Frame = -1
Query: 269 NESKPKMDQGSLLAKPIGEGTK-----------DGTCKVDRAPVTYIIASHQLEAGKMVI 123
N+SKPK DQGSL AKPIGE K DG CKVDRAPVTYIIASHQLEAGKMV+
Sbjct: 263 NKSKPKTDQGSLPAKPIGERAKQLKALRGLRAKDGACKVDRAPVTYIIASHQLEAGKMVM 322
Query: 122 NCDWFKPSTSHLLRPA 75
NCDW KPSTS + A
Sbjct: 323 NCDWSKPSTSSFSQSA 338