BLASTX nr result
ID: Catharanthus23_contig00035013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00035013
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003602518.1| Splicing factor-like protein [Medicago trunc... 77 2e-12
ref|XP_003602517.1| Splicing factor-like protein [Medicago trunc... 77 2e-12
gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis] 73 3e-11
ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isofo... 73 3e-11
gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus... 73 3e-11
gb|EOX97616.1| Splicing factor isoform 4 [Theobroma cacao] 73 3e-11
gb|EOX97615.1| Splicing factor isoform 3 [Theobroma cacao] 73 3e-11
gb|EOX97613.1| Splicing factor isoform 1 [Theobroma cacao] gi|50... 73 3e-11
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc... 73 3e-11
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isofo... 73 3e-11
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 73 3e-11
gb|ACJ85781.1| unknown [Medicago truncatula] 73 3e-11
ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isofo... 73 5e-11
ref|XP_006486688.1| PREDICTED: RNA-binding protein 39-like isofo... 73 5e-11
ref|XP_006486687.1| PREDICTED: RNA-binding protein 39-like isofo... 73 5e-11
ref|XP_006486686.1| PREDICTED: RNA-binding protein 39-like isofo... 73 5e-11
ref|XP_006486685.1| PREDICTED: RNA-binding protein 39-like isofo... 73 5e-11
ref|XP_006427900.1| hypothetical protein CICLE_v10025229mg [Citr... 73 5e-11
ref|XP_006422532.1| hypothetical protein CICLE_v10027985mg [Citr... 73 5e-11
ref|XP_006422531.1| hypothetical protein CICLE_v10027985mg [Citr... 73 5e-11
>ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein
[Medicago truncatula]
Length = 766
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 IFLVYSFFTALKLQRRKFLFIFW-VIFLLT*QFLRYIEFYDVMSVPVAIALSGQSLLGQP 225
IF +T ++L +FLF + ++ ++ RYIEFYD MSVP+AIALSGQ LLGQP
Sbjct: 369 IFKYTKRYTLVELSALEFLFPYISLLCFVSFDCCRYIEFYDAMSVPMAIALSGQLLLGQP 428
Query: 226 VMVKPSEAEKNLV 264
VMVKPSEAEKNLV
Sbjct: 429 VMVKPSEAEKNLV 441
>ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein
[Medicago truncatula]
Length = 731
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 IFLVYSFFTALKLQRRKFLFIFW-VIFLLT*QFLRYIEFYDVMSVPVAIALSGQSLLGQP 225
IF +T ++L +FLF + ++ ++ RYIEFYD MSVP+AIALSGQ LLGQP
Sbjct: 369 IFKYTKRYTLVELSALEFLFPYISLLCFVSFDCCRYIEFYDAMSVPMAIALSGQLLLGQP 428
Query: 226 VMVKPSEAEKNLV 264
VMVKPSEAEKNLV
Sbjct: 429 VMVKPSEAEKNLV 441
>gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis]
Length = 811
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 150 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 187
>ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Glycine max]
Length = 421
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 92 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 129
>gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus vulgaris]
Length = 603
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 264 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 301
>gb|EOX97616.1| Splicing factor isoform 4 [Theobroma cacao]
Length = 452
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 108 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 145
>gb|EOX97615.1| Splicing factor isoform 3 [Theobroma cacao]
Length = 545
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 237 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 274
>gb|EOX97613.1| Splicing factor isoform 1 [Theobroma cacao]
gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
[Theobroma cacao]
Length = 581
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 237 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 274
>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 271 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 308
>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Glycine max]
Length = 597
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 268 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 305
>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative
[Ricinus communis]
Length = 609
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 271 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 308
>gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 13 YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 50
>ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isoform X5 [Citrus sinensis]
Length = 639
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 331
>ref|XP_006486688.1| PREDICTED: RNA-binding protein 39-like isoform X4 [Citrus sinensis]
Length = 647
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 302 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 339
>ref|XP_006486687.1| PREDICTED: RNA-binding protein 39-like isoform X3 [Citrus sinensis]
Length = 658
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 313 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 350
>ref|XP_006486686.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Citrus sinensis]
Length = 661
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 316 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 353
>ref|XP_006486685.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Citrus sinensis]
Length = 669
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 324 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 361
>ref|XP_006427900.1| hypothetical protein CICLE_v10025229mg [Citrus clementina]
gi|568820031|ref|XP_006464535.1| PREDICTED: RNA-binding
protein 39-like [Citrus sinensis]
gi|557529890|gb|ESR41140.1| hypothetical protein
CICLE_v10025229mg [Citrus clementina]
Length = 589
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
YIEFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 264 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV 301
>ref|XP_006422532.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
gi|557524466|gb|ESR35772.1| hypothetical protein
CICLE_v10027985mg [Citrus clementina]
Length = 639
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 331
>ref|XP_006422531.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
gi|557524465|gb|ESR35771.1| hypothetical protein
CICLE_v10027985mg [Citrus clementina]
Length = 647
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 151 YIEFYDVMSVPVAIALSGQSLLGQPVMVKPSEAEKNLV 264
Y+EFYDVMSVP+AIALSGQ LLGQPVMVKPSEAEKNLV
Sbjct: 302 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 339