BLASTX nr result

ID: Catharanthus23_contig00034852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00034852
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008081321.1| NADH dehydrogenase subunit 1 (chloroplast) [...   134   2e-29
gb|AGW04643.1| NADH dehydrogenase subunit 1 [Marsdenia astephano...   127   1e-27
ref|YP_008578594.1| NADH dehydrogenase subunit 1 (chloroplast) [...   127   2e-27
gb|AGW05028.1| NADH dehydrogenase subunit 1 [Vincetoxicum rossicum]   127   2e-27
gb|AGW04494.1| NADH dehydrogenase subunit 1 [Astephanus triflorus]    127   2e-27
gb|AER53198.1| NADH dehydrogenase subunit 1 [Asclepias subaphyll...   127   2e-27
gb|AER52957.1| NADH dehydrogenase subunit 1 [Asclepias macrotis]...   127   2e-27
gb|AER52876.1| NADH dehydrogenase subunit 1 [Asclepias leptopus]      127   2e-27
gb|AER52631.1| NADH dehydrogenase subunit 1 [Asclepias coulteri]      127   2e-27
ref|YP_008578677.1| NADH dehydrogenase subunit 1 (chloroplast) [...   127   2e-27
gb|AGW04874.1| NADH dehydrogenase subunit 1 [Sisyranthus trichos...   126   3e-27
gb|AGW04797.1| NADH dehydrogenase subunit 1 [Orthosia scoparia]       124   1e-26
gb|AER52713.1| NADH dehydrogenase subunit 1 [Asclepias cutleri] ...   124   1e-26
gb|AGW04417.1| NADH dehydrogenase subunit 1 [Araujia sericifera]      124   1e-26
gb|ADD31433.1| NADH-plastoquinone oxidoreductase subunit 1 prote...   122   5e-26
gb|AER52467.1| NADH dehydrogenase subunit 1 [Asclepias albicans]...   121   9e-26
gb|ADD31438.1| NADH-plastoquinone oxidoreductase subunit 1 prote...   121   9e-26
ref|YP_001837410.1| NADH dehydrogenase subunit 1 [Guizotia abyss...   120   1e-25
ref|YP_004564422.1| NADH-plastoquinone oxidoreductase subunit 1 ...   119   4e-25
gb|ADD31431.1| NADH-plastoquinone oxidoreductase subunit 1 prote...   119   4e-25

>ref|YP_008081321.1| NADH dehydrogenase subunit 1 (chloroplast) [Catharanthus roseus]
           gi|474452132|gb|AGI51200.1| NADH dehydrogenase subunit 1
           (chloroplast) [Catharanthus roseus]
          Length = 365

 Score =  134 bits (336), Expect = 2e-29
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = -2

Query: 291 LVPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFL 112
           LVPEIFDINITKV KVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFL
Sbjct: 287 LVPEIFDINITKVDKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFL 346

Query: 111 LPISLGN 91
           LPISLGN
Sbjct: 347 LPISLGN 353


>gb|AGW04643.1| NADH dehydrogenase subunit 1 [Marsdenia astephanoides]
          Length = 365

 Score =  127 bits (320), Expect = 1e-27
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = -2

Query: 285 PEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLLP 106
           P+IFDINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLLP
Sbjct: 289 PKIFDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLLP 348

Query: 105 ISLGN 91
           ISLGN
Sbjct: 349 ISLGN 353


>ref|YP_008578594.1| NADH dehydrogenase subunit 1 (chloroplast) [Asclepias nivea]
           gi|544187108|gb|AGW05046.1| NADH dehydrogenase subunit 1
           (chloroplast) [Asclepias nivea]
          Length = 365

 Score =  127 bits (319), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPQILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AGW05028.1| NADH dehydrogenase subunit 1 [Vincetoxicum rossicum]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AGW04494.1| NADH dehydrogenase subunit 1 [Astephanus triflorus]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AER53198.1| NADH dehydrogenase subunit 1 [Asclepias subaphylla]
           gi|355332763|gb|AER53440.1| NADH dehydrogenase subunit 1
           [Asclepias subulata]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AER52957.1| NADH dehydrogenase subunit 1 [Asclepias macrotis]
           gi|355332353|gb|AER53035.1| NADH dehydrogenase subunit 1
           [Asclepias macrotis]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AER52876.1| NADH dehydrogenase subunit 1 [Asclepias leptopus]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AER52631.1| NADH dehydrogenase subunit 1 [Asclepias coulteri]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>ref|YP_008578677.1| NADH dehydrogenase subunit 1 (chloroplast) [Asclepias syriaca]
           gi|326200334|gb|ADZ52373.1| NADH dehydrogenase subunit 1
           [Asclepias syriaca] gi|544187263|gb|AGW05191.1| NADH
           dehydrogenase subunit 1 (chloroplast) [Asclepias
           syriaca]
          Length = 365

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AGW04874.1| NADH dehydrogenase subunit 1 [Sisyranthus trichostomus]
          Length = 365

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+IFDINI KVGKVFGTI+SIFITLAKTYLFLFI IATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKIFDININKVGKVFGTIISIFITLAKTYLFLFIAIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AGW04797.1| NADH dehydrogenase subunit 1 [Orthosia scoparia]
          Length = 365

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/66 (90%), Positives = 63/66 (95%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KV KVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVSKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AER52713.1| NADH dehydrogenase subunit 1 [Asclepias cutleri]
           gi|355332110|gb|AER52795.1| NADH dehydrogenase subunit 1
           [Asclepias cutleri]
          Length = 365

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/66 (90%), Positives = 63/66 (95%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KV KVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPKILDININKVSKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|AGW04417.1| NADH dehydrogenase subunit 1 [Araujia sericifera]
          Length = 365

 Score =  124 bits (311), Expect = 1e-26
 Identities = 60/66 (90%), Positives = 63/66 (95%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+I DINI KVGKVF TI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPQILDININKVGKVFETIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 347

Query: 108 PISLGN 91
           PISLGN
Sbjct: 348 PISLGN 353


>gb|ADD31433.1| NADH-plastoquinone oxidoreductase subunit 1 protein [Ehretia
           acuminata]
          Length = 363

 Score =  122 bits (306), Expect = 5e-26
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = -2

Query: 291 LVPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFL 112
           LVPE+FDIN  K GKVFGTI+ IFITL+KTYLFLFIPIATRWTLPRLRMDQLLNLGWKFL
Sbjct: 287 LVPELFDIN--KAGKVFGTIIGIFITLSKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFL 344

Query: 111 LPISLGN 91
           LPISLGN
Sbjct: 345 LPISLGN 351


>gb|AER52467.1| NADH dehydrogenase subunit 1 [Asclepias albicans]
           gi|355331861|gb|AER52549.1| NADH dehydrogenase subunit 1
           [Asclepias albicans] gi|355332435|gb|AER53116.1| NADH
           dehydrogenase subunit 1 [Asclepias masonii]
           gi|355332597|gb|AER53276.1| NADH dehydrogenase subunit 1
           [Asclepias subaphylla] gi|355332680|gb|AER53358.1| NADH
           dehydrogenase subunit 1 [Asclepias subulata]
           gi|355332844|gb|AER53520.1| NADH dehydrogenase subunit 1
           [Asclepias albicans x Asclepias subulata]
          Length = 368

 Score =  121 bits (304), Expect = 9e-26
 Identities = 61/69 (88%), Positives = 64/69 (92%), Gaps = 3/69 (4%)
 Frame = -2

Query: 288 VPEIFDINIT---KVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWK 118
           VP+I DINI    KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWK
Sbjct: 288 VPKILDININNINKVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWK 347

Query: 117 FLLPISLGN 91
           FLLPISLGN
Sbjct: 348 FLLPISLGN 356


>gb|ADD31438.1| NADH-plastoquinone oxidoreductase subunit 1 protein [Nerium
           oleander]
          Length = 363

 Score =  121 bits (304), Expect = 9e-26
 Identities = 60/66 (90%), Positives = 63/66 (95%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VP+ FDIN  KVGKVFGTI+SIFITLAKTYLFLFIPIATRWTLPRLR+DQLLNLGWKFLL
Sbjct: 288 VPQFFDIN--KVGKVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRIDQLLNLGWKFLL 345

Query: 108 PISLGN 91
           PISLGN
Sbjct: 346 PISLGN 351


>ref|YP_001837410.1| NADH dehydrogenase subunit 1 [Guizotia abyssinica]
           gi|179366305|gb|ACB86576.1| NADH-plastoquinone
           oxidoreductase subunit 1 [Guizotia abyssinica]
          Length = 363

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/66 (90%), Positives = 63/66 (95%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VPE+FDI  TK G+VFGTI+SIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL
Sbjct: 288 VPELFDI--TKRGRVFGTIISIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 345

Query: 108 PISLGN 91
           PISLGN
Sbjct: 346 PISLGN 351


>ref|YP_004564422.1| NADH-plastoquinone oxidoreductase subunit 1 (chloroplast)
           [Ageratina adenophora] gi|334089725|gb|AEG64608.1|
           NADH-plastoquinone oxidoreductase subunit 1
           (chloroplast) [Ageratina adenophora]
          Length = 363

 Score =  119 bits (298), Expect = 4e-25
 Identities = 59/66 (89%), Positives = 62/66 (93%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VPE+FDI  TK G+VFGTI+ IFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL
Sbjct: 288 VPELFDI--TKRGRVFGTIMGIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 345

Query: 108 PISLGN 91
           PISLGN
Sbjct: 346 PISLGN 351


>gb|ADD31431.1| NADH-plastoquinone oxidoreductase subunit 1 protein [Aucuba
           japonica]
          Length = 363

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/66 (87%), Positives = 61/66 (92%)
 Frame = -2

Query: 288 VPEIFDINITKVGKVFGTILSIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLL 109
           VPE+FDIN  K G+VFGTI+ IFITLAKTYLFLFIPI TRWTLPRLRMDQLLNLGWKFLL
Sbjct: 288 VPELFDIN--KTGRVFGTIIGIFITLAKTYLFLFIPITTRWTLPRLRMDQLLNLGWKFLL 345

Query: 108 PISLGN 91
           PISLGN
Sbjct: 346 PISLGN 351


Top