BLASTX nr result
ID: Catharanthus23_contig00034712
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00034712
(271 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006474560.1| PREDICTED: DNA repair protein RAD51 homolog ... 109 3e-22
ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ... 107 2e-21
ref|XP_002326313.1| predicted protein [Populus trichocarpa] gi|5... 106 3e-21
dbj|BAF02935.1| RAD51 homolog [Populus nigra] 106 3e-21
ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly... 106 4e-21
gb|AFK39468.1| unknown [Medicago truncatula] 105 5e-21
ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medic... 105 5e-21
ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog ... 103 2e-20
ref|XP_006828625.1| hypothetical protein AMTR_s00129p00082230 [A... 103 2e-20
ref|NP_001104919.1| DNA repair protein RAD51 homolog B [Zea mays... 103 3e-20
ref|XP_002443207.1| hypothetical protein SORBIDRAFT_08g015360 [S... 103 3e-20
gb|EMJ03544.1| hypothetical protein PRUPE_ppa008236mg [Prunus pe... 102 4e-20
ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus ... 102 4e-20
gb|EMT30060.1| DNA repair RAD51-B-like protein [Aegilops tauschii] 102 7e-20
gb|ACH42252.1| RAD51A recombination protein [Triticum aestivum] ... 102 7e-20
ref|NP_001066806.1| Os12g0497300 [Oryza sativa Japonica Group] g... 101 9e-20
gb|EEE53249.1| hypothetical protein OsJ_36165 [Oryza sativa Japo... 101 9e-20
gb|EAY83196.1| hypothetical protein OsI_38408 [Oryza sativa Indi... 101 9e-20
gb|EXC13609.1| DNA repair protein RAD51-like protein [Morus nota... 101 1e-19
ref|XP_004508049.1| PREDICTED: DNA repair protein RAD51 homolog ... 101 1e-19
>ref|XP_006474560.1| PREDICTED: DNA repair protein RAD51 homolog [Citrus sinensis]
Length = 342
Score = 109 bits (273), Expect = 3e-22
Identities = 59/75 (78%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = -2
Query: 222 MEQQRNHK-MAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPR 46
MEQQRN K + QHGPFPVEQLQASGIAALD+KKLKDAGLCTVE+VAYSPR
Sbjct: 1 MEQQRNQKTVQQQQQEELEEIQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPR 60
Query: 45 KELLQIKGISEAKVD 1
KELLQIKGISEAKVD
Sbjct: 61 KELLQIKGISEAKVD 75
>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
protein RAD51 homolog [Cucumis sativus]
Length = 340
Score = 107 bits (267), Expect = 2e-21
Identities = 56/74 (75%), Positives = 61/74 (82%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRK 43
ME+QRN K + HGPFPVEQLQASGIAA+D+KKLKDAGLCTVE+VAYSPRK
Sbjct: 1 MERQRNQKPSEEQEEADEIQ-HGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRK 59
Query: 42 ELLQIKGISEAKVD 1
ELLQIKGISEAKVD
Sbjct: 60 ELLQIKGISEAKVD 73
>ref|XP_002326313.1| predicted protein [Populus trichocarpa]
gi|566176241|ref|XP_006381549.1| hypothetical protein
POPTR_0006s13750g [Populus trichocarpa]
gi|550336254|gb|ERP59346.1| hypothetical protein
POPTR_0006s13750g [Populus trichocarpa]
Length = 348
Score = 106 bits (265), Expect = 3e-21
Identities = 56/75 (74%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQ-HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPR 46
MEQQRN K HGPFPVEQLQASGIA+LD+KKLKDAGLCTVE+VA+SPR
Sbjct: 1 MEQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPR 60
Query: 45 KELLQIKGISEAKVD 1
KELLQIKGISEAKVD
Sbjct: 61 KELLQIKGISEAKVD 75
>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
Length = 342
Score = 106 bits (265), Expect = 3e-21
Identities = 56/75 (74%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQ-HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPR 46
MEQQRN K HGPFPVEQLQASGIA+LD+KKLKDAGLCTVE+VA+SPR
Sbjct: 1 MEQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPR 60
Query: 45 KELLQIKGISEAKVD 1
KELLQIKGISEAKVD
Sbjct: 61 KELLQIKGISEAKVD 75
>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
LeRAD51 [Solanum lycopersicum]
Length = 342
Score = 106 bits (264), Expect = 4e-21
Identities = 57/75 (76%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = -2
Query: 222 MEQQ-RNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPR 46
MEQQ RN K QHGPFPVEQLQASGIAALD+KKLKDAGLCTVE+V Y+PR
Sbjct: 1 MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR 60
Query: 45 KELLQIKGISEAKVD 1
KELLQIKGISEAKVD
Sbjct: 61 KELLQIKGISEAKVD 75
>gb|AFK39468.1| unknown [Medicago truncatula]
Length = 161
Score = 105 bits (263), Expect = 5e-21
Identities = 55/74 (74%), Positives = 60/74 (81%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRK 43
MEQQR K A QHGP PVEQLQASGIAALDIKKLKDAG+CTVE+VAY+PRK
Sbjct: 1 MEQQRLEKTAQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPRK 60
Query: 42 ELLQIKGISEAKVD 1
+LLQIKGIS+AKVD
Sbjct: 61 DLLQIKGISDAKVD 74
>ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355510992|gb|AES92134.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 341
Score = 105 bits (263), Expect = 5e-21
Identities = 55/74 (74%), Positives = 60/74 (81%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRK 43
MEQQR K A QHGP PVEQLQASGIAALDIKKLKDAG+CTVE+VAY+PRK
Sbjct: 1 MEQQRLEKTAQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPRK 60
Query: 42 ELLQIKGISEAKVD 1
+LLQIKGIS+AKVD
Sbjct: 61 DLLQIKGISDAKVD 74
>ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Glycine max]
Length = 344
Score = 103 bits (258), Expect = 2e-20
Identities = 56/77 (72%), Positives = 62/77 (80%)
Frame = -2
Query: 231 SATMEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYS 52
SATMEQQR H+ A Q GP PVEQLQASGIAA D+KKLKDAG+CTVE+VAY+
Sbjct: 2 SATMEQQR-HQKAPQQQDEAEEIQPGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYT 60
Query: 51 PRKELLQIKGISEAKVD 1
PRK+LLQIKGISEAKVD
Sbjct: 61 PRKDLLQIKGISEAKVD 77
>ref|XP_006828625.1| hypothetical protein AMTR_s00129p00082230 [Amborella trichopoda]
gi|548833415|gb|ERM96041.1| hypothetical protein
AMTR_s00129p00082230 [Amborella trichopoda]
Length = 343
Score = 103 bits (257), Expect = 2e-20
Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
Frame = -2
Query: 222 MEQ--QRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSP 49
MEQ Q+ K A QHGPFP+EQLQASGIA+LD+KKLKDAGLCTVE+VAYSP
Sbjct: 1 MEQMHQKQQKFAEQQADETEDMQHGPFPIEQLQASGIASLDVKKLKDAGLCTVESVAYSP 60
Query: 48 RKELLQIKGISEAKVD 1
RK+LLQIKGIS+AKVD
Sbjct: 61 RKDLLQIKGISDAKVD 76
>ref|NP_001104919.1| DNA repair protein RAD51 homolog B [Zea mays]
gi|55976630|sp|Q9XED7.1|R51A2_MAIZE RecName: Full=DNA
repair protein RAD51 homolog B; AltName: Full=Rad51-like
protein B; Short=RAD51B; AltName: Full=ZmRAD51b
gi|4886754|gb|AAD32030.1|AF079429_1 RAD51 homolog RAD51B
[Zea mays] gi|223945143|gb|ACN26655.1| unknown [Zea
mays] gi|414878278|tpg|DAA55409.1| TPA: DNA repair
protein RAD51-like protein B [Zea mays]
Length = 340
Score = 103 bits (256), Expect = 3e-20
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAALD+KKLKDAGLCTVE+VAYSPRK+LLQIKGISEAKVD
Sbjct: 21 HGPFPIEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEAKVD 73
>ref|XP_002443207.1| hypothetical protein SORBIDRAFT_08g015360 [Sorghum bicolor]
gi|241943900|gb|EES17045.1| hypothetical protein
SORBIDRAFT_08g015360 [Sorghum bicolor]
Length = 342
Score = 103 bits (256), Expect = 3e-20
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAALD+KKLKDAGLCTVE+VAYSPRK+LLQIKGISEAKVD
Sbjct: 23 HGPFPIEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEAKVD 75
>gb|EMJ03544.1| hypothetical protein PRUPE_ppa008236mg [Prunus persica]
Length = 340
Score = 102 bits (255), Expect = 4e-20
Identities = 54/74 (72%), Positives = 58/74 (78%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRK 43
MEQQ N K A HGP PVEQLQ SGIA++D+KKLKDAGLCTVEAVAYSPRK
Sbjct: 1 MEQQSNQKTAQQQDEHEEMQ-HGPVPVEQLQTSGIASIDVKKLKDAGLCTVEAVAYSPRK 59
Query: 42 ELLQIKGISEAKVD 1
+LLQIKGISEAKVD
Sbjct: 60 DLLQIKGISEAKVD 73
>ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus communis]
gi|223544683|gb|EEF46199.1| DNA repair protein rad51,
putative [Ricinus communis]
Length = 294
Score = 102 bits (255), Expect = 4e-20
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFPVEQLQ SGIAALD+KKLKDAGLCTVE+VAYSPRKELLQIKGISEAKVD
Sbjct: 22 HGPFPVEQLQESGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVD 74
>gb|EMT30060.1| DNA repair RAD51-B-like protein [Aegilops tauschii]
Length = 369
Score = 102 bits (253), Expect = 7e-20
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAA+D+KKLKDAGLCTVE+VAYSPRK+LLQIKGISEAKVD
Sbjct: 23 HGPFPIEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEAKVD 75
>gb|ACH42252.1| RAD51A recombination protein [Triticum aestivum]
gi|222154121|gb|ACM47240.1| RAD51 recombination protein
[Triticum aestivum]
Length = 342
Score = 102 bits (253), Expect = 7e-20
Identities = 48/53 (90%), Positives = 53/53 (100%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAA+D+KKLKDAGLCTVE+VAYSPRK+LLQIKGISEAKVD
Sbjct: 23 HGPFPIEQLQASGIAAVDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEAKVD 75
>ref|NP_001066806.1| Os12g0497300 [Oryza sativa Japonica Group]
gi|18874073|dbj|BAB85492.1| Rad51 [Oryza sativa Japonica
Group] gi|18874075|dbj|BAB85493.1| Rad51 [Oryza sativa
Japonica Group] gi|108862704|gb|ABA98592.2| DNA repair
protein RAD51, putative, expressed [Oryza sativa
Japonica Group] gi|113649313|dbj|BAF29825.1|
Os12g0497300 [Oryza sativa Japonica Group]
Length = 341
Score = 101 bits (252), Expect = 9e-20
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAALD+KKLKDAGLCTVE+V YSPRK+LLQIKGISEAKVD
Sbjct: 23 HGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPRKDLLQIKGISEAKVD 75
>gb|EEE53249.1| hypothetical protein OsJ_36165 [Oryza sativa Japonica Group]
Length = 292
Score = 101 bits (252), Expect = 9e-20
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAALD+KKLKDAGLCTVE+V YSPRK+LLQIKGISEAKVD
Sbjct: 23 HGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPRKDLLQIKGISEAKVD 75
>gb|EAY83196.1| hypothetical protein OsI_38408 [Oryza sativa Indica Group]
Length = 294
Score = 101 bits (252), Expect = 9e-20
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2
Query: 159 HGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRKELLQIKGISEAKVD 1
HGPFP+EQLQASGIAALD+KKLKDAGLCTVE+V YSPRK+LLQIKGISEAKVD
Sbjct: 23 HGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPRKDLLQIKGISEAKVD 75
>gb|EXC13609.1| DNA repair protein RAD51-like protein [Morus notabilis]
Length = 364
Score = 101 bits (251), Expect = 1e-19
Identities = 53/74 (71%), Positives = 58/74 (78%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRK 43
MEQQRN K HGP PVEQLQASGIA++D+KKLKDAGLCTVE+VAYSPRK
Sbjct: 3 MEQQRNQKEVQEHEELEEAQ-HGPSPVEQLQASGIASIDVKKLKDAGLCTVESVAYSPRK 61
Query: 42 ELLQIKGISEAKVD 1
+LL IKGISEAKVD
Sbjct: 62 DLLHIKGISEAKVD 75
>ref|XP_004508049.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Cicer
arietinum]
Length = 340
Score = 101 bits (251), Expect = 1e-19
Identities = 52/74 (70%), Positives = 59/74 (79%)
Frame = -2
Query: 222 MEQQRNHKMAXXXXXXXXXXQHGPFPVEQLQASGIAALDIKKLKDAGLCTVEAVAYSPRK 43
MEQQR K A HGP P+EQLQASGIAA+D+KKLKDAG+CTVE+VAY+PRK
Sbjct: 1 MEQQRLEKTAQQQDETEEIQ-HGPLPIEQLQASGIAAIDVKKLKDAGICTVESVAYTPRK 59
Query: 42 ELLQIKGISEAKVD 1
+LLQIKGISEAKVD
Sbjct: 60 DLLQIKGISEAKVD 73