BLASTX nr result
ID: Catharanthus23_contig00034577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00034577
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006449889.1| hypothetical protein CICLE_v10017607mg [Citr... 140 1e-31
ref|XP_006468176.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
ref|XP_006373596.1| hypothetical protein POPTR_0016s01140g [Popu... 136 3e-30
gb|EOY28918.1| Tetratricopeptide repeat-like superfamily protein... 131 8e-29
ref|XP_004295318.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
gb|EMJ13925.1| hypothetical protein PRUPE_ppa018986mg, partial [... 129 4e-28
gb|EPS71808.1| hypothetical protein M569_02948, partial [Genlise... 128 7e-28
gb|EXB56658.1| Pentatricopeptide repeat-containing protein [Moru... 125 4e-27
ref|XP_003594259.1| Thymidine kinase [Medicago truncatula] gi|35... 125 8e-27
emb|CBI38481.3| unnamed protein product [Vitis vinifera] 124 1e-26
ref|XP_004486547.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 124 1e-26
ref|XP_006283557.1| hypothetical protein CARUB_v10004611mg [Caps... 118 7e-25
ref|XP_006414596.1| hypothetical protein EUTSA_v10027271mg [Eutr... 117 2e-24
ref|XP_006414593.1| hypothetical protein EUTSA_v10026841mg [Eutr... 117 2e-24
ref|XP_006414591.1| hypothetical protein EUTSA_v10027220mg [Eutr... 117 2e-24
ref|NP_193380.3| pentatricopeptide (PPR) repeat-containing prote... 115 5e-24
ref|XP_006283558.1| hypothetical protein CARUB_v10004611mg [Caps... 114 1e-23
ref|XP_006414344.1| hypothetical protein EUTSA_v10025426mg [Eutr... 113 2e-23
ref|XP_002520501.1| pentatricopeptide repeat-containing protein,... 112 4e-23
>ref|XP_006449889.1| hypothetical protein CICLE_v10017607mg [Citrus clementina]
gi|557552500|gb|ESR63129.1| hypothetical protein
CICLE_v10017607mg [Citrus clementina]
Length = 649
Score = 140 bits (354), Expect = 1e-31
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIF K+YRKG+RIH QMVIVG+VP E++ KLLILYAK GDL TA LFDKL
Sbjct: 100 YALLLQECIFTKEYRKGRRIHAQMVIVGYVPIEYIKTKLLILYAKYGDLVTAHVLFDKLQ 159
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K L+SWNAMIAGYVQKGFE+VGL +Y++MR
Sbjct: 160 QKSLISWNAMIAGYVQKGFEEVGLDYYYKMR 190
>ref|XP_006468176.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Citrus sinensis]
Length = 431
Score = 140 bits (352), Expect = 2e-31
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIF K+YRKG+RIH QMVIVG+VPNE++ KLLILYAK GDL TA LFDK
Sbjct: 49 YALLLQECIFTKEYRKGRRIHAQMVIVGYVPNEYIKTKLLILYAKYGDLVTAHVLFDKPQ 108
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K L+SWNA+IAGYVQKGFE+VGL +Y++MR
Sbjct: 109 QKSLISWNAIIAGYVQKGFEEVGLDYYYKMR 139
>ref|XP_006373596.1| hypothetical protein POPTR_0016s01140g [Populus trichocarpa]
gi|550320530|gb|ERP51393.1| hypothetical protein
POPTR_0016s01140g [Populus trichocarpa]
Length = 509
Score = 136 bits (342), Expect = 3e-30
Identities = 63/91 (69%), Positives = 77/91 (84%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIF+K Y KGKRIH QMV+VG+VPNE++ KL+ILYAK+GDL T LFD L
Sbjct: 123 YALLLQECIFKKLYNKGKRIHAQMVVVGYVPNEYLKTKLMILYAKSGDLKTMHLLFDMLM 182
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K L+SWNA+IAGYVQKG E++GLSFY+EMR
Sbjct: 183 EKSLISWNALIAGYVQKGLEEMGLSFYYEMR 213
>gb|EOY28918.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 545
Score = 131 bits (330), Expect = 8e-29
Identities = 61/91 (67%), Positives = 76/91 (83%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIFRK+Y+ G+RIH QMV+VG+VPNE++ +KLLILYAK GDL TA LFDKL
Sbjct: 159 YALLLQECIFRKEYKNGRRIHAQMVVVGYVPNEYLKIKLLILYAKLGDLETAHALFDKLL 218
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K L+SWNAMIAG+VQKG + GL Y++MR
Sbjct: 219 EKNLISWNAMIAGFVQKGCGEFGLDLYYKMR 249
>ref|XP_004295318.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Fragaria vesca subsp. vesca]
Length = 612
Score = 130 bits (327), Expect = 2e-28
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECI K+Y KGKRIH QM++VGFV NE++ KLLILYAK+GDL TA +LFD L
Sbjct: 143 YALLLQECIIWKEYMKGKRIHAQMIVVGFVENEYLKTKLLILYAKSGDLGTAHYLFDMLL 202
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
+ LVSWNA+IAGYVQKG E VGL YH+MR
Sbjct: 203 DRSLVSWNAIIAGYVQKGHEDVGLGLYHKMR 233
>ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Cucumis sativus]
gi|449526397|ref|XP_004170200.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g16470-like [Cucumis sativus]
Length = 486
Score = 129 bits (325), Expect = 3e-28
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y +LLQECIFRK+Y KGKRIH QMV+VG+VPNE+++ KLLILYAK+GDL TA L + L
Sbjct: 91 YCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYVLHEHLL 150
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K LVSWN++IAGYVQKG +VGL FY +MR
Sbjct: 151 EKSLVSWNSLIAGYVQKGLAEVGLEFYLKMR 181
>gb|EMJ13925.1| hypothetical protein PRUPE_ppa018986mg, partial [Prunus persica]
Length = 397
Score = 129 bits (324), Expect = 4e-28
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIFRK+Y+KGK IH Q+++VGFV NE++ KLLILYAK+G+L TA L DKL
Sbjct: 8 YALLLQECIFRKEYKKGKIIHAQIIVVGFVLNEYLKTKLLILYAKSGNLGTAHILLDKLL 67
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K LVSWNA+IAGYVQKG E VGLS Y++MR
Sbjct: 68 EKSLVSWNAIIAGYVQKGLEDVGLSLYYKMR 98
>gb|EPS71808.1| hypothetical protein M569_02948, partial [Genlisea aurea]
Length = 440
Score = 128 bits (322), Expect = 7e-28
Identities = 60/91 (65%), Positives = 74/91 (81%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
YS+LLQECI K+Y++G+RIH QMVIVGF P+E++ +KLLILYAKAGDL TA+ +FD L
Sbjct: 53 YSLLLQECINHKEYKRGRRIHSQMVIVGFTPDEYLKIKLLILYAKAGDLSTARAIFDDLE 112
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K ++ WNAMIAGYVQKG E+ GLS Y MR
Sbjct: 113 AKTMIPWNAMIAGYVQKGMEEFGLSVYRRMR 143
>gb|EXB56658.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 652
Score = 125 bits (315), Expect = 4e-27
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIF K+Y+ G+RIH QM+++GFVPNE++ KLLILYAK+GDL TA L DKL
Sbjct: 137 YALLLQECIFMKEYKPGRRIHSQMIVLGFVPNEYLKTKLLILYAKSGDLGTAHILLDKLV 196
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K VSWNAMIA YVQKG +VGL+ Y++MR
Sbjct: 197 EKNSVSWNAMIAAYVQKGQAEVGLNLYYKMR 227
>ref|XP_003594259.1| Thymidine kinase [Medicago truncatula] gi|355483307|gb|AES64510.1|
Thymidine kinase [Medicago truncatula]
Length = 644
Score = 125 bits (313), Expect = 8e-27
Identities = 59/91 (64%), Positives = 75/91 (82%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
YS++LQECIF K+Y +G+RIH M+IVG+VPNE++ +KLLILYAK+G L TAQFLF+ L
Sbjct: 174 YSLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLV 233
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K +WNAMIAGYVQKG E+VGL ++EMR
Sbjct: 234 EKDSFAWNAMIAGYVQKGLEEVGLETFYEMR 264
>emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 124 bits (312), Expect = 1e-26
Identities = 56/91 (61%), Positives = 74/91 (81%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQECIF+K+++ G+RIH QM++VG+ P+E++ KLLIL+AK GDL T+ LFD L
Sbjct: 94 YALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTGDLDTSHILFDDLS 153
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
K L+SWNAMIAGYVQKG E+ GL+ Y EMR
Sbjct: 154 KKSLISWNAMIAGYVQKGLEEEGLNLYDEMR 184
>ref|XP_004486547.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g16470-like, partial [Cicer arietinum]
Length = 655
Score = 124 bits (311), Expect = 1e-26
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
YS++LQECIF K Y++G+RIH M++VG+VPNE++ KLLILYAK+G L TAQFLF+ L
Sbjct: 184 YSLMLQECIFWKQYKRGRRIHAHMIVVGYVPNEYLKTKLLILYAKSGCLETAQFLFNNLV 243
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
KGL +WNA+IAGYVQKG E+VGL + MR
Sbjct: 244 EKGLFAWNAIIAGYVQKGLEEVGLETFCRMR 274
>ref|XP_006283557.1| hypothetical protein CARUB_v10004611mg [Capsella rubella]
gi|482552262|gb|EOA16455.1| hypothetical protein
CARUB_v10004611mg [Capsella rubella]
Length = 511
Score = 118 bits (296), Expect = 7e-25
Identities = 57/91 (62%), Positives = 70/91 (76%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y+++LQEC RK Y KGKRIH QMV+VGF PNE++ VKLLILYA +GDL TA LF L
Sbjct: 118 YAVMLQECKQRKGYTKGKRIHAQMVVVGFAPNEYLKVKLLILYALSGDLQTAGILFRCLQ 177
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
+ L+ WNAMI+GYVQKG E+ GL Y++MR
Sbjct: 178 CRDLIPWNAMISGYVQKGLEQDGLYIYYDMR 208
>ref|XP_006414596.1| hypothetical protein EUTSA_v10027271mg [Eutrema salsugineum]
gi|557115766|gb|ESQ56049.1| hypothetical protein
EUTSA_v10027271mg [Eutrema salsugineum]
Length = 489
Score = 117 bits (292), Expect = 2e-24
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQEC RK+Y KGKRIH QMV++GF PNE++ VKLLILYA +GDL TA LF L
Sbjct: 107 YAMLLQECKQRKEYTKGKRIHAQMVVLGFAPNEYLKVKLLILYALSGDLQTAWILFRSLL 166
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
+ L+ WNAMI+G+VQKG E+ GL Y++MR
Sbjct: 167 LRDLIPWNAMISGHVQKGLEQEGLYMYYDMR 197
>ref|XP_006414593.1| hypothetical protein EUTSA_v10026841mg [Eutrema salsugineum]
gi|557115763|gb|ESQ56046.1| hypothetical protein
EUTSA_v10026841mg [Eutrema salsugineum]
Length = 525
Score = 117 bits (292), Expect = 2e-24
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQEC RK+Y KGKRIH QMV++GF PNE++ VKLLILYA +GDL TA LF L
Sbjct: 143 YAMLLQECKQRKEYTKGKRIHAQMVVLGFAPNEYLKVKLLILYALSGDLQTAWILFRSLL 202
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
+ L+ WNAMI+G+VQKG E+ GL Y++MR
Sbjct: 203 LRDLIPWNAMISGHVQKGLEQEGLYMYYDMR 233
>ref|XP_006414591.1| hypothetical protein EUTSA_v10027220mg [Eutrema salsugineum]
gi|557115761|gb|ESQ56044.1| hypothetical protein
EUTSA_v10027220mg [Eutrema salsugineum]
Length = 525
Score = 117 bits (292), Expect = 2e-24
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQEC RK+Y KGKRIH QMV++GF PNE++ VKLLILYA +GDL TA LF L
Sbjct: 143 YAMLLQECKQRKEYTKGKRIHAQMVVLGFAPNEYLKVKLLILYALSGDLQTAWILFRSLL 202
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
+ L+ WNAMI+G+VQKG E+ GL Y++MR
Sbjct: 203 LRDLIPWNAMISGHVQKGLEQEGLYMYYDMR 233
>ref|NP_193380.3| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|223635634|sp|O23491.2|PP315_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g16470 gi|332658358|gb|AEE83758.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 115 bits (289), Expect = 5e-24
Identities = 56/91 (61%), Positives = 69/91 (75%)
Frame = -2
Query: 274 YSILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLH 95
Y++LLQEC RK+Y KGKRIH QM +VGF NE++ VKLLILYA +GDL TA LF L
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLK 170
Query: 94 TKGLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
+ L+ WNAMI+GYVQKG E+ GL Y++MR
Sbjct: 171 IRDLIPWNAMISGYVQKGLEQEGLFIYYDMR 201
>ref|XP_006283558.1| hypothetical protein CARUB_v10004611mg [Capsella rubella]
gi|482552263|gb|EOA16456.1| hypothetical protein
CARUB_v10004611mg [Capsella rubella]
Length = 391
Score = 114 bits (285), Expect = 1e-23
Identities = 56/88 (63%), Positives = 67/88 (76%)
Frame = -2
Query: 265 LLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLHTKG 86
+LQEC RK Y KGKRIH QMV+VGF PNE++ VKLLILYA +GDL TA LF L +
Sbjct: 1 MLQECKQRKGYTKGKRIHAQMVVVGFAPNEYLKVKLLILYALSGDLQTAGILFRCLQCRD 60
Query: 85 LVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
L+ WNAMI+GYVQKG E+ GL Y++MR
Sbjct: 61 LIPWNAMISGYVQKGLEQDGLYIYYDMR 88
>ref|XP_006414344.1| hypothetical protein EUTSA_v10025426mg [Eutrema salsugineum]
gi|557115514|gb|ESQ55797.1| hypothetical protein
EUTSA_v10025426mg [Eutrema salsugineum]
Length = 389
Score = 113 bits (283), Expect = 2e-23
Identities = 55/89 (61%), Positives = 68/89 (76%)
Frame = -2
Query: 268 ILLQECIFRKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLHTK 89
+LLQEC RK+Y KGKRIH QM +VGF PNE++ VKLLILYA +GDL TA LF L +
Sbjct: 1 MLLQECKQRKEYTKGKRIHAQMAVVGFAPNEYLKVKLLILYALSGDLQTAWILFRSLLLR 60
Query: 88 GLVSWNAMIAGYVQKGFEKVGLSFYHEMR 2
L+ WNAMI+G+VQKG E+ GL Y++MR
Sbjct: 61 DLIPWNAMISGHVQKGLEQEGLYMYYDMR 89
>ref|XP_002520501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540343|gb|EEF41914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 383
Score = 112 bits (281), Expect = 4e-23
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = -2
Query: 244 RKDYRKGKRIHWQMVIVGFVPNEHVHVKLLILYAKAGDLYTAQFLFDKLHTKGLVSWNAM 65
RK YR G+RIH QMV+VG+V NE++ KLLILYAK+GDL TA FD L K L+SWNAM
Sbjct: 21 RKQYRMGRRIHAQMVVVGYVANEYLKNKLLILYAKSGDLKTAHMFFDNLMDKSLISWNAM 80
Query: 64 IAGYVQKGFEKVGLSFYHEMR 2
IAGYVQ G E++GLS Y++MR
Sbjct: 81 IAGYVQSGLEEIGLSLYYKMR 101