BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033926
         (336 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21655.3| unnamed protein product [Vitis vinifera]               94   2e-17
gb|EOY01429.1| X-ray repair cross complementing 2 (XRCC2), putat...    89   8e-16
ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog ...    87   3e-15
ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog ...    82   7e-14
gb|EMJ27351.1| hypothetical protein PRUPE_ppa014924mg, partial [...    81   2e-13
ref|XP_006592059.1| PREDICTED: DNA repair protein XRCC2 homolog ...    79   5e-13
ref|XP_006590830.1| PREDICTED: DNA repair protein XRCC2 homolog ...    78   1e-12
ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog ...    78   1e-12
ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog ...    77   2e-12
gb|ESW03671.1| hypothetical protein PHAVU_011G032400g [Phaseolus...    72   6e-11
ref|XP_004970726.1| PREDICTED: DNA repair protein XRCC2 homolog ...    62   8e-08
ref|XP_006280631.1| hypothetical protein CARUB_v10026593mg [Caps...    60   4e-07
gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japo...    57   3e-06
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp....    57   3e-06
ref|XP_006394144.1| hypothetical protein EUTSA_v10005594mg [Eutr...    56   6e-06
ref|NP_001169396.1| uncharacterized protein LOC100383265 [Zea ma...    56   6e-06
ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog ...    55   1e-05

>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
 Frame = +2

Query: 62  RNPRRWPTAEASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDE---NSKHQSQQ 232
           R   +  + + S L   + G Q L YRE+MPLVWQSFVTHR+ VR +D+   NSK+QS+ 
Sbjct: 238 RTSMKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILVRAADDDPANSKYQSRS 297

Query: 233 IYLTEWLLPSIKSSDTFTVNDAGIFLIS 316
           I+L+EWL+PS+  SD F V DAG+F++S
Sbjct: 298 IFLSEWLMPSLNFSDKFIVRDAGVFVVS 325


>gb|EOY01429.1| X-ray repair cross complementing 2 (XRCC2), putative [Theobroma
           cacao]
          Length = 340

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
 Frame = +2

Query: 65  NPRRWPTAEASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDE---NSKHQSQQI 235
           N R+WP+ +     + +   Q + YREYMP VWQSFVTHR+ V+ +D    N +H++  I
Sbjct: 254 NNRKWPSTDNPHSRSVTSSDQQVPYREYMPAVWQSFVTHRILVQATDNDFVNGEHRNVSI 313

Query: 236 YLTEWLLPSIKSSDTFTVNDAGIFLIS 316
           YL+EWLLP + S D F V D G+F++S
Sbjct: 314 YLSEWLLPPLNSLDKFVVGDTGVFILS 340


>ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Solanum
           tuberosum] gi|565400189|ref|XP_006365614.1| PREDICTED:
           DNA repair protein XRCC2 homolog isoform X2 [Solanum
           tuberosum]
          Length = 338

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/63 (63%), Positives = 52/63 (82%)
 Frame = +2

Query: 128 ALLYREYMPLVWQSFVTHRVHVRPSDENSKHQSQQIYLTEWLLPSIKSSDTFTVNDAGIF 307
           A LYREYMP VWQSFV+HR+ VR SD+ SK+Q + IYL+EWLLPS+K SD FT+N+ G +
Sbjct: 277 AQLYREYMPSVWQSFVSHRILVRRSDD-SKYQKKPIYLSEWLLPSLKLSDKFTINEDGAY 335

Query: 308 LIS 316
           ++S
Sbjct: 336 IVS 338


>ref|XP_004505753.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cicer
           arietinum] gi|502144799|ref|XP_004505754.1| PREDICTED:
           DNA repair protein XRCC2 homolog isoform X2 [Cicer
           arietinum] gi|502144801|ref|XP_004505755.1| PREDICTED:
           DNA repair protein XRCC2 homolog isoform X3 [Cicer
           arietinum]
          Length = 328

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +2

Query: 89  EASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDEN---SKHQSQQIYLTEWLLP 259
           E   L N +R  Q   YREYMP VWQSFVTHR+ +R SD++   S  Q+   +L EWLLP
Sbjct: 250 EERSLRNVTRNYQHFQYREYMPSVWQSFVTHRILIRSSDDHSATSNCQNSSFFLLEWLLP 309

Query: 260 SIKSSDTFTVNDAGIFLIS 316
            +  SDT  V DAG+F+ S
Sbjct: 310 KLSFSDTIVVKDAGVFVDS 328


>gb|EMJ27351.1| hypothetical protein PRUPE_ppa014924mg, partial [Prunus persica]
          Length = 309

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = +2

Query: 89  EASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDEN---SKHQSQQIYLTEWLLP 259
           +ASGL N +   Q L YREYMP VWQSFVTH++ VR SD++     ++   +YL+EWLLP
Sbjct: 238 DASGLRNLASNTQQLPYREYMPSVWQSFVTHKILVRASDDHMPIRHYEEHSVYLSEWLLP 297

Query: 260 SIKSSDTFTVND 295
           SI   D FTV D
Sbjct: 298 SISFRDKFTVKD 309


>ref|XP_006592059.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Glycine
           max]
          Length = 310

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = +2

Query: 107 NASRGIQALLYREYMPLVWQSFVTHRVHVRPSDEN---SKHQSQQIYLTEWLLPSIKSSD 277
           N +R  Q  LYREYMP VWQSFVTHR+ VR SDE+   + +Q+   YL EWLLP +   D
Sbjct: 238 NVTRNHQNYLYREYMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSFPD 297

Query: 278 TFTVNDAGIFLIS 316
              V DAG+F+ S
Sbjct: 298 KIVVKDAGVFVDS 310


>ref|XP_006590830.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Glycine
           max] gi|571488077|ref|XP_006590831.1| PREDICTED: DNA
           repair protein XRCC2 homolog isoform X3 [Glycine max]
           gi|571488079|ref|XP_006590832.1| PREDICTED: DNA repair
           protein XRCC2 homolog isoform X4 [Glycine max]
          Length = 312

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = +2

Query: 107 NASRGIQALLYREYMPLVWQSFVTHRVHVRPSDEN---SKHQSQQIYLTEWLLPSIKSSD 277
           N +R  Q   YREYMP VWQSFVTHR+ VR SDE+   + +Q+   YL EWLLP +   D
Sbjct: 240 NVARNHQNFQYREYMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSFPD 299

Query: 278 TFTVNDAGIFLIS 316
              V DAG+F+ S
Sbjct: 300 KIVVKDAGVFVDS 312


>ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Glycine
           max]
          Length = 264

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = +2

Query: 107 NASRGIQALLYREYMPLVWQSFVTHRVHVRPSDEN---SKHQSQQIYLTEWLLPSIKSSD 277
           N +R  Q   YREYMP VWQSFVTHR+ VR SDE+   + +Q+   YL EWLLP +   D
Sbjct: 192 NVARNHQNFQYREYMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSFPD 251

Query: 278 TFTVNDAGIFLIS 316
              V DAG+F+ S
Sbjct: 252 KIVVKDAGVFVDS 264


>ref|XP_004298620.1| PREDICTED: DNA repair protein XRCC2 homolog [Fragaria vesca subsp.
           vesca]
          Length = 316

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +2

Query: 89  EASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDE---NSKHQSQQIYLTEWLLP 259
           E SG  + +   Q L YRE+MP +WQSF+TH++ VR SD+       Q   +Y +EWLLP
Sbjct: 238 EESGGRSITSSTQRLPYREFMPPIWQSFITHKILVRASDDLLPIRLDQEHSLYFSEWLLP 297

Query: 260 SIKSSDTFTVNDAGIFLIS 316
           S+   D F V DAGIF++S
Sbjct: 298 SLSFQDKFVVKDAGIFIVS 316


>gb|ESW03671.1| hypothetical protein PHAVU_011G032400g [Phaseolus vulgaris]
          Length = 317

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +2

Query: 107 NASRGIQALLYREYMPLVWQSFVTHRVHVRPSDEN---SKHQSQQIYLTEWLLPSIKSSD 277
           N +R  +   +REYMP VWQSFVTHR+ +  SDE+   + HQ+  IY  EWLLP +   D
Sbjct: 245 NMTRNHKNFQHREYMPSVWQSFVTHRILLHSSDEHPGTTNHQNSSIYSLEWLLPRLSFPD 304

Query: 278 TFTVNDAGIFLIS 316
              V DAG+F+ S
Sbjct: 305 KIVVKDAGVFVQS 317


>ref|XP_004970726.1| PREDICTED: DNA repair protein XRCC2 homolog [Setaria italica]
          Length = 338

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = +2

Query: 125 QALLYREYMPLVWQSFVTHRVHVRPSDENSKHQSQQIYLT---EWLLPSIKSSDTFTVND 295
           + L YREYMP +WQSFVTHR++++   E    Q   ++ T   EW+ PS+K+ + F++ D
Sbjct: 272 RTLSYREYMPSIWQSFVTHRINLQEEAEVPSVQENGVHSTHTSEWVQPSLKTKEKFSIVD 331

Query: 296 AGIFLI 313
            G+ LI
Sbjct: 332 DGVILI 337


>ref|XP_006280631.1| hypothetical protein CARUB_v10026593mg [Capsella rubella]
           gi|565433449|ref|XP_006280632.1| hypothetical protein
           CARUB_v10026593mg [Capsella rubella]
           gi|482549335|gb|EOA13529.1| hypothetical protein
           CARUB_v10026593mg [Capsella rubella]
           gi|482549336|gb|EOA13530.1| hypothetical protein
           CARUB_v10026593mg [Capsella rubella]
          Length = 379

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
 Frame = +2

Query: 89  EASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDENSKHQSQQ----IYLTEWLL 256
           E SG  NA+   Q   +RE+MP  WQ+FVTH++ +R S ++   Q+ Q     Y  EWL 
Sbjct: 302 ELSG--NAAIKAQQPPFREFMPSSWQAFVTHKIIIRKSADHHSSQTGQESLSAYSLEWLQ 359

Query: 257 PSIKSSDTFTVNDAGIFLIS 316
           P + S D F V+D+GI  +S
Sbjct: 360 PQLSSIDQFIVDDSGIVTVS 379


>gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japonica Group]
          Length = 284

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
 Frame = +2

Query: 137 YREYMPLVWQSFVTHRVHVRPSDENSKHQSQQ------IYLTEWLLPSIKSSDTFTVNDA 298
           YRE+MP VWQSFVTHR+ ++   + ++  S Q      +  +EW+ PS+ + D F++ D 
Sbjct: 219 YREFMPSVWQSFVTHRIKLQDLGQEAELFSGQENKELPLRTSEWMQPSLNTKDKFSITDD 278

Query: 299 GIFLI 313
           G+ LI
Sbjct: 279 GVILI 283


>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310742|gb|EFH41166.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
 Frame = +2

Query: 107 NASRGIQALLYREYMPLVWQSFVTHRVHVRPSDENSKHQSQQ----IYLTEWLLPSIKSS 274
           NA+   Q  L RE+MP  WQ+FVTH++ +R S ++   Q+ Q     YL EWL P + S 
Sbjct: 269 NAASKAQQPLIREFMPSSWQAFVTHKIIIRKSADHRSLQTGQQNLSAYLLEWLQPQLSSI 328

Query: 275 DTFTVND 295
           D F V+D
Sbjct: 329 DRFIVDD 335


>ref|XP_006394144.1| hypothetical protein EUTSA_v10005594mg [Eutrema salsugineum]
           gi|557090783|gb|ESQ31430.1| hypothetical protein
           EUTSA_v10005594mg [Eutrema salsugineum]
          Length = 355

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = +2

Query: 65  NPRRWPTAEASGLNNASRGIQALLYREYMPLVWQSFVTHRVHVRPSDENSK----HQSQQ 232
           N R++ + +    N++SR  Q   +RE+MP  WQ+FVTH++ +R S ++       QS  
Sbjct: 234 NSRKFSSNDDLSGNSSSRAHQPP-FREFMPSTWQAFVTHKIIIRKSGDHQSLQTGKQSLS 292

Query: 233 IYLTEWLLPSIKSSDTFTVND 295
            Y  EWL P + S D F V+D
Sbjct: 293 AYSLEWLQPQLSSIDRFIVDD 313


>ref|NP_001169396.1| uncharacterized protein LOC100383265 [Zea mays]
           gi|224029093|gb|ACN33622.1| unknown [Zea mays]
           gi|414879491|tpg|DAA56622.1| TPA: hypothetical protein
           ZEAMMB73_585387 [Zea mays]
          Length = 340

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = +2

Query: 56  FFRNPRRWPTAEASGLNNASRGIQALLY-REYMPLVWQSFVTHRVHVRPSDENSKHQSQQ 232
           F R+  ++   + SGL  + R  +  L  REYMP +WQSFVTHR++++   E       +
Sbjct: 250 FNRDSSKYMLEDPSGLGYSRREEERTLSNREYMPSIWQSFVTHRINLQVEAEVPSVLESE 309

Query: 233 I---YLTEWLLPSIKSSDTFTVNDAGIFLI 313
           +   + +EW+ P +K  + F++ D G+ LI
Sbjct: 310 VLPLHTSEWVQPCLKMKEKFSIMDDGVNLI 339


>ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog [Brachypodium
           distachyon]
          Length = 335

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
 Frame = +2

Query: 140 REYMPLVWQSFVTHRVHVRPSDENSKHQSQQ---IYLTEWLLPSIKSSDTFTVNDAGIFL 310
           REYMP VWQ+FVTHR+ ++     S  Q  +   I+ +EW+ PS+   + F + D+G+ +
Sbjct: 274 REYMPSVWQTFVTHRIKLQEESGISSEQESEVLSIHTSEWVRPSLNIKEKFYIRDSGVVV 333

Query: 311 I 313
           I
Sbjct: 334 I 334