BLASTX nr result

ID: Catharanthus23_contig00033650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033650
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, part...    59   1e-16
ref|XP_002331338.1| predicted protein [Populus trichocarpa]            53   9e-09
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659...    42   9e-07
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    43   3e-06

>ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, partial [Populus
           trichocarpa] gi|550324501|gb|ERP53444.1| hypothetical
           protein POPTR_0014s18610g, partial [Populus trichocarpa]
          Length = 303

 Score = 58.5 bits (140), Expect(2) = 1e-16
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 19/95 (20%)
 Frame = -2

Query: 233 LCWKLKTLKGPLKELNKKDYSHI*SRTSKERTQTTV-------------------GTTPR 111
           LC +LK LKGPLKELN+  ++HI  R S+  +Q                          +
Sbjct: 189 LCRRLKLLKGPLKELNRLHFNHISERVSRLESQLEQLQNAFQQDRDNQFLFAQDRFLRSK 248

Query: 110 LPYLSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLI 6
           L  L  A+++F +QKIKC+FL + D G++ FH+L+
Sbjct: 249 LSSLKFAEKQFFSQKIKCNFLKHSDNGSKFFHALL 283



 Score = 53.1 bits (126), Expect(2) = 1e-16
 Identities = 25/61 (40%), Positives = 33/61 (54%)
 Frame = -1

Query: 411 HFYPPDFTSDHSPCIVSLFDMPRKPRPSFMFFNMWVDHDSFMNLVQQRWNTQFMGTKQFT 232
           HF  P    DHSP +V L D   + R +F FFNMW  HD F+ +V   W++   GT  + 
Sbjct: 130 HFGSPSVFLDHSPAVVRL-DPYMQGRQNFNFFNMWATHDQFLQVVSSCWSSPVYGTPMYI 188

Query: 231 L 229
           L
Sbjct: 189 L 189


>ref|XP_002331338.1| predicted protein [Populus trichocarpa]
          Length = 819

 Score = 52.8 bits (125), Expect(2) = 9e-09
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = -1

Query: 420 AKAHFYPPDFTSDHSPCIVSLFDMPRKPRPSFMFFNMWVDHDSFMNLVQQRWNTQFMGTK 241
           ++A F P    SDHSP +V +    +  +  F FF+MW+DHD FM LV++ W+    G  
Sbjct: 592 SEARFLPSGM-SDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCP 650

Query: 240 QFTL 229
            + L
Sbjct: 651 MYQL 654



 Score = 32.3 bits (72), Expect(2) = 9e-09
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 19/95 (20%)
 Frame = -2

Query: 233 LCWKLKTLKGPLKELNKKDYSHI*SRT-----SKERTQTTVGTTPRLPYLS--------- 96
           LC KL+ LK  LK  N   +S+I  R        ++ Q  + T    P L          
Sbjct: 654 LCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHTAHENPILCMRERDVVHK 713

Query: 95  -----KAKRKFCAQKIKCDFL*NGDKGTRLFHSLI 6
                +A+  F  QK +  +L  GD+ T  FH  +
Sbjct: 714 YASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSV 748


>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
          Length = 964

 Score = 42.4 bits (98), Expect(2) = 9e-07
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
 Frame = -2

Query: 233 LCWKLKTLKGPLKELNKKDYSHI*SRTSKERTQ-----TTVGTTPRLP------------ 105
           +C KLK LK PLK L K+++S+I +R      +      ++   P+ P            
Sbjct: 645 VCKKLKALKAPLKNLFKQEFSNISNRVELAEAEYNSVLNSIKQNPQDPSLLALANRTRGQ 704

Query: 104 --YLSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIK 3
              L KA+    AQ IK  +L   DK ++ FH+LIK
Sbjct: 705 TIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIK 740



 Score = 35.8 bits (81), Expect(2) = 9e-07
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 387 SDHSPCIVSLFDMPRKPRPSFMFFNMWVDHDSFMNLVQQRWNTQFMGTKQF 235
           SDH+P +V+   +  +    F F N+ VDH +F+ +V   W     G   F
Sbjct: 593 SDHTPLVVTTELVVPRGNSPFKFNNLIVDHPNFLRIVADGWKQNIHGCSMF 643


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -1

Query: 408 FYPPDFTSDHSPCIVSLFDMPRKPRPSFMFFNMWVDHDSFMNLVQQRW-NTQFMGTKQF 235
           F PPDF SDH+ C V L   P K +  F FFN  + +  F+NLV   W +T  +G+  F
Sbjct: 215 FGPPDF-SDHASCGVVLELDPIKAKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMF 272



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
 Frame = -2

Query: 224 KLKTLKGPLKELNKKDYSHI*SRT------------------SKERTQTTVGTTPRLPYL 99
           KLK LK P+K+ ++ +YS++  RT                  S E     +    +   L
Sbjct: 277 KLKALKKPIKDFSRLNYSNLEKRTEEAHETLLSFQNLTLDNPSLENAAHELEAQRKWQIL 336

Query: 98  SKAKRKFCAQKIKCDFL*NGDKGTRLFHSL 9
           + A+  F  Q+ +  +   GD  TR FH +
Sbjct: 337 ATAEESFFRQRSRVTWFAEGDGNTRYFHRM 366


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