BLASTX nr result

ID: Catharanthus23_contig00033646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033646
         (470 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247345.1| PREDICTED: uncharacterized protein LOC101245...   100   2e-19
ref|XP_006351687.1| PREDICTED: intracellular protein transport p...    98   1e-18
emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]    77   2e-12
ref|XP_004292192.1| PREDICTED: uncharacterized protein LOC101292...    57   2e-06

>ref|XP_004247345.1| PREDICTED: uncharacterized protein LOC101245695 [Solanum
           lycopersicum]
          Length = 1195

 Score =  100 bits (249), Expect = 2e-19
 Identities = 66/160 (41%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
 Frame = +1

Query: 1   RVPGRSRFSRRENMKKLRDKFVAPMTPRPAASAGIDQLSHVGYTELKITXXXXXXXXXXX 180
           R PGRSRFSRR++ KK+RDK   P +PR  ASA +D LSHVGYTELKIT           
Sbjct: 178 RAPGRSRFSRRDSFKKIRDKISGPESPRTRASA-LDPLSHVGYTELKITSDSESEIQMSD 236

Query: 181 XXXVTFAFRGKSDFYTEFQQGSKKLPRVDSDESDASK----QMHHTSEPLPSLLDQPVQL 348
                 A RGK+D        S+    V  D+    K    Q   +SE  P  LDQP QL
Sbjct: 237 DEDGCSATRGKND--------SRSEDNVPHDKGITQKLETDQPRQSSESKPYHLDQPRQL 288

Query: 349 ESSEHNIMNSSGPGAFVQHGLEEIQWSHPNPKPDLSALPE 468
             +    ++      FV HGL E+ W   +PK   S LPE
Sbjct: 289 TVNSGKTVSFQASDDFVGHGLAELDWESLSPKTGASVLPE 328


>ref|XP_006351687.1| PREDICTED: intracellular protein transport protein USO1-like
           [Solanum tuberosum]
          Length = 1151

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 63/158 (39%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
 Frame = +1

Query: 1   RVPGRSRFSRRENMKKLRDKFVAPMTPRPAASAGIDQLSHVGYTELKITXXXXXXXXXXX 180
           R PGRSRFSRR++ KK+RDK   P +PR  ASA +D LSHVGYTELKIT           
Sbjct: 183 RAPGRSRFSRRDSFKKIRDKISGPESPRTRASA-LDPLSHVGYTELKITSDSESEIQMSD 241

Query: 181 XXXVTFAFRGKSDFYTE--FQQGSKKLPRVDSDESDASKQMHHTSEPLPSLLDQPVQLES 354
                 A   K+D  +E   + G     ++++D      Q   +SE  P  LD+P+QL  
Sbjct: 242 DEDGYSATHVKNDSRSEDNVRHGKGITRKLETD------QPRQSSESKPYHLDRPMQLAG 295

Query: 355 SEHNIMNSSGPGAFVQHGLEEIQWSHPNPKPDLSALPE 468
           S    ++      FV HGL E+ W   +PK   S LPE
Sbjct: 296 SSGKTVSFQASDEFVGHGLAELDWESLSPKTGASVLPE 333


>emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]
          Length = 778

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
 Frame = +1

Query: 1   RVPGRSRFSRRENMKKLRDKFVAPMTPRPAASAGIDQLSHVGYTELKITXXXXXXXXXXX 180
           R+PGRS  + R+N+KK+RDK    +T     +   D LSHVGY+ELK T           
Sbjct: 194 RLPGRSHLNHRDNLKKIRDKVSGSVTSSSPRNGASDHLSHVGYSELKFTSDSESEVPLSD 253

Query: 181 XXXVTFAFRGKSDFYTEF--QQGSKKLPRVDSDESDASKQMHHTSEPLPSLLDQPVQLES 354
              V      KS            ++  +  SD+    KQ+H  S P PSLLD  VQ   
Sbjct: 254 DDIVGSLVHEKSXRKQNLTATXAPERSCKPLSDDVALGKQIHQASNPGPSLLDSYVQTHV 313

Query: 355 SEHNIMNSSGPGAFVQHGLEEIQWSHPNPKPDLSALPE 468
            E + M         ++   E+ W   N K + SALPE
Sbjct: 314 FETHDMKCLDSEVATENRFGELNWQQANQKFNPSALPE 351


>ref|XP_004292192.1| PREDICTED: uncharacterized protein LOC101292479 [Fragaria vesca
           subsp. vesca]
          Length = 931

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
 Frame = +1

Query: 1   RVPGRSRFSR-RENMKKLRDKFVAPMTPRPAASAGIDQLSHVGYTELKITXXXXXXXXXX 177
           R+P RSR +R +++ KK RDK  A  T R +A  G+D LSHVGY+EL +           
Sbjct: 198 RLPNRSRSNRDQDSSKKTRDKSPASATSRHSAKVGVDPLSHVGYSELNLFSDTDSESLFT 257

Query: 178 XXXXVTFAFRGKSDFYTE-FQQGSKKLPRVDSDESDASKQMHHTSEPLPSLLDQ-PVQLE 351
                +       +   E  ++ S+  P+   +   + +  + +S+P  SL +  PV  +
Sbjct: 258 DGDDGSNVSSASHEPKMECSRRASRYRPKAPPNGLKSRRHRNRSSKPKRSLSEPWPVFRK 317

Query: 352 SSEHNIMNSSGPGAFVQHGLEEIQWSHPNPKPDLSALPE 468
           SS+   + S       + G  E+ +   N K + SALPE
Sbjct: 318 SSDVKYLGSDNE---FEIGFRELNYQQSNQKSNPSALPE 353


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