BLASTX nr result

ID: Catharanthus23_contig00033600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033600
         (259 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364202.1| PREDICTED: uncharacterized protein At1g04910...    62   8e-08
ref|XP_004235991.1| PREDICTED: uncharacterized protein At1g04910...    62   1e-07

>ref|XP_006364202.1| PREDICTED: uncharacterized protein At1g04910-like isoform X1
           [Solanum tuberosum]
          Length = 442

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +1

Query: 28  MIDSLLKRPLFGITVITFALFLVIXXXXXXXXXXXXXXXXXXXX-QRPEIWTLRRVVGWR 204
           MI S +++PLFG+T++T +LFL++                     +RPEIW++RR+  WR
Sbjct: 1   MIASTVRKPLFGVTLLTLSLFLLLFFFTPFSFFSDPSVTFNSSWRERPEIWSMRRLAEWR 60

Query: 205 PCKWWLQ 225
           PC WWLQ
Sbjct: 61  PCNWWLQ 67


>ref|XP_004235991.1| PREDICTED: uncharacterized protein At1g04910-like [Solanum
           lycopersicum]
          Length = 442

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +1

Query: 28  MIDSLLKRPLFGITVITFALFLVIXXXXXXXXXXXXXXXXXXXXQ-RPEIWTLRRVVGWR 204
           MI S +++PLFG+T+ T +LFL++                    + RPEIW++RR+  WR
Sbjct: 1   MIASTVRKPLFGVTLFTLSLFLILFFFAPFSFFSDPSVTFNSSRRARPEIWSIRRLAEWR 60

Query: 205 PCKWWLQ 225
           PC WWLQ
Sbjct: 61  PCNWWLQ 67


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