BLASTX nr result
ID: Catharanthus23_contig00031465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031465
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361709.1| PREDICTED: ras-related protein RABC2a-like [... 120 2e-25
ref|XP_004250031.1| PREDICTED: ras-related protein RABC2a-like [... 119 5e-25
ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [... 112 7e-23
ref|XP_002311057.1| GTP-binding family protein [Populus trichoca... 111 1e-22
ref|XP_003536285.1| PREDICTED: ras-related protein RABC2a [Glyci... 108 6e-22
ref|XP_002316401.1| GTP-binding family protein [Populus trichoca... 108 6e-22
gb|EXB39458.1| Ras-related protein RABC2a [Morus notabilis] 107 1e-21
ref|XP_006436532.1| hypothetical protein CICLE_v10033703mg [Citr... 107 1e-21
gb|EOY18854.1| Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rab... 107 1e-21
ref|XP_006843117.1| hypothetical protein AMTR_s00140p00089630 [A... 107 2e-21
ref|XP_006289737.1| hypothetical protein CARUB_v10003305mg [Caps... 107 2e-21
ref|XP_002532788.1| protein with unknown function [Ricinus commu... 107 2e-21
ref|NP_568121.1| ras-related protein RABC2a [Arabidopsis thalian... 106 3e-21
gb|AFK40035.1| unknown [Medicago truncatula] 106 3e-21
ref|XP_004249661.1| PREDICTED: ras-related protein RABC2a-like [... 106 4e-21
ref|XP_006398804.1| hypothetical protein EUTSA_v10014668mg [Eutr... 105 5e-21
ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [... 105 5e-21
ref|XP_006847234.1| hypothetical protein AMTR_s00017p00258370 [A... 105 8e-21
ref|XP_002322909.1| hypothetical protein POPTR_0016s10830g [Popu... 105 8e-21
ref|XP_004515929.1| PREDICTED: ras-related protein RABC2a-like [... 104 1e-20
>ref|XP_006361709.1| PREDICTED: ras-related protein RABC2a-like [Solanum tuberosum]
Length = 217
Score = 120 bits (301), Expect = 2e-25
Identities = 60/78 (76%), Positives = 68/78 (87%), Gaps = 5/78 (6%)
Frame = -3
Query: 220 IMGSRKN-----CVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKM 56
+MG+RKN S+DYSFKILL+GDSGVGKSSLLL+FIS FQDLSPT+GVDFK++M
Sbjct: 1 MMGTRKNHNVGFSSSYDYSFKILLVGDSGVGKSSLLLTFISHHLFQDLSPTVGVDFKIRM 60
Query: 55 LTVGGKRLKLTIWDTAGQ 2
LTVGGKRLKLTIWDTAGQ
Sbjct: 61 LTVGGKRLKLTIWDTAGQ 78
>ref|XP_004250031.1| PREDICTED: ras-related protein RABC2a-like [Solanum lycopersicum]
Length = 217
Score = 119 bits (297), Expect = 5e-25
Identities = 60/78 (76%), Positives = 67/78 (85%), Gaps = 5/78 (6%)
Frame = -3
Query: 220 IMGSRKN-----CVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKM 56
+MGSRKN S+DYSFKILL+GDSGVGKSSLLL+FIS FQDLSPT+GVDFK++M
Sbjct: 1 MMGSRKNQSVGFSNSYDYSFKILLVGDSGVGKSSLLLTFISHHLFQDLSPTVGVDFKIRM 60
Query: 55 LTVGGKRLKLTIWDTAGQ 2
LTVG KRLKLTIWDTAGQ
Sbjct: 61 LTVGSKRLKLTIWDTAGQ 78
>ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related
protein RABC2a-like [Cucumis sativus]
Length = 215
Score = 112 bits (279), Expect = 7e-23
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = -3
Query: 211 SRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRL 32
S+ C+S+DYSFKILLIGDSGVGKSS+LLS+IS DLSPTIGVDFK+KM+TVGGK+L
Sbjct: 6 SKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFV-HDLSPTIGVDFKIKMVTVGGKKL 64
Query: 31 KLTIWDTAGQ 2
KLTIWDTAGQ
Sbjct: 65 KLTIWDTAGQ 74
>ref|XP_002311057.1| GTP-binding family protein [Populus trichocarpa]
gi|222850877|gb|EEE88424.1| GTP-binding family protein
[Populus trichocarpa]
Length = 214
Score = 111 bits (277), Expect = 1e-22
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = -3
Query: 193 SFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKLTIWD 14
S+DYSFKILLIGDSGVGKSSLLLSFIS +DLSPTIGVDFK+KMLTVGGKRLKLTIWD
Sbjct: 12 SYDYSFKILLIGDSGVGKSSLLLSFISSSV-RDLSPTIGVDFKVKMLTVGGKRLKLTIWD 70
Query: 13 TAGQ 2
TAGQ
Sbjct: 71 TAGQ 74
>ref|XP_003536285.1| PREDICTED: ras-related protein RABC2a [Glycine max]
gi|255629553|gb|ACU15124.1| unknown [Glycine max]
Length = 212
Score = 108 bits (271), Expect = 6e-22
Identities = 55/71 (77%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = -3
Query: 211 SRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQ-AFQDLSPTIGVDFKLKMLTVGGKR 35
SR ++DYSFK+LLIGDSGVGKSSLLLSFIS + DLSPTIGVDFK+K+ TVGGKR
Sbjct: 5 SRVESSNYDYSFKVLLIGDSGVGKSSLLLSFISNSNSINDLSPTIGVDFKIKLFTVGGKR 64
Query: 34 LKLTIWDTAGQ 2
LKLTIWDTAGQ
Sbjct: 65 LKLTIWDTAGQ 75
>ref|XP_002316401.1| GTP-binding family protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus
trichocarpa] gi|222865441|gb|EEF02572.1| GTP-binding
family protein [Populus trichocarpa]
Length = 212
Score = 108 bits (271), Expect = 6e-22
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = -3
Query: 193 SFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKLTIWD 14
S+DYSFKILLIGDSGVGKSSLLLSFIS +DLSPTIGVDFK+K+LT+GGKRLKLTIWD
Sbjct: 12 SYDYSFKILLIGDSGVGKSSLLLSFISNSV-RDLSPTIGVDFKIKVLTLGGKRLKLTIWD 70
Query: 13 TAGQ 2
TAGQ
Sbjct: 71 TAGQ 74
>gb|EXB39458.1| Ras-related protein RABC2a [Morus notabilis]
Length = 216
Score = 107 bits (268), Expect = 1e-21
Identities = 56/76 (73%), Positives = 62/76 (81%), Gaps = 4/76 (5%)
Frame = -3
Query: 217 MGSRKNCV----SFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLT 50
MGS V ++DYSFKILLIGDSGVGKSS+LLSFIS DLSPTIGVDFK+K+L+
Sbjct: 1 MGSSTKLVGNNNNYDYSFKILLIGDSGVGKSSILLSFISNSLHHDLSPTIGVDFKMKLLS 60
Query: 49 VGGKRLKLTIWDTAGQ 2
VGGK LKLTIWDTAGQ
Sbjct: 61 VGGKILKLTIWDTAGQ 76
>ref|XP_006436532.1| hypothetical protein CICLE_v10033703mg [Citrus clementina]
gi|568863783|ref|XP_006485310.1| PREDICTED: ras-related
protein RABC2a-like [Citrus sinensis]
gi|557538728|gb|ESR49772.1| hypothetical protein
CICLE_v10033703mg [Citrus clementina]
Length = 210
Score = 107 bits (268), Expect = 1e-21
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = -3
Query: 217 MGSRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGK 38
MGS+ S+DYSFKILLIGDSGVGKSS+LLS IS D SPTIGVDFK+K+LTVGGK
Sbjct: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGK 59
Query: 37 RLKLTIWDTAGQ 2
RLKLTIWDTAGQ
Sbjct: 60 RLKLTIWDTAGQ 71
>gb|EOY18854.1| Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 1
[Theobroma cacao]
Length = 216
Score = 107 bits (268), Expect = 1e-21
Identities = 55/64 (85%), Positives = 59/64 (92%)
Frame = -3
Query: 193 SFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKLTIWD 14
S+DYSFKILLIGDSGVGKSSLL+SFIS DLSPTIGVDFK+KM+TVGGKRLKLTIWD
Sbjct: 14 SYDYSFKILLIGDSGVGKSSLLVSFISNFV-HDLSPTIGVDFKIKMVTVGGKRLKLTIWD 72
Query: 13 TAGQ 2
TAGQ
Sbjct: 73 TAGQ 76
>ref|XP_006843117.1| hypothetical protein AMTR_s00140p00089630 [Amborella trichopoda]
gi|548845327|gb|ERN04792.1| hypothetical protein
AMTR_s00140p00089630 [Amborella trichopoda]
Length = 217
Score = 107 bits (267), Expect = 2e-21
Identities = 54/72 (75%), Positives = 62/72 (86%)
Frame = -3
Query: 217 MGSRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGK 38
MGS S+DY FKILL+GDSGVGKSS+LLSF SQ +F DLSPTIGVDFK+++LTVG K
Sbjct: 1 MGSSSGQGSYDYHFKILLVGDSGVGKSSILLSFTSQ-SFNDLSPTIGVDFKIRVLTVGDK 59
Query: 37 RLKLTIWDTAGQ 2
+LKLTIWDTAGQ
Sbjct: 60 KLKLTIWDTAGQ 71
>ref|XP_006289737.1| hypothetical protein CARUB_v10003305mg [Capsella rubella]
gi|482558443|gb|EOA22635.1| hypothetical protein
CARUB_v10003305mg [Capsella rubella]
Length = 210
Score = 107 bits (267), Expect = 2e-21
Identities = 55/72 (76%), Positives = 60/72 (83%)
Frame = -3
Query: 217 MGSRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGK 38
MGS +D SFKILLIGDSGVGKSSLL+SFIS +DL+PTIGVDFK+K LTVGGK
Sbjct: 1 MGSSSGLSGYDLSFKILLIGDSGVGKSSLLVSFISSSV-EDLAPTIGVDFKIKQLTVGGK 59
Query: 37 RLKLTIWDTAGQ 2
RLKLTIWDTAGQ
Sbjct: 60 RLKLTIWDTAGQ 71
>ref|XP_002532788.1| protein with unknown function [Ricinus communis]
gi|223527476|gb|EEF29607.1| protein with unknown
function [Ricinus communis]
Length = 251
Score = 107 bits (267), Expect = 2e-21
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = -3
Query: 193 SFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKLTIWD 14
S+DYSFKILLIGDSGVGKSS+LLSFIS DLSPTIGVDFK+KML+ GGKRLKLTIWD
Sbjct: 3 SYDYSFKILLIGDSGVGKSSILLSFISNSV-HDLSPTIGVDFKIKMLSAGGKRLKLTIWD 61
Query: 13 TAGQ 2
TAGQ
Sbjct: 62 TAGQ 65
>ref|NP_568121.1| ras-related protein RABC2a [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
Full=Ras-related protein RABC2a; Short=AtRABC2a;
AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein
[Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
thaliana] gi|297318937|gb|EFH49359.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| ras-related protein RABC2a
[Arabidopsis thaliana]
Length = 210
Score = 106 bits (265), Expect = 3e-21
Identities = 55/72 (76%), Positives = 60/72 (83%)
Frame = -3
Query: 217 MGSRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGK 38
MGS +D SFKILLIGDSGVGKSSLL+SFIS +DL+PTIGVDFK+K LTVGGK
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSV-EDLAPTIGVDFKIKQLTVGGK 59
Query: 37 RLKLTIWDTAGQ 2
RLKLTIWDTAGQ
Sbjct: 60 RLKLTIWDTAGQ 71
>gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 106 bits (265), Expect = 3e-21
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = -3
Query: 187 DYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKLTIWDTA 8
D SFKILLIGDSGVGKS LL++FIS + +DLSPTIGVDFK+KMLTVGGKRLKLTIWDTA
Sbjct: 14 DLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTA 73
Query: 7 GQ 2
GQ
Sbjct: 74 GQ 75
>ref|XP_004249661.1| PREDICTED: ras-related protein RABC2a-like [Solanum lycopersicum]
Length = 209
Score = 106 bits (264), Expect = 4e-21
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = -3
Query: 205 KNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKL 26
+N S+D SFKILLIGDSGVGKSSLLLSFIS A D++PTIGVDFK+K LTVGGKRLKL
Sbjct: 2 QNSSSYDLSFKILLIGDSGVGKSSLLLSFISN-AVDDVTPTIGVDFKIKTLTVGGKRLKL 60
Query: 25 TIWDTAGQ 2
TIWDTAGQ
Sbjct: 61 TIWDTAGQ 68
>ref|XP_006398804.1| hypothetical protein EUTSA_v10014668mg [Eutrema salsugineum]
gi|567169919|ref|XP_006398805.1| hypothetical protein
EUTSA_v10014668mg [Eutrema salsugineum]
gi|557099894|gb|ESQ40257.1| hypothetical protein
EUTSA_v10014668mg [Eutrema salsugineum]
gi|557099895|gb|ESQ40258.1| hypothetical protein
EUTSA_v10014668mg [Eutrema salsugineum]
Length = 211
Score = 105 bits (263), Expect = 5e-21
Identities = 54/72 (75%), Positives = 60/72 (83%)
Frame = -3
Query: 217 MGSRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGK 38
MGS +D SFKILLIGDSGVGKSSLL+SFIS +D++PTIGVDFK+K LTVGGK
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSV-EDIAPTIGVDFKIKQLTVGGK 59
Query: 37 RLKLTIWDTAGQ 2
RLKLTIWDTAGQ
Sbjct: 60 RLKLTIWDTAGQ 71
>ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 105 bits (263), Expect = 5e-21
Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = -3
Query: 211 SRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQ-AFQDLSPTIGVDFKLKMLTVGGKR 35
SR ++DYSFK+LL+GDSGVGKSSLLLSFIS + LSPTIGVDFK+K+ TVGGKR
Sbjct: 5 SRVGSSNYDYSFKVLLVGDSGVGKSSLLLSFISNSNSINHLSPTIGVDFKIKLFTVGGKR 64
Query: 34 LKLTIWDTAGQ 2
LKLTIWDTAGQ
Sbjct: 65 LKLTIWDTAGQ 75
>ref|XP_006847234.1| hypothetical protein AMTR_s00017p00258370 [Amborella trichopoda]
gi|548850263|gb|ERN08815.1| hypothetical protein
AMTR_s00017p00258370 [Amborella trichopoda]
Length = 208
Score = 105 bits (261), Expect = 8e-21
Identities = 53/63 (84%), Positives = 56/63 (88%)
Frame = -3
Query: 190 FDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRLKLTIWDT 11
FDY FK+LLIGDSGVGKSSLLLSF S F DLSPTIGVDFK+KMLT+GGKRLKL IWDT
Sbjct: 10 FDYLFKLLLIGDSGVGKSSLLLSFTSD-TFDDLSPTIGVDFKIKMLTLGGKRLKLAIWDT 68
Query: 10 AGQ 2
AGQ
Sbjct: 69 AGQ 71
>ref|XP_002322909.1| hypothetical protein POPTR_0016s10830g [Populus trichocarpa]
gi|222867539|gb|EEF04670.1| hypothetical protein
POPTR_0016s10830g [Populus trichocarpa]
Length = 208
Score = 105 bits (261), Expect = 8e-21
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = -3
Query: 217 MGSRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGK 38
MGS S+D SFKILLIGDSGVGKSSLL+SFIS +DL+PTIGVDFK+K LTVGGK
Sbjct: 1 MGSSSG--SYDLSFKILLIGDSGVGKSSLLVSFISSSV-EDLAPTIGVDFKIKQLTVGGK 57
Query: 37 RLKLTIWDTAGQ 2
RLKLTIWDTAGQ
Sbjct: 58 RLKLTIWDTAGQ 69
>ref|XP_004515929.1| PREDICTED: ras-related protein RABC2a-like [Cicer arietinum]
Length = 247
Score = 104 bits (260), Expect = 1e-20
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = -3
Query: 211 SRKNCVSFDYSFKILLIGDSGVGKSSLLLSFISQQAFQDLSPTIGVDFKLKMLTVGGKRL 32
S ++ S+D SFKILLIGDS VGKSSL+LSFIS +DLSPTIGVDFK+K+LTVGGKRL
Sbjct: 40 SGQSSSSYDLSFKILLIGDSAVGKSSLILSFISASV-EDLSPTIGVDFKIKLLTVGGKRL 98
Query: 31 KLTIWDTAGQ 2
KLTIWDTAGQ
Sbjct: 99 KLTIWDTAGQ 108