BLASTX nr result
ID: Catharanthus23_contig00031448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031448
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344853.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006382364.1| hypothetical protein POPTR_0005s01450g, part... 103 2e-20
ref|XP_002330073.1| predicted protein [Populus trichocarpa] 103 2e-20
emb|CBI39619.3| unnamed protein product [Vitis vinifera] 100 2e-19
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006472234.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006433563.1| hypothetical protein CICLE_v10000386mg [Citr... 100 2e-19
ref|XP_004500093.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
gb|EMJ08751.1| hypothetical protein PRUPE_ppa017672mg [Prunus pe... 99 4e-19
gb|EXC31178.1| hypothetical protein L484_004944 [Morus notabilis] 98 1e-18
gb|ESW09374.1| hypothetical protein PHAVU_009G122500g [Phaseolus... 97 3e-18
ref|XP_004304908.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
emb|CBI32034.3| unnamed protein product [Vitis vinifera] 96 4e-18
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat... 96 5e-18
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ... 96 6e-18
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 95 1e-17
ref|XP_006483265.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
>ref|XP_006344853.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 745
Score = 103 bits (258), Expect = 2e-20
Identities = 46/57 (80%), Positives = 49/57 (85%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
A PP PIRI+KNLRIC DCH AAKLIS AF REIV+RDRHRFHHFKDGSCSCM +W
Sbjct: 689 AIAPPTPIRIIKNLRICSDCHAAAKLISKAFDREIVVRDRHRFHHFKDGSCSCMEFW 745
>ref|XP_006382364.1| hypothetical protein POPTR_0005s01450g, partial [Populus
trichocarpa] gi|550337723|gb|ERP60161.1| hypothetical
protein POPTR_0005s01450g, partial [Populus trichocarpa]
Length = 788
Score = 103 bits (258), Expect = 2e-20
Identities = 46/57 (80%), Positives = 48/57 (84%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
A PP PIRI+KNLRIC DCH AAKLIS AF REIV+RDRHRFHHFK GSCSCM YW
Sbjct: 732 AIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 788
>ref|XP_002330073.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 103 bits (258), Expect = 2e-20
Identities = 46/57 (80%), Positives = 48/57 (84%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
A PP PIRI+KNLRIC DCH AAKLIS AF REIV+RDRHRFHHFK GSCSCM YW
Sbjct: 737 AIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 100 bits (250), Expect = 2e-19
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
PP PIRIMKNLRIC DCH AAKLIS A+ REIV+RDRHRFH+FK+G+CSCM YW
Sbjct: 587 PPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 100 bits (250), Expect = 2e-19
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
PP PIRIMKNLRIC DCH AAKLIS A+ REIV+RDRHRFH+FK+G+CSCM YW
Sbjct: 755 PPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
>ref|XP_006472234.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Citrus sinensis]
Length = 798
Score = 100 bits (249), Expect = 2e-19
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
PP PIRIMKNLRIC DCH AAK IS AF REIV+RDRHRFHHFK GSCSCM +W
Sbjct: 745 PPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 798
>ref|XP_006433563.1| hypothetical protein CICLE_v10000386mg [Citrus clementina]
gi|557535685|gb|ESR46803.1| hypothetical protein
CICLE_v10000386mg [Citrus clementina]
Length = 746
Score = 100 bits (249), Expect = 2e-19
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
PP PIRIMKNLRIC DCH AAK IS AF REIV+RDRHRFHHFK GSCSCM +W
Sbjct: 693 PPNPIRIMKNLRICNDCHTAAKFISRAFDREIVVRDRHRFHHFKHGSCSCMDFW 746
>ref|XP_004500093.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502128825|ref|XP_004500094.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 785
Score = 99.8 bits (247), Expect = 3e-19
Identities = 44/54 (81%), Positives = 45/54 (83%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
PP PIRIMKNLRIC DCH KLIS AF REIVIRDRHRFHHFK GSCSCM +W
Sbjct: 732 PPAPIRIMKNLRICNDCHTVVKLISKAFDREIVIRDRHRFHHFKHGSCSCMDFW 785
>gb|EMJ08751.1| hypothetical protein PRUPE_ppa017672mg [Prunus persica]
Length = 745
Score = 99.4 bits (246), Expect = 4e-19
Identities = 43/56 (76%), Positives = 46/56 (82%)
Frame = -2
Query: 416 TKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
T PP PIRI+KNLRIC DCH AAK IS AF R+IV+RDRHRFHHFK GSCSC YW
Sbjct: 690 TSPPTPIRIIKNLRICNDCHMAAKFISKAFNRDIVLRDRHRFHHFKQGSCSCKDYW 745
>gb|EXC31178.1| hypothetical protein L484_004944 [Morus notabilis]
Length = 745
Score = 98.2 bits (243), Expect = 1e-18
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
+T PP PIRIMKNLRIC DCH AAK IS A+ R IV+RDRHRFHHF GSCSC+ YW
Sbjct: 689 STSPPTPIRIMKNLRICNDCHNAAKFISKAYDRVIVVRDRHRFHHFDQGSCSCLDYW 745
>gb|ESW09374.1| hypothetical protein PHAVU_009G122500g [Phaseolus vulgaris]
Length = 774
Score = 96.7 bits (239), Expect = 3e-18
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
PP PIR+MKNLRIC DCH KLIS AF REIV+RDRHRFHHF+ G+CSCM +W
Sbjct: 721 PPTPIRVMKNLRICNDCHTVVKLISKAFDREIVVRDRHRFHHFRHGACSCMDFW 774
>ref|XP_004304908.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Fragaria vesca subsp. vesca]
Length = 777
Score = 96.7 bits (239), Expect = 3e-18
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
A PP PIRI+KNLRIC DCH AAK +S AF R+IV+RD+HRFHHFK GSCSC YW
Sbjct: 721 AISPPSPIRIIKNLRICNDCHMAAKFVSKAFGRDIVVRDKHRFHHFKQGSCSCNDYW 777
>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 96.7 bits (239), Expect = 3e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
A+ MPIRI+KNLR+CGDCH KLIS A+ R+I++RDR+RFHHFKDGSCSC+ YW
Sbjct: 535 ASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2
Query: 416 TKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
TKP MPIRI KNLR+C +CH+ KLIS F REI++RDR RFHHFKDG+CSCM YW
Sbjct: 538 TKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 593
>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2
Query: 416 TKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
TKP MPIRI KNLR+C +CH+ KLIS F REI++RDR RFHHFKDG+CSCM YW
Sbjct: 552 TKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 607
>ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 95.9 bits (237), Expect = 5e-18
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -2
Query: 410 PPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
P +PIRI+KNLR+C DCH+A K+IS AF REIV+RDR+RFHHF+DG CSC GYW
Sbjct: 562 PDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 740
Score = 95.5 bits (236), Expect = 6e-18
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
A+ + IRI+KNLR+CGDCH KLIS+A++REI++RDR+RFHHFKDGSCSC+ YW
Sbjct: 684 ASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 95.5 bits (236), Expect = 6e-18
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
+TKP IRI+KNLR+CG+CH A KLIS F REI+ RDR+RFHHFKDGSCSCM YW
Sbjct: 682 STKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = -2
Query: 419 ATKPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
+TKP IRIMKNLR+CG+CH A KLIS F REI+ RDR+RFHHFKDGSCSC YW
Sbjct: 680 STKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
>ref|XP_006483265.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Citrus sinensis]
Length = 614
Score = 94.4 bits (233), Expect = 1e-17
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -2
Query: 413 KPPMPIRIMKNLRICGDCHEAAKLISIAFYREIVIRDRHRFHHFKDGSCSCMGYW 249
KP MPIR+ KNLR+C DCHE KLIS F EI++RDR RFHHFKDGSCSCM YW
Sbjct: 560 KPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614