BLASTX nr result

ID: Catharanthus23_contig00031368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00031368
         (506 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515358.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297...    56   6e-06
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...    55   7e-06
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   7e-06
ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [S...    55   7e-06
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [...    55   1e-05

>ref|XP_002515358.1| conserved hypothetical protein [Ricinus communis]
           gi|223545302|gb|EEF46807.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/79 (39%), Positives = 44/79 (55%)
 Frame = -2

Query: 496 QIRQVEDNSRCTFHTQTRDDRQHQLHLQYLYHKEEKYWASRSHVSWLAYGDLNASYFHHH 317
           Q+ QV++ S     T   + R  +  LQ+   +EEK+WA + H SW+  G+ N  YFH  
Sbjct: 9   QLSQVKEASG---GTDCNNIRAIENMLQHAIVQEEKFWAQKGHQSWIRLGENNTGYFHAV 65

Query: 316 VSQRHRRNTISQLIDCNTM 260
           VSQR R N I  L+D N +
Sbjct: 66  VSQRRRNNQIRGLLDYNCL 84


>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
           subsp. vesca]
          Length = 1096

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/73 (35%), Positives = 42/73 (57%)
 Frame = -2

Query: 496 QIRQVEDNSRCTFHTQTRDDRQHQLHLQYLYHKEEKYWASRSHVSWLAYGDLNASYFHHH 317
           ++ ++ +  + +F  + R + + QL  + L  KE+ +W  RS V WLA GDLN  YFH  
Sbjct: 93  RLGELYEEGQPSFSDEVRGELEKQL--RELLQKEQAFWQQRSRVLWLAEGDLNTKYFHQK 150

Query: 316 VSQRHRRNTISQL 278
            S R ++NT+  L
Sbjct: 151 ASNRRKKNTLRGL 163


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 1152

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = -2

Query: 418 LQYLYHKEEKYWASRSHVSWLAYGDLNASYFHHHVSQRHRRNTISQLID 272
           LQ L HK++ +W  RS V WLA GDLN  +FH   S R ++NT+  L +
Sbjct: 109 LQDLLHKKQTFWQQRSRVLWLAEGDLNTKFFHQRASNRKKKNTLKGLFN 157


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -2

Query: 418 LQYLYHKEEKYWASRSHVSWLAYGDLNASYFHHHVSQRHRRNTISQLIDCN 266
           L  ++  EE YW +R+  + +  GD N  YFHH  SQR RRNTI++L+D N
Sbjct: 328 LDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDEN 378


>ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [Sorghum bicolor]
           gi|241929646|gb|EES02791.1| hypothetical protein
           SORBIDRAFT_03g011415 [Sorghum bicolor]
          Length = 335

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/64 (35%), Positives = 38/64 (59%)
 Frame = -2

Query: 448 TRDDRQHQLHLQYLYHKEEKYWASRSHVSWLAYGDLNASYFHHHVSQRHRRNTISQLIDC 269
           T   ++  + L+ +  +EE +W  RS  +WL  GD N S+FH+  ++R ++NTI  L+D 
Sbjct: 43  TESQKEIMVRLELMLEQEEIHWFQRSRANWLRQGDRNTSFFHNFATKRRKKNTIKGLMDE 102

Query: 268 NTMR 257
           N  R
Sbjct: 103 NGQR 106


>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
          Length = 1367

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = -2

Query: 505 LPNQIRQVED------NSRCTFHT-QTRDDRQHQLHLQYLYHKEEKYWASRSHVSWLAYG 347
           LPNQI+  ++      ++  + HT + R+    QL    L  K E YW  RS  +WL  G
Sbjct: 565 LPNQIKITQEKLGELLDAPPSHHTVELRNVLTKQL--DSLMAKNEVYWRQRSRATWLKAG 622

Query: 346 DLNASYFHHHVSQRHRRNTISQLID 272
           D N+ +FH+  S R RRNTIS L D
Sbjct: 623 DRNSKFFHYKASSRRRRNTISALED 647


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