BLASTX nr result
ID: Catharanthus23_contig00031355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031355
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat... 155 7e-36
ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat... 155 7e-36
ref|XP_004310131.1| PREDICTED: putative pentatricopeptide repeat... 154 1e-35
gb|ESW25117.1| hypothetical protein PHAVU_003G008700g [Phaseolus... 152 6e-35
gb|EMJ27928.1| hypothetical protein PRUPE_ppa019364mg, partial [... 152 6e-35
ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat... 151 1e-34
emb|CBI38188.3| unnamed protein product [Vitis vinifera] 151 1e-34
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera] 151 1e-34
ref|XP_003529187.2| PREDICTED: putative pentatricopeptide repeat... 146 2e-33
gb|EXC25511.1| hypothetical protein L484_009819 [Morus notabilis] 141 8e-32
ref|XP_002304652.2| pentatricopeptide repeat-containing family p... 139 4e-31
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 139 5e-31
gb|EOX99670.1| Tetratricopeptide repeat-like superfamily protein... 136 3e-30
gb|EMT27574.1| hypothetical protein F775_17737 [Aegilops tauschii] 135 4e-30
gb|EMT23944.1| hypothetical protein F775_16829 [Aegilops tauschii] 135 4e-30
ref|XP_006438846.1| hypothetical protein CICLE_v10033965mg [Citr... 135 6e-30
ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat... 135 6e-30
ref|XP_006483017.1| PREDICTED: putative pentatricopeptide repeat... 135 7e-30
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ... 135 7e-30
ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat... 133 2e-29
>ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Solanum tuberosum]
Length = 830
Score = 155 bits (391), Expect = 7e-36
Identities = 72/102 (70%), Positives = 85/102 (83%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPDIKLIHGMLEW +K G++P+ V+LLDV++DEK RLLW HSER+AL
Sbjct: 709 YFSVGDASHPDIKLIHGMLEWFNLKSKGGGYVPNSDVVLLDVDDDEKIRLLWLHSERLAL 768
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AFAL+ TP GSPI I+KNLRICLDCHA IKFIS ++REIVI
Sbjct: 769 AFALLRTPPGSPIRIIKNLRICLDCHAAIKFISTLVQREIVI 810
>ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Solanum lycopersicum]
Length = 829
Score = 155 bits (391), Expect = 7e-36
Identities = 73/102 (71%), Positives = 85/102 (83%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPDIKLIHGMLEWL +K G++P+ VILLDV++DEK RLLW HSER+AL
Sbjct: 708 YFSVGDASHPDIKLIHGMLEWLNLKSKGGGYVPNSDVILLDVDDDEKIRLLWLHSERLAL 767
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AFAL+ P GSPI I+KNLRICLDCHA IKFIS ++REIVI
Sbjct: 768 AFALVRMPPGSPIRIIKNLRICLDCHAAIKFISTLVQREIVI 809
>ref|XP_004310131.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 733
Score = 154 bits (389), Expect = 1e-35
Identities = 69/102 (67%), Positives = 89/102 (87%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YFTVGD+SHPD++LI+GMLEWLKM+ AGH+P+ +V++LDVE+DEK RLLW HSER+AL
Sbjct: 612 YFTVGDISHPDMRLINGMLEWLKMRILKAGHVPNCNVVMLDVEDDEKERLLWVHSERLAL 671
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AFAL+ TPSGS I I+KNLRIC+DCHA +K IS ++REI++
Sbjct: 672 AFALVRTPSGSLIRIIKNLRICVDCHATVKLISKVVQREIIV 713
>gb|ESW25117.1| hypothetical protein PHAVU_003G008700g [Phaseolus vulgaris]
Length = 806
Score = 152 bits (383), Expect = 6e-35
Identities = 73/102 (71%), Positives = 83/102 (81%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YFTVGD SHPDIKLIH MLEWL K AG++PD SV+LL+VE+DEK LLWAHSER+AL
Sbjct: 685 YFTVGDTSHPDIKLIHAMLEWLNKKSREAGYVPDCSVVLLNVEDDEKQSLLWAHSERLAL 744
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AF LI TP S I I+KNLRIC+DCH VIKFIS ++REIVI
Sbjct: 745 AFGLIHTPPASSIRIIKNLRICVDCHTVIKFISKIVQREIVI 786
>gb|EMJ27928.1| hypothetical protein PRUPE_ppa019364mg, partial [Prunus persica]
Length = 824
Score = 152 bits (383), Expect = 6e-35
Identities = 69/102 (67%), Positives = 85/102 (83%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPD+KLI+GMLEWLKM+ AGH+P+YS +LLDVE+DEK R LW HSER+AL
Sbjct: 703 YFSVGDTSHPDMKLINGMLEWLKMRTLKAGHVPNYSAVLLDVEDDEKERFLWVHSERLAL 762
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AF LI T GSPI I+KNLRIC+DCHA +K IS ++R+IV+
Sbjct: 763 AFGLIRTSPGSPIRIIKNLRICVDCHATVKLISKVVQRDIVV 804
>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 151 bits (381), Expect = 1e-34
Identities = 69/101 (68%), Positives = 87/101 (86%)
Frame = -2
Query: 305 FTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIALA 126
FTVGD SHP++++I+GMLEWL MK AG+IP+Y+V+LLDVE++EK RLLW HSER+AL+
Sbjct: 491 FTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALS 550
Query: 125 FALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
F +I TPSGSPI IMKNLRIC+DCHA IK IS ++REIV+
Sbjct: 551 FGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVV 591
>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 151 bits (381), Expect = 1e-34
Identities = 69/101 (68%), Positives = 87/101 (86%)
Frame = -2
Query: 305 FTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIALA 126
FTVGD SHP++++I+GMLEWL MK AG+IP+Y+V+LLDVE++EK RLLW HSER+AL+
Sbjct: 624 FTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALS 683
Query: 125 FALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
F +I TPSGSPI IMKNLRIC+DCHA IK IS ++REIV+
Sbjct: 684 FGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVV 724
>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 151 bits (381), Expect = 1e-34
Identities = 69/101 (68%), Positives = 87/101 (86%)
Frame = -2
Query: 305 FTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIALA 126
FTVGD SHP++++I+GMLEWL MK AG+IP+Y+V+LLDVE++EK RLLW HSER+AL+
Sbjct: 667 FTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALS 726
Query: 125 FALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
F +I TPSGSPI IMKNLRIC+DCHA IK IS ++REIV+
Sbjct: 727 FGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVV 767
>ref|XP_003529187.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 822
Score = 146 bits (369), Expect = 2e-33
Identities = 71/102 (69%), Positives = 82/102 (80%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YFTVGD SHP+IKLI MLEWL K AG++PD SV+LLDVE+DEK RLLW HSER+AL
Sbjct: 701 YFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLAL 760
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AF LI PSG I I+KNLRIC+DCHAVIK +S ++REIVI
Sbjct: 761 AFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVI 802
>gb|EXC25511.1| hypothetical protein L484_009819 [Morus notabilis]
Length = 833
Score = 141 bits (356), Expect = 8e-32
Identities = 66/102 (64%), Positives = 81/102 (79%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF VGD SHPD+KLI GMLEWL MK AG +P+ SV++ VE+ E+ RLLW HSER+AL
Sbjct: 712 YFIVGDTSHPDMKLISGMLEWLNMKTRRAGFVPNCSVVMRQVEDGERKRLLWLHSERLAL 771
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AF LI TPSGS I I+KNLRIC+DCHA +KF+S +KR+I+I
Sbjct: 772 AFGLIRTPSGSQIRIIKNLRICVDCHAAMKFVSKIVKRDILI 813
>ref|XP_002304652.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550343311|gb|EEE79631.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 820
Score = 139 bits (350), Expect = 4e-31
Identities = 64/102 (62%), Positives = 81/102 (79%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPD KLI+GMLEWL MK G++PD+S +LLDVE+ +K + LW HSER+AL
Sbjct: 699 YFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLAL 758
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
A+ LI TPS SP+ I+KNLRIC DCHA IK IS ++R+I+I
Sbjct: 759 AYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIII 800
>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 716
Score = 139 bits (349), Expect = 5e-31
Identities = 64/102 (62%), Positives = 79/102 (77%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPD+K+I GMLEWL MK AG++PD + +L DVE+DEK R LW HSER+AL
Sbjct: 595 YFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLAL 654
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AF LI TPS I I+KNLRIC DCH+ IK IS ++R+I+I
Sbjct: 655 AFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIII 696
>gb|EOX99670.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 833
Score = 136 bits (343), Expect = 3e-30
Identities = 62/102 (60%), Positives = 80/102 (78%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPD+K+I+G+LEWL M+ AG +P+ +LLDVE+ EK LLW HSER+AL
Sbjct: 712 YFSVGDTSHPDMKVINGILEWLNMRTRRAGFVPNCHAVLLDVEDKEKEHLLWVHSERLAL 771
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AFA+ TPSGS I I+KNLRIC+DCHA +K IS ++R I+I
Sbjct: 772 AFAMFRTPSGSQIRIIKNLRICVDCHAAMKLISKIVQRNIII 813
>gb|EMT27574.1| hypothetical protein F775_17737 [Aegilops tauschii]
Length = 611
Score = 135 bits (341), Expect = 4e-30
Identities = 59/101 (58%), Positives = 80/101 (79%)
Frame = -2
Query: 305 FTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIALA 126
F+VG HPD+++IH MLEWL +K H AG++PD +V+L DV+E++K R+LW HSER+ALA
Sbjct: 491 FSVGLEDHPDMRVIHAMLEWLNLKTHRAGYVPDTNVVLHDVDEEQKARMLWVHSERLALA 550
Query: 125 FALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
+ L+ TP G PI IMKNLR CLDCHA+ K IS +K+EI++
Sbjct: 551 YGLVMTPPGHPIHIMKNLRSCLDCHAIFKVISKIVKQEIIV 591
>gb|EMT23944.1| hypothetical protein F775_16829 [Aegilops tauschii]
Length = 797
Score = 135 bits (341), Expect = 4e-30
Identities = 59/101 (58%), Positives = 80/101 (79%)
Frame = -2
Query: 305 FTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIALA 126
F+VG HPD+++IH MLEWL +K H AG++PD +V+L DV+E++K R+LW HSER+ALA
Sbjct: 543 FSVGLEDHPDMRVIHAMLEWLNLKTHRAGYVPDTNVVLHDVDEEQKARMLWVHSERLALA 602
Query: 125 FALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
+ L+ TP G PI IMKNLR CLDCHA+ K IS +K+EI++
Sbjct: 603 YGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIV 643
>ref|XP_006438846.1| hypothetical protein CICLE_v10033965mg [Citrus clementina]
gi|557541042|gb|ESR52086.1| hypothetical protein
CICLE_v10033965mg [Citrus clementina]
Length = 832
Score = 135 bits (340), Expect = 6e-30
Identities = 63/102 (61%), Positives = 75/102 (73%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF GD SH D+ +I GMLEWL MK AG+IPD S +L DV+EDEK R LW HSE++AL
Sbjct: 711 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVKEDEKERYLWVHSEKLAL 770
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AFAL P SPI I+KNLRIC+DCH IK IS ++REI+I
Sbjct: 771 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 812
>ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cicer arietinum]
Length = 813
Score = 135 bits (340), Expect = 6e-30
Identities = 66/102 (64%), Positives = 77/102 (75%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF VGD SHPDIKLI MLEWL K AG+ PD + +LLDV++DEK R LW HSER+AL
Sbjct: 692 YFAVGDTSHPDIKLICAMLEWLNKKTREAGYDPDCNAVLLDVQDDEKERRLWVHSERLAL 751
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
A+ LI TP I I+KNLRIC+DCHAVIK IS ++REIVI
Sbjct: 752 AYGLIRTPVACSIRIIKNLRICVDCHAVIKLISKVVQREIVI 793
>ref|XP_006483017.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like isoform X1 [Citrus
sinensis] gi|568858974|ref|XP_006483018.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like isoform X2 [Citrus
sinensis]
Length = 832
Score = 135 bits (339), Expect = 7e-30
Identities = 63/102 (61%), Positives = 74/102 (72%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF GD SH D+ +I GMLEWL MK AG+IPD S +L DV EDEK R LW HSE++AL
Sbjct: 711 YFRAGDTSHADMNIIRGMLEWLNMKSRKAGYIPDLSAVLRDVREDEKERYLWVHSEKLAL 770
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
AFAL P SPI I+KNLRIC+DCH IK IS ++REI+I
Sbjct: 771 AFALFKMPPSSPIRIIKNLRICVDCHTAIKIISKIVQREIII 812
>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 811
Score = 135 bits (339), Expect = 7e-30
Identities = 64/102 (62%), Positives = 78/102 (76%)
Frame = -2
Query: 308 YFTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIAL 129
YF+VGD SHPDIKLI MLEWL K AG++PD + +LLDV++DEK R LW HSER+AL
Sbjct: 690 YFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLAL 749
Query: 128 AFALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
A+ LI TP I I+KNLRIC+DCH V+K IS ++REIVI
Sbjct: 750 AYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVI 791
>ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g13230,
mitochondrial-like [Cucumis sativus]
Length = 721
Score = 133 bits (335), Expect = 2e-29
Identities = 62/101 (61%), Positives = 79/101 (78%)
Frame = -2
Query: 305 FTVGDVSHPDIKLIHGMLEWLKMKCHAAGHIPDYSVILLDVEEDEKPRLLWAHSERIALA 126
FTV D SH D+KLI+GMLE+L MK AG+ P + +LLDVE+DEK RLLW HSER+ALA
Sbjct: 601 FTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALA 660
Query: 125 FALIGTPSGSPICIMKNLRICLDCHAVIKFISGFMKREIVI 3
F L+ P+G PI I+KNLRIC+DCH+VIK IS + R+I++
Sbjct: 661 FGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIV 701