BLASTX nr result
ID: Catharanthus23_contig00031240
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031240
(383 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC10650.1| hypothetical protein L484_025231 [Morus notabilis] 100 2e-19
gb|EMJ08021.1| hypothetical protein PRUPE_ppa025990mg [Prunus pe... 100 2e-19
ref|XP_002314181.2| hypothetical protein POPTR_0009s03620g [Popu... 99 6e-19
emb|CBI16134.3| unnamed protein product [Vitis vinifera] 99 6e-19
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
gb|EOY18767.1| Tetratricopeptide repeat (TPR)-like superfamily p... 98 1e-18
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,... 96 4e-18
gb|EPS72087.1| hypothetical protein M569_02669, partial [Genlise... 95 8e-18
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006488325.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006424825.1| hypothetical protein CICLE_v10028134mg [Citr... 94 2e-17
ref|XP_006347407.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_004241523.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
ref|XP_006417788.1| hypothetical protein EUTSA_v10007326mg [Eutr... 90 3e-16
ref|XP_006307211.1| hypothetical protein CARUB_v10008810mg [Caps... 90 3e-16
ref|NP_172238.1| pentatricopeptide repeat-containing protein [Ar... 90 4e-16
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_002892408.1| pentatricopeptide repeat-containing protein ... 89 5e-16
ref|XP_004487242.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006856374.1| hypothetical protein AMTR_s00047p00194260 [A... 87 3e-15
>gb|EXC10650.1| hypothetical protein L484_025231 [Morus notabilis]
Length = 524
Score = 100 bits (250), Expect = 2e-19
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -1
Query: 173 LSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
LS+RIEKL +GE+V SAFQ+WMGDGFPV RGD+FH INRLRKLK NKRALEVMEWVI
Sbjct: 58 LSYRIEKLPKGEAVLSAFQNWMGDGFPVHRGDIFHAINRLRKLKMNKRALEVMEWVI 114
>gb|EMJ08021.1| hypothetical protein PRUPE_ppa025990mg [Prunus persica]
Length = 528
Score = 100 bits (249), Expect = 2e-19
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = -1
Query: 173 LSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
LS+RIEKL GE V SAFQSWMGDGFP+ RGD+FH INRLRKLK NKRALEVMEWVI
Sbjct: 62 LSYRIEKLPNGEPVGSAFQSWMGDGFPIHRGDIFHAINRLRKLKLNKRALEVMEWVI 118
>ref|XP_002314181.2| hypothetical protein POPTR_0009s03620g [Populus trichocarpa]
gi|550330961|gb|EEE88136.2| hypothetical protein
POPTR_0009s03620g [Populus trichocarpa]
Length = 525
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIEKL RGESV AFQSWMG+GFP+ RGDVFH INRLRKL+ NKRALEVMEWV+
Sbjct: 57 KCLSSRIEKLPRGESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVV 115
>emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = -1
Query: 185 QAKTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWV 6
++K+LSWRIEKL RGE V AFQSWMG+G P+ RG +FH INRLRKLK NKRALEVMEWV
Sbjct: 56 ESKSLSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWV 115
Query: 5 I 3
+
Sbjct: 116 V 116
>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = -1
Query: 185 QAKTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWV 6
++K+LSWRIEKL RGE V AFQSWMG+G P+ RG +FH INRLRKLK NKRALEVMEWV
Sbjct: 80 ESKSLSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWV 139
Query: 5 I 3
+
Sbjct: 140 V 140
>gb|EOY18767.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 519
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/61 (75%), Positives = 52/61 (85%)
Frame = -1
Query: 185 QAKTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWV 6
+ K LS RIE+L +GE+V SAF+SWM DGFPV RGD+FH INRLRKLK NKRALEVMEWV
Sbjct: 49 EPKCLSLRIERLPKGETVGSAFKSWMADGFPVHRGDIFHAINRLRKLKLNKRALEVMEWV 108
Query: 5 I 3
I
Sbjct: 109 I 109
>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 521
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K+LS RIEKL RGE + AFQSWM +GFP+ RGDVFH INRLRKLK NKRALEVMEWVI
Sbjct: 53 KSLSLRIEKLPRGEPIGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVI 111
>gb|EPS72087.1| hypothetical protein M569_02669, partial [Genlisea aurea]
Length = 467
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = -1
Query: 173 LSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
LS RIE++ RGESVASAF+SWMGDGFPV RGD+FH +NRLR+LK+ +RALEVMEWV+
Sbjct: 7 LSRRIEQVPRGESVASAFRSWMGDGFPVQRGDIFHTVNRLRRLKSTRRALEVMEWVL 63
>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/61 (70%), Positives = 51/61 (83%)
Frame = -1
Query: 185 QAKTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWV 6
+ K LS RIE++ +GE V AF+SWMGDGFP+ RGD+FH INRLRKL+ NKRALEVMEWV
Sbjct: 56 EPKCLSLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWV 115
Query: 5 I 3
I
Sbjct: 116 I 116
>ref|XP_006488325.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Citrus sinensis]
Length = 521
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIE+L RGE V SAFQSWM +GFPV RG++FH INRLRKL+ NKRALEVMEWVI
Sbjct: 52 KCLSLRIERLPRGEPVGSAFQSWMREGFPVHRGEIFHSINRLRKLQLNKRALEVMEWVI 110
>ref|XP_006424825.1| hypothetical protein CICLE_v10028134mg [Citrus clementina]
gi|557526759|gb|ESR38065.1| hypothetical protein
CICLE_v10028134mg [Citrus clementina]
Length = 546
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIE+L RGE V SAFQSWM +GFPV RG++FH INRLRKL+ NKRALEVMEWVI
Sbjct: 77 KCLSLRIERLPRGEPVGSAFQSWMREGFPVHRGEIFHSINRLRKLQLNKRALEVMEWVI 135
>ref|XP_006347407.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 535
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = -1
Query: 173 LSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
LS RIE++ GES+ S FQSWMGDG P+ RGD+FH +NRLRKLK NKRALEVMEWVI
Sbjct: 69 LSQRIERVPIGESIGSTFQSWMGDGLPIHRGDIFHTMNRLRKLKLNKRALEVMEWVI 125
>ref|XP_004241523.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Solanum lycopersicum]
Length = 535
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = -1
Query: 176 TLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
+LS RIE + GES+ S FQSWMGDG P+ RGD+FH +NRLRKLK NKRALEVMEWVI
Sbjct: 68 SLSQRIESVPIGESIGSTFQSWMGDGLPIHRGDIFHTMNRLRKLKLNKRALEVMEWVI 125
>ref|XP_006417788.1| hypothetical protein EUTSA_v10007326mg [Eutrema salsugineum]
gi|557095559|gb|ESQ36141.1| hypothetical protein
EUTSA_v10007326mg [Eutrema salsugineum]
Length = 534
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIEKL +G +V SA QSWMGDGFPV GDV+H INRLRKL NKRALE+MEWVI
Sbjct: 66 KCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWVI 124
>ref|XP_006307211.1| hypothetical protein CARUB_v10008810mg [Capsella rubella]
gi|482575922|gb|EOA40109.1| hypothetical protein
CARUB_v10008810mg [Capsella rubella]
Length = 534
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIEKL +G +V SA QSWMGDGFPV GDV+H INRLRKL NKRALE+MEWVI
Sbjct: 66 KCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWVI 124
>ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2
[Arabidopsis thaliana] gi|332190025|gb|AEE28146.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 534
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIEKL +G +V SA QSWMGDGFPV GDV+H INRLRKL NKRALE+MEW+I
Sbjct: 66 KCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWII 124
>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = -1
Query: 176 TLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
+LS RIEKL +GESV SAF+SWM DG PV GD+FH INRLRKL NKRAL+VMEWVI
Sbjct: 40 SLSRRIEKLPKGESVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVI 97
>ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338250|gb|EFH68667.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K LS RIEKL +G +V SA QSWMGDGFPV GDV+H INRLRKL NKRALE+MEW+I
Sbjct: 68 KCLSVRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWII 126
>ref|XP_004487242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cicer arietinum]
Length = 512
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = -1
Query: 176 TLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
+L RIEKL +GES+ SAF+SWM DGFPV D+FH INRLRKL NKRALEVMEWVI
Sbjct: 45 SLCKRIEKLPKGESIGSAFRSWMRDGFPVRGADIFHTINRLRKLNFNKRALEVMEWVI 102
>ref|XP_006856374.1| hypothetical protein AMTR_s00047p00194260 [Amborella trichopoda]
gi|548860234|gb|ERN17841.1| hypothetical protein
AMTR_s00047p00194260 [Amborella trichopoda]
Length = 524
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = -1
Query: 179 KTLSWRIEKLARGESVASAFQSWMGDGFPVGRGDVFHIINRLRKLKANKRALEVMEWVI 3
K+L+ R+EKL R ES+ AFQS+M +GFPV RGDVFH INRLRKL+ KRALEVMEWVI
Sbjct: 56 KSLTSRVEKLERRESIVYAFQSYMSEGFPVQRGDVFHTINRLRKLRKYKRALEVMEWVI 114