BLASTX nr result
ID: Catharanthus23_contig00031210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031210
(312 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362840.1| PREDICTED: putative late blight resistance p... 64 2e-08
ref|XP_004252073.1| PREDICTED: putative late blight resistance p... 63 4e-08
ref|XP_004251396.1| PREDICTED: putative late blight resistance p... 62 6e-08
ref|XP_004248174.1| PREDICTED: putative late blight resistance p... 62 6e-08
gb|AET22503.1| hypothetical protein [Solanum lycopersicum] 62 6e-08
gb|AET22504.1| hypothetical protein [Solanum lycopersicum] gi|35... 62 8e-08
ref|XP_006364074.1| PREDICTED: putative late blight resistance p... 61 2e-07
ref|XP_004248476.1| PREDICTED: putative late blight resistance p... 61 2e-07
ref|XP_006367921.1| PREDICTED: putative late blight resistance p... 60 2e-07
ref|XP_006364072.1| PREDICTED: putative late blight resistance p... 60 2e-07
ref|XP_006345283.1| PREDICTED: uncharacterized protein LOC102590... 60 2e-07
ref|XP_004239116.1| PREDICTED: putative late blight resistance p... 59 5e-07
gb|AAC49408.1| PRF [Solanum lycopersicum] 59 5e-07
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum] 59 5e-07
gb|AAF76308.1| Prf [Solanum pimpinellifolium] 59 5e-07
ref|XP_006367931.1| PREDICTED: putative late blight resistance p... 59 7e-07
ref|XP_006367930.1| PREDICTED: putative late blight resistance p... 59 7e-07
ref|XP_006365678.1| PREDICTED: putative late blight resistance p... 59 7e-07
ref|XP_004251533.1| PREDICTED: putative late blight resistance p... 58 1e-06
ref|XP_006356447.1| PREDICTED: uncharacterized protein LOC102594... 57 3e-06
>ref|XP_006362840.1| PREDICTED: putative late blight resistance protein homolog
R1B-17-like [Solanum tuberosum]
Length = 876
Score = 63.9 bits (154), Expect = 2e-08
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 TLTLHFNLAIEKPR---KIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKV 173
TL L FNL + PR I W+ F N+KNLTL W L P LEVLKLK
Sbjct: 710 TLKLLFNLPMNNPRPRNSIQRWNAFPPNLKNLTLSCSFLLWEDARVLGNLPNLEVLKLKD 769
Query: 174 DACDGSEWEMGDTVFLRLRCLVLQGLSELIVW-HANPDNLP 293
+ G EWE + F RL+ L+++ +L+VW A+ D+ P
Sbjct: 770 FSFQGPEWETDEEGFHRLKYLLVES-RDLVVWKQASTDSYP 809
>ref|XP_004252073.1| PREDICTED: putative late blight resistance protein homolog
R1B-16-like [Solanum lycopersicum]
Length = 905
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = +3
Query: 39 PRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVF 218
P +P +F +K L LVG SW ++N + P LEVLKLK +AC G +W + F
Sbjct: 744 PVYVPSAIHFPTKLKKLKLVGTRLSWEELNIVGQWPNLEVLKLKPNACRGLKWHPIEGGF 803
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
RL+ L+++G + L W A D+ P+L L+
Sbjct: 804 PRLKFLLIEG-TNLTRWKATNDHFPALEHLV 833
>ref|XP_004251396.1| PREDICTED: putative late blight resistance protein homolog
R1A-10-like [Solanum lycopersicum]
Length = 869
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 TLTLHFNLAIEKP---RKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKV 173
TL L FNL ++ P I W+ F N+KNLTL W L P LEVLKLK
Sbjct: 703 TLKLLFNLPMKNPLPRNSIQRWNAFPPNLKNLTLSCSLLLWQDARVLGNLPNLEVLKLKY 762
Query: 174 DACDGSEWEMGDTVFLRLRCLVLQGLSELIVW-HANPDNLP 293
+ G EWE + F RL+ L+++ +L+VW A+ D+ P
Sbjct: 763 FSFQGPEWETDEEGFHRLKYLLVES-RDLVVWKQASTDSYP 802
>ref|XP_004248174.1| PREDICTED: putative late blight resistance protein homolog
R1B-12-like [Solanum lycopersicum]
Length = 889
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/92 (42%), Positives = 50/92 (54%)
Frame = +3
Query: 36 KPRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTV 215
KP + D F +K LTL G W+Q+ L M P LEVLKLK A GSEWE D
Sbjct: 736 KPWILKERDVFPPTLKKLTLRGCQLPWNQMTILCMLPELEVLKLKDYAFQGSEWESTDER 795
Query: 216 FLRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
F +L+ L+L G ++LI W + P L L+
Sbjct: 796 FQQLKFLLLDG-TDLIHWIVDSIQFPKLESLV 826
>gb|AET22503.1| hypothetical protein [Solanum lycopersicum]
Length = 888
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 TLTLHFNLAIEKP---RKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKV 173
TL L FNL ++ P I W+ F N+KNLTL W L P LEVLKLK
Sbjct: 722 TLKLLFNLPMKNPLPRNSIQRWNAFPPNLKNLTLSCSLLLWQDARVLGNLPNLEVLKLKY 781
Query: 174 DACDGSEWEMGDTVFLRLRCLVLQGLSELIVW-HANPDNLP 293
+ G EWE + F RL+ L+++ +L+VW A+ D+ P
Sbjct: 782 FSFQGPEWETDEEGFHRLKYLLVES-RDLVVWKQASTDSYP 821
>gb|AET22504.1| hypothetical protein [Solanum lycopersicum]
gi|356600308|gb|AET22505.1| hypothetical protein [Solanum
pimpinellifolium]
Length = 886
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 TLTLHFNLAIEKP---RKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKV 173
TL L FNL ++ P I W+ F N+KNLTL W L P LEVLKLK
Sbjct: 720 TLKLLFNLPMKNPLPHNSIQRWNAFPPNLKNLTLSCSLLLWQDARVLGNLPNLEVLKLKY 779
Query: 174 DACDGSEWEMGDTVFLRLRCLVLQGLSELIVW-HANPDNLP 293
+ G EWE + F RL+ L+++ +L++W A+ D+ P
Sbjct: 780 FSFQGPEWETDEEGFHRLKYLLVES-RDLVIWKQASTDSYP 819
>ref|XP_006364074.1| PREDICTED: putative late blight resistance protein homolog
R1A-4-like [Solanum tuberosum]
Length = 761
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +3
Query: 48 IPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGD---TVF 218
IP DNF N+K LTL H W +N L+ P LEVLKLK A G W++ D F
Sbjct: 604 IPHCDNFPPNLKKLTLCTTHLEWEDMNILSKLPNLEVLKLKDHAFRGHIWKLSDEDADGF 663
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
L+L+ L+L+ + L W A + PSL L+
Sbjct: 664 LKLKFLLLEHM-HLEQWEATSYHFPSLEHLV 693
>ref|XP_004248476.1| PREDICTED: putative late blight resistance protein homolog
R1B-12-like [Solanum lycopersicum]
Length = 879
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/84 (44%), Positives = 46/84 (54%)
Frame = +3
Query: 60 DNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVFLRLRCLV 239
D F +K LTL G W Q+ L P LEVLKLK A GSEWE D F +L+ L+
Sbjct: 724 DVFPPTLKKLTLRGCQLPWDQMTILCKLPKLEVLKLKHYAFQGSEWESTDERFQQLKFLL 783
Query: 240 LQGLSELIVWHANPDNLPSLSCLI 311
L G ++LI W A+ P L L+
Sbjct: 784 LDG-TDLIHWKASSIQFPKLENLV 806
>ref|XP_006367921.1| PREDICTED: putative late blight resistance protein homolog
R1A-10-like isoform X6 [Solanum tuberosum]
Length = 403
Score = 60.5 bits (145), Expect = 2e-07
Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +3
Query: 12 LHFNLAIEKPRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGS 191
L F IE IP DNF N+K LTL + W +N L P LEVLKLK A G
Sbjct: 242 LIFTPIIEGWMDIPHCDNFPPNLKKLTLCRTNLQWEDMNILRKLPNLEVLKLKDYAFRGL 301
Query: 192 EWEMGDT---VFLRLRCLVLQGLSELIVWHANPDNLPSL 299
W++ D FL+L+ L+L+ L L+ W A + PSL
Sbjct: 302 TWKLSDVDEDGFLKLKFLLLESL-HLMQWEATSYHFPSL 339
>ref|XP_006364072.1| PREDICTED: putative late blight resistance protein homolog
R1A-10-like [Solanum tuberosum]
Length = 584
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +3
Query: 48 IPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGD---TVF 218
IP DNF N+K LTL H W +N L P LEVLKLK A G W++ D F
Sbjct: 435 IPHCDNFPPNLKKLTLCRTHIQWEDMNILRKLPNLEVLKLKHHAFLGLIWKLSDEDEDGF 494
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
L+L+ L+L+ ++ L+ W A + P+L L+
Sbjct: 495 LKLKFLLLENMN-LMQWEATSYHFPNLEHLV 524
>ref|XP_006345283.1| PREDICTED: uncharacterized protein LOC102590501 [Solanum tuberosum]
Length = 2691
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 63 NFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVFLRLRCLVL 242
+F +K L LVG SW ++N + P LEVLKLK +AC G EW + F +L+ L++
Sbjct: 1731 HFPIKLKKLKLVGTCLSWEELNIIGQWPNLEVLKLKPNACHGLEWRPIEGRFPQLKFLLI 1790
Query: 243 QGLSELIVWHANPDNLPSLSCLI 311
+G + L W A D+ P+L L+
Sbjct: 1791 EG-TNLKCWKATNDHFPALEHLV 1812
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 63 NFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVFLRLRCLVL 242
+F +K L LVG SW ++N + P LEVLKLK +AC G EW + F +L+ L++
Sbjct: 2538 HFPIKLKKLKLVGTCLSWEELNIIGQWPNLEVLKLKPNACHGLEWRPIEGRFPQLKFLLI 2597
Query: 243 QGLSELIVWHANPDNLPSLSCLI 311
+G + L W A D+ P+L L+
Sbjct: 2598 EG-TNLKCWKATNDHFPALEHLV 2619
>ref|XP_004239116.1| PREDICTED: putative late blight resistance protein homolog
R1B-17-like [Solanum lycopersicum]
Length = 1825
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +3
Query: 39 PRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVF 218
P K+P NF ++ LTL W+QI+ +A P L +LKL + A +G WE+ D+ F
Sbjct: 1667 PAKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEF 1726
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
L L+ L L L +++ W + D P L L+
Sbjct: 1727 LELKYLKLDNL-KVVQWSISDDAFPKLEHLV 1756
>gb|AAC49408.1| PRF [Solanum lycopersicum]
Length = 1824
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +3
Query: 39 PRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVF 218
P K+P NF ++ LTL W+QI+ +A P L +LKL + A +G WE+ D+ F
Sbjct: 1666 PAKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEF 1725
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
L L+ L L L +++ W + D P L L+
Sbjct: 1726 LELKYLKLDNL-KVVQWSISDDAFPKLEHLV 1755
>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
Length = 1825
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +3
Query: 39 PRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVF 218
P K+P NF ++ LTL W+QI+ +A P L +LKL + A +G WE+ D+ F
Sbjct: 1667 PAKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEF 1726
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
L L+ L L L +++ W + D P L L+
Sbjct: 1727 LELKYLKLDNL-KVVQWSISDDAFPKLEHLV 1756
>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
Length = 1824
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +3
Query: 39 PRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVF 218
P K+P NF ++ LTL W+QI+ +A P L +LKL + A +G WE+ D+ F
Sbjct: 1666 PAKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEF 1725
Query: 219 LRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
L L+ L L L +++ W + D P L L+
Sbjct: 1726 LELKYLKLDNL-KVVQWSISDDAFPKLEHLV 1755
>ref|XP_006367931.1| PREDICTED: putative late blight resistance protein homolog
R1B-23-like isoform X2 [Solanum tuberosum]
Length = 932
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/100 (38%), Positives = 52/100 (52%)
Frame = +3
Query: 12 LHFNLAIEKPRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGS 191
L+ N I P P + +R +K LTLV SWS N LA +LEVLKLK +A G+
Sbjct: 721 LYINKTIHLP---PAFFRLVRTVKKLTLVNTRFSWSDANKLAQLEHLEVLKLKENAFIGN 777
Query: 192 EWEMGDTVFLRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
W + F L+ L ++ S+L W A+ N P L L+
Sbjct: 778 SWTLEIGCFSALQVLWIE-RSDLESWMASSCNFPILRHLV 816
>ref|XP_006367930.1| PREDICTED: putative late blight resistance protein homolog
R1B-23-like isoform X1 [Solanum tuberosum]
Length = 932
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/100 (38%), Positives = 52/100 (52%)
Frame = +3
Query: 12 LHFNLAIEKPRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGS 191
L+ N I P P + +R +K LTLV SWS N LA +LEVLKLK +A G+
Sbjct: 721 LYINKTIHLP---PAFFRLVRTVKKLTLVNTRFSWSDANKLAQLEHLEVLKLKENAFIGN 777
Query: 192 EWEMGDTVFLRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
W + F L+ L ++ S+L W A+ N P L L+
Sbjct: 778 SWTLEIGCFSALQVLWIE-RSDLESWMASSCNFPILRHLV 816
>ref|XP_006365678.1| PREDICTED: putative late blight resistance protein homolog
R1C-3-like [Solanum tuberosum]
Length = 620
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 60 DNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMG-DTVFLRLRCL 236
D F+ N+K LTL + W +N LA P LEVL+ A DG++W + D VF +L+ L
Sbjct: 462 DIFLPNLKELTLSSTYIPWEAMNLLANLPNLEVLEYA--AFDGTDWRLNEDVVFRKLKRL 519
Query: 237 VLQGLSELIVWHANPDNLPSLSCLI 311
+L +L W A DN P L L+
Sbjct: 520 LLHSCRDLQKWEAGSDNFPMLEKLM 544
>ref|XP_004251533.1| PREDICTED: putative late blight resistance protein homolog
R1B-14-like [Solanum lycopersicum]
Length = 930
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +3
Query: 48 IPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEMGDTVFLRL 227
+P F++N+K L G W + L P L+ LKL DAC G++WE+G+ F L
Sbjct: 788 LPSIGTFLKNLKKLAFRGTRLHWKDLEILGKLPKLKALKLGYDACLGTDWEVGEEGFPHL 847
Query: 228 RCLVLQGLSELIVWHANPDNLPSLSCLI 311
+ L L+ L L W A+ D+ P L L+
Sbjct: 848 KFLRLKQL-YLHKWIASSDHFPCLERLV 874
>ref|XP_006356447.1| PREDICTED: uncharacterized protein LOC102594363 [Solanum tuberosum]
Length = 2035
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/96 (36%), Positives = 49/96 (51%)
Frame = +3
Query: 24 LAIEKPRKIPLWDNFIRNIKNLTLVGGHHSWSQINALAMAPYLEVLKLKVDACDGSEWEM 203
L+ P K P NF N++ LTL W+QI + P LE+LKL A +G+EWE+
Sbjct: 1875 LSYSYPTKHPHEFNFPLNLRELTLSNFRLPWTQIWTVGKLPNLEILKLLFRAFEGNEWEV 1934
Query: 204 GDTVFLRLRCLVLQGLSELIVWHANPDNLPSLSCLI 311
D+ F L+ L L L+ + W D P L L+
Sbjct: 1935 KDSDFPELKYLKLDNLN-IAEWSVMDDAFPKLEHLV 1969