BLASTX nr result
ID: Catharanthus23_contig00031202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00031202 (301 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 47 4e-07 gb|ABA97563.1| retrotransposon protein, putative, unclassified [... 42 4e-06 >ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis] Length = 1238 Score = 47.4 bits (111), Expect(2) = 4e-07 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 3/72 (4%) Frame = -1 Query: 301 LDLVISPHQTAFILVGL*MIILSFVMGLCII*TARE---VKKGFMAIKIDLAKAYDHSDW 131 LD ++SP+Q+AFIL L I + ++G + R+ K G +A+K+D++KAYD +W Sbjct: 455 LDKIVSPNQSAFILNRL--ITDNIIIGYEYLNKIRQGKGKKNGMIALKLDISKAYDRVEW 512 Query: 130 FFLKNVMLAHGF 95 FL+ M GF Sbjct: 513 NFLRCAMQKLGF 524 Score = 32.0 bits (71), Expect(2) = 4e-07 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 98 FPSPLYDLISECVSTPSYSFLINRSPYGCLKP 3 F S +L C++TPS+S LIN P G ++P Sbjct: 524 FSSNWIELTMNCITTPSFSVLINGVPKGQIQP 555 >gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 839 Score = 41.6 bits (96), Expect(2) = 4e-06 Identities = 17/35 (48%), Positives = 26/35 (74%) Frame = -1 Query: 199 REVKKGFMAIKIDLAKAYDHSDWFFLKNVMLAHGF 95 R + G+ A+K+D++KAYD +W FLK++ML GF Sbjct: 442 RNGETGYAALKLDMSKAYDRVEWGFLKDMMLKLGF 476 Score = 34.7 bits (78), Expect(2) = 4e-06 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = -3 Query: 275 NSFHPGRSINDNTIICHGIMHYMNRKRGKKRFY 177 ++F PGR I+DN ++ + + HYM +KR + Y Sbjct: 416 SAFFPGRLISDNILVAYELTHYMRQKRNGETGY 448