BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00031106
         (1007 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   453   e-125
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   451   e-124
ref|XP_002326829.1| predicted protein [Populus trichocarpa]           451   e-124
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   441   e-121
gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [...   439   e-121
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   438   e-120
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   427   e-117
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   425   e-116
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116
gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily p...   421   e-115
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     419   e-114
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   415   e-113
gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]                 412   e-112
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   412   e-112
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              412   e-112
ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutr...   411   e-112
ref|XP_006304700.1| hypothetical protein CARUB_v10011958mg [Caps...   403   e-110
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   397   e-108
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107

>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  453 bits (1166), Expect = e-125
 Identities = 218/335 (65%), Positives = 274/335 (81%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+ GM+KK ++L P++VTYTTL+RGYC K EIDEAL VF+EM+++GLKPN+ITYNTLI
Sbjct: 282  HNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLI 341

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCE ++ +KIK++ +   GG  GF+PD+CT NTL+NA+C   NL   +++FEKM+ L 
Sbjct: 342  KGLCEVQKIDKIKQIFEGALGGG-GFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLN 400

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            V+PDS TYSVLIR+ C+ GNFE+AEQLF ELSEKE+LLR+DGCTP VA+Y  +F++LC N
Sbjct: 401  VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRN 460

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT KA++VFRQLM+RGTQD  +FK LI GHC+EGT +AG+ELLV MLRRDFVPDLETY+
Sbjct: 461  GKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQ 520

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
            SLIDGLL+ G   +A+ TLEKM+KSSH P TSTFH IL  L+  GCA ES   +MLMLE 
Sbjct: 521  SLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEG 580

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            KIRQNIN+ST TVRLLF +GL++KAF+I+  LY N
Sbjct: 581  KIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYAN 615



 Score =  105 bits (263), Expect = 2e-20
 Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 2/267 (0%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ VF+ M + G+ P+ +T+N+L+  L +  R    + V  E  
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD+ TFN LI  +CK   + +G + F++M   K  PD  TY+ L+   C  G 
Sbjct: 219 -STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
              A  +   + +K   L      P V +Y  + +  C   + ++A  VF +++ +G + 
Sbjct: 278 VNIAHNVVNGMVKKSTNL-----NPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKP 332

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDT 775
           +  T+ TLI G C+        ++    L    F+PD  T  +L++    +G+ N A + 
Sbjct: 333 NEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEV 392

Query: 776 LEKMLKSSHSPGTSTFHRILVELVHNG 856
            EKM+  +  P ++T+  ++  L   G
Sbjct: 393 FEKMMVLNVRPDSATYSVLIRNLCQRG 419



 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
 Frame = +2

Query: 254  GFVPDSCTFNTLINAYCKERNLTQGMKIF---EKMLELKVQPDSTTYSVLIRSFCEIGNF 424
            GF  +  ++  ++    + RNL          ++     V+ +   ++ LIRS+ + G F
Sbjct: 113  GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLF 172

Query: 425  EKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRG--TQ 598
            +++ Q+F  +       ++ G +P V ++  +   L + G+T  A  VF +++     T 
Sbjct: 173  QESVQVFNSM-------KSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTP 225

Query: 599  DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLRSGHANLAHDTL 778
            D  TF  LI G CK      G      M R    PDL TY +L+DGL R+G  N+AH+ +
Sbjct: 226  DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVV 285

Query: 779  EKMLKSSH--SPGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINISTETVRLLF 952
              M+K S   +P   T+      LV   C        +++ E+ + + +  +  T   L 
Sbjct: 286  NGMVKKSTNLNPDVVTY----TTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLI 341

Query: 953  KNGLQEKAFEIITCLYE 1003
            K   + +  + I  ++E
Sbjct: 342  KGLCEVQKIDKIKQIFE 358


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
            gi|550323558|gb|ERP53036.1| hypothetical protein
            POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  451 bits (1159), Expect = e-124
 Identities = 217/335 (64%), Positives = 278/335 (82%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM+KK  DL P++VTYTTL+RGYC KQEIDEAL VF+EM++RGLKPNDITYNTLI
Sbjct: 287  HNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLI 346

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCE ++F+KIKE+L    GG  GFVPD+CT+NTL+NA C   N  + +K+F+KM ELK
Sbjct: 347  KGLCEVQKFDKIKEILGGAVGGR-GFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELK 405

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            VQPDS TYSVLIR+ C+ G+FE+AEQLF +LS++++LLR+DGCTP VA+Y PIF +LC+N
Sbjct: 406  VQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKN 465

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT KA++VFRQLM++GTQD P++KTLI+GHCKEGT +AG++LL+FMLRRD+VPD ETY 
Sbjct: 466  GKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYV 525

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             LI+G L+ G   LA+ TLE+MLKSS+ P TS FH IL EL+ N  A ES   V+LM+++
Sbjct: 526  LLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDR 585

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            KIRQNIN+ST T+RLLF +GL+ KAF+I+  LY+N
Sbjct: 586  KIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDN 620



 Score =  108 bits (270), Expect = 3e-21
 Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
 Frame = +2

Query: 68  TLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFSGG 247
           TL+R Y      +EA+ +F  M + G+ P+ IT+N+L+  L +  R      V  E  G 
Sbjct: 166 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG- 224

Query: 248 NEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFE 427
             G  PD+ TFN LI  +CK   + +G + F++M     +PD  TY+ L+   C  G   
Sbjct: 225 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 284

Query: 428 KAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ--D 601
            A  + + + +K   L     +P V +Y  + +  C   + ++A  VF +++ RG +  D
Sbjct: 285 IAHNVVKGMVKKMKDL-----SPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPND 339

Query: 602 VPTFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDTL 778
           + T+ TLI G C+        E+L   +  R FVPD  TY +L++    +G+ + A    
Sbjct: 340 I-TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMF 398

Query: 779 EKMLKSSHSPGTSTFHRILVELVHNG 856
           +KM +    P ++T+  ++  L   G
Sbjct: 399 KKMKELKVQPDSATYSVLIRNLCQRG 424



 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
 Frame = +2

Query: 281 NTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSE 460
           NTL+ +Y       + +K+F  M    V P   T++ L+    + G    A  +F E   
Sbjct: 165 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDE--- 221

Query: 461 KEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ-DVPTFKTLIMGHC 637
              +    G TP   ++  + +  C+N   ++  + F+++ R   + DV T+ TL+ G C
Sbjct: 222 ---MCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLC 278

Query: 638 KEGTAKAGHELLVFMLR--RDFVPDLETYESLIDGLLRSGHANLAHDTLEKMLKSSHSPG 811
           + G  +  H ++  M++  +D  PD+ TY +L+ G       + A    E+M+     P 
Sbjct: 279 RAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPN 338

Query: 812 TSTFHRILVELVHNGCALESFGLVMLML 895
             T++ ++  L    C ++ F  +  +L
Sbjct: 339 DITYNTLIKGL----CEVQKFDKIKEIL 362


>ref|XP_002326829.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  451 bits (1159), Expect = e-124
 Identities = 217/335 (64%), Positives = 278/335 (82%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM+KK  DL P++VTYTTL+RGYC KQEIDEAL VF+EM++RGLKPNDITYNTLI
Sbjct: 223  HNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLI 282

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCE ++F+KIKE+L    GG  GFVPD+CT+NTL+NA C   N  + +K+F+KM ELK
Sbjct: 283  KGLCEVQKFDKIKEILGGAVGGR-GFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELK 341

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            VQPDS TYSVLIR+ C+ G+FE+AEQLF +LS++++LLR+DGCTP VA+Y PIF +LC+N
Sbjct: 342  VQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKN 401

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT KA++VFRQLM++GTQD P++KTLI+GHCKEGT +AG++LL+FMLRRD+VPD ETY 
Sbjct: 402  GKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYV 461

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             LI+G L+ G   LA+ TLE+MLKSS+ P TS FH IL EL+ N  A ES   V+LM+++
Sbjct: 462  LLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDR 521

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            KIRQNIN+ST T+RLLF +GL+ KAF+I+  LY+N
Sbjct: 522  KIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDN 556



 Score =  108 bits (270), Expect = 3e-21
 Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
 Frame = +2

Query: 68  TLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFSGG 247
           TL+R Y      +EA+ +F  M + G+ P+ IT+N+L+  L +  R      V  E  G 
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG- 160

Query: 248 NEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFE 427
             G  PD+ TFN LI  +CK   + +G + F++M     +PD  TY+ L+   C  G   
Sbjct: 161 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220

Query: 428 KAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ--D 601
            A  + + + +K   L     +P V +Y  + +  C   + ++A  VF +++ RG +  D
Sbjct: 221 IAHNVVKGMVKKMKDL-----SPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPND 275

Query: 602 VPTFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDTL 778
           + T+ TLI G C+        E+L   +  R FVPD  TY +L++    +G+ + A    
Sbjct: 276 I-TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMF 334

Query: 779 EKMLKSSHSPGTSTFHRILVELVHNG 856
           +KM +    P ++T+  ++  L   G
Sbjct: 335 KKMKELKVQPDSATYSVLIRNLCQRG 360



 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
 Frame = +2

Query: 281 NTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSE 460
           NTL+ +Y       + +K+F  M    V P   T++ L+    + G    A  +F E   
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDE--- 157

Query: 461 KEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ-DVPTFKTLIMGHC 637
              +    G TP   ++  + +  C+N   ++  + F+++ R   + DV T+ TL+ G C
Sbjct: 158 ---MCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLC 214

Query: 638 KEGTAKAGHELLVFMLR--RDFVPDLETYESLIDGLLRSGHANLAHDTLEKMLKSSHSPG 811
           + G  +  H ++  M++  +D  PD+ TY +L+ G       + A    E+M+     P 
Sbjct: 215 RAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPN 274

Query: 812 TSTFHRILVELVHNGCALESFGLVMLML 895
             T++ ++  L    C ++ F  +  +L
Sbjct: 275 DITYNTLIKGL----CEVQKFDKIKEIL 298


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  444 bits (1143), Expect = e-122
 Identities = 211/335 (62%), Positives = 271/335 (80%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM+K+G  L PN+V+YTTL+RGYC KQE++ AL VF+EMI  GLKP  ITYNTL+
Sbjct: 282  HNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLV 341

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA+RF++IKE+L E + G+ G +PD+CTFNTLI  +C   NL + +K+FE ML LK
Sbjct: 342  QGLCEAKRFDRIKEIL-EGTLGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLK 400

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            V+PDS TYS+LIRSFC+ G F++AE+LF +L +KE+LLR+DGCTP +A+Y P+F+Y C+ 
Sbjct: 401  VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKI 460

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA+KVFRQLMRRGTQD   ++ LIMGHCKEGT    HELLV MLRRD+VP++  YE
Sbjct: 461  GKTKKAEKVFRQLMRRGTQDPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYE 520

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
            SLI+GLL+     +A+DTLEKMLKSSH P +STFH+IL EL+   CA E   LV LML+ 
Sbjct: 521  SLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSTFHQILTELIKKNCASECASLVTLMLDN 580

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            K+RQNIN+ST+TVR+LF+ GL+E+AFEI+ CLYEN
Sbjct: 581  KVRQNINLSTDTVRILFQAGLRERAFEIVRCLYEN 615



 Score =  102 bits (254), Expect = 2e-19
 Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARR----FEKIKEVL 229
           + TLI+ Y       E+L VF  M + G+ P+ +T+N+L   L +  R    +E   E+L
Sbjct: 159 FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEML 218

Query: 230 KEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFC 409
           K F     G  PD  TFN LI  +C    + +G + F++M   + +PD  TY+ ++   C
Sbjct: 219 KTF-----GAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLC 273

Query: 410 EIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRR 589
             G  E A  +      K ++ R    +P V SY  + +  CE  + E+A  VF +++  
Sbjct: 274 RAGKVEIAHNVL-----KGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDC 328

Query: 590 GTQDVP-TFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANL 763
           G +    T+ TL+ G C+        E+L   L     +PD  T+ +LI      G+ + 
Sbjct: 329 GLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITFHCNVGNLDE 388

Query: 764 AHDTLEKMLKSSHSPGTSTFHRILVELVHNG 856
           A    E ML     P ++T+  ++      G
Sbjct: 389 AVKVFENMLYLKVKPDSATYSILIRSFCQKG 419


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  441 bits (1134), Expect = e-121
 Identities = 215/335 (64%), Positives = 267/335 (79%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM+KK  +L PN+VTYTTLIRGYC KQ++ EAL +  EM++RGLKPN ITYNTLI
Sbjct: 291  HNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 350

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA++ +KIKE+L E   G+ GF+PD+CT NTLI A+C    L +   +FEKM EL+
Sbjct: 351  QGLCEAQKLDKIKEIL-EGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 409

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            VQPDS TYSVL+RS C+ G+F +AE+ F EL+EKE+LL + GC P VA+Y P+F+YLC N
Sbjct: 410  VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 469

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA++VFRQLM+RGTQD P++KTLI+GHC+EGT +AG +LLV MLRRDFVPD ETY 
Sbjct: 470  GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             +IDGLL+ G   LAH +LEKMLKSSH P T+ FH IL  LV  GCA ES  LV LMLE+
Sbjct: 530  LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            +IRQNI++ST TVRLL+K+GLQ+KAF  I  LYEN
Sbjct: 590  RIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYEN 624



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 2/267 (0%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ VF  M   G+ P+ +T+N+L+  + +  R    K++  E  
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD+ TFN LI  +C    + +G   F++M   K  PD  TY+ L+   C  G 
Sbjct: 228 D-TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
            + A  +      K ++ ++   +P V +Y  + +  C      +A  +  +++ RG + 
Sbjct: 287 VKIAHNVV-----KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKP 341

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDT 775
           +  T+ TLI G C+        E+L  M+    F+PD  T  +LI      G    A   
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSV 401

Query: 776 LEKMLKSSHSPGTSTFHRILVELVHNG 856
            EKM +    P ++T+  ++  L   G
Sbjct: 402 FEKMSELRVQPDSATYSVLVRSLCQRG 428


>gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  439 bits (1130), Expect = e-121
 Identities = 220/335 (65%), Positives = 264/335 (78%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+ GM K+  DL PN+VTYTTLIRGYC KQEID+AL + +EM  RGLKPN  TYNTLI
Sbjct: 274  HNVVNGMSKRSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLI 333

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA++ +KIKE+ +    G E F PD+CTFNTL++++C   NL + +K+F KM ELK
Sbjct: 334  KGLCEAQKLDKIKEIFEGTMIGGE-FTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELK 392

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            V PDS TYSVLI S C+ G++ +AE+LF ELS+KE+LLR+DGC P VASY PIF YL  N
Sbjct: 393  VPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSN 452

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA++VFRQLMRRGTQD  ++KTLIMG+CKEGT +AG+ELLV+MLRRDFVPD E Y 
Sbjct: 453  GKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPDEEIYV 512

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
            SLIDGLL+ G   LA  TLEKMLKSSH P TSTFH +L EL+   CA ES   V LMLEK
Sbjct: 513  SLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLAELLKQHCAHESASFVTLMLEK 572

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            KIRQNIN+ST  VRLLF +GL++KAFEI+  LYEN
Sbjct: 573  KIRQNINLSTHLVRLLFSHGLRDKAFEIVGMLYEN 607



 Score =  102 bits (255), Expect = 2e-19
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ +F  M + G+ P+ +++N+L+  L +  R    K V  E  
Sbjct: 151 FNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEML 210

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD+ TFN LI  +C    + +G + F+ M   +  PD  TY+ L+   C  G 
Sbjct: 211 S-MYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGK 269

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
            E A  +   +S+     R+   TP V +Y  + +  C   + +KA  +  ++  RG + 
Sbjct: 270 VEIAHNVVNGMSK-----RSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKP 324

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLV-FMLRRDFVPDLETYESLIDGLLRSGHANLAHDT 775
           +  T+ TLI G C+        E+    M+  +F PD  T+ +L+     +G+ + A   
Sbjct: 325 NGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEALKV 384

Query: 776 LEKMLKSSHSPGTSTFHRILVELVHNG 856
             KM +    P ++T+  ++  L   G
Sbjct: 385 FAKMSELKVPPDSATYSVLICSLCQRG 411


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  438 bits (1127), Expect = e-120
 Identities = 208/335 (62%), Positives = 268/335 (80%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM K+G  L PN+V+YTTL+RGYC KQE++ AL VF+EMI RGLKP  ITYNTL+
Sbjct: 276  HNVLKGMAKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLV 335

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA+RF++IKE+L E + G+ G +PD+CTFNTLI  +C   NL + +K+FE ML LK
Sbjct: 336  QGLCEAKRFDRIKEIL-EGTLGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLK 394

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            V+PDS TYS+LIRSFC+ G F++AE+LF +L +KEVLLR+DGCTP +A+Y P+F+Y C+ 
Sbjct: 395  VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKI 454

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA+KVFRQLMRRGTQD   ++ LI GHCKEGT    H LLV MLRRD+VP++  YE
Sbjct: 455  GKTKKAEKVFRQLMRRGTQDPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIYE 514

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
            SLI+GLL+     +A+DTLEKMLKSSH P +S +H+IL EL+   CA E   LV LML+ 
Sbjct: 515  SLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSIYHQILTELIKKNCASECASLVTLMLDN 574

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            K+RQNIN+ST+TV++LF+ GL+E+AFEI+ CLYEN
Sbjct: 575  KVRQNINLSTDTVKILFQTGLRERAFEIVRCLYEN 609



 Score =  102 bits (253), Expect = 3e-19
 Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 6/271 (2%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARR----FEKIKEVL 229
           + TLI+ Y       E+L VF  M + G+ P+ +T+N+L   L +  R    +E   E+L
Sbjct: 153 FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEML 212

Query: 230 KEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFC 409
           K F     G  PD  TFN LI  +C    + +G + F++M   + +P+  TY+ ++   C
Sbjct: 213 KTF-----GAKPDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLC 267

Query: 410 EIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRR 589
             G  E A  + + +++     R    +P V SY  + +  CE  + E+A  VF +++ R
Sbjct: 268 RAGKVEIAHNVLKGMAK-----RGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDR 322

Query: 590 GTQDVP-TFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANL 763
           G +    T+ TL+ G C+        E+L   L     +PD  T+ +LI      G+ + 
Sbjct: 323 GLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVGNLDE 382

Query: 764 AHDTLEKMLKSSHSPGTSTFHRILVELVHNG 856
           A    E ML     P ++T+  ++      G
Sbjct: 383 AVKVFENMLYLKVKPDSATYSILIRSFCQKG 413


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  427 bits (1097), Expect = e-117
 Identities = 209/338 (61%), Positives = 267/338 (78%), Gaps = 5/338 (1%)
 Frame = +2

Query: 5    NVMKGMLKKGSD-----LMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITY 169
            NV+KGM+ K S+     L PN+VTYTTLIRGYC +QE+DEALGV +EM ++G+KPN+ITY
Sbjct: 277  NVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITY 336

Query: 170  NTLIGGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKM 349
            NTL  GLCEA+R +KIKE+L+    G EGF PD+CTFNTL++++C   NL + +K+F  M
Sbjct: 337  NTLFKGLCEAKRLDKIKEILEGAMRG-EGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMM 395

Query: 350  LELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKY 529
             ELKV PDS TYSVLIRS+CE  ++ KAE+LF ELS+K++LL + GCTP VASY PIF+Y
Sbjct: 396  SELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASYKPIFEY 455

Query: 530  LCENGKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDL 709
            LC NG+T+KAD+VFRQL++RGTQD P+FKTLIMGHC+EGT +AG++L+V MLRRD+VPD+
Sbjct: 456  LCSNGRTKKADEVFRQLLKRGTQDPPSFKTLIMGHCREGTYEAGYKLVVLMLRRDYVPDV 515

Query: 710  ETYESLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVML 889
            + Y+SLIDG L  G+  LA  TLEKMLKSSH P TSTFH IL  L+   CA ES  L  L
Sbjct: 516  KIYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAALLEKHCARESASLFSL 575

Query: 890  MLEKKIRQNINISTETVRLLFKNGLQEKAFEIITCLYE 1003
            MLEK  R NI++ST+ ++LLF  GLQEKAF+I+  L++
Sbjct: 576  MLEKNFRPNIDLSTDLLKLLFSEGLQEKAFKIVGLLHD 613



 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 2/291 (0%)
 Frame = +2

Query: 62   YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
            + +LIR Y       EA+ VF  M + G+  +  ++N+L   L +  R   ++ V  E  
Sbjct: 153  FNSLIRSYGAAGLFQEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEML 212

Query: 242  GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
            G   G  PD+ TFN LI  +C    + +G   F++M   K +PD  TY+ L+   C  G 
Sbjct: 213  G-MYGVEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGK 271

Query: 422  FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
             E A  + + +  K      +   P V +Y  + +  C   + ++A  V  ++  +G + 
Sbjct: 272  VEIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKP 331

Query: 599  DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRD-FVPDLETYESLIDGLLRSGHANLAHDT 775
            +  T+ TL  G C+        E+L   +R + F PD  T+ +L+     +G+   A   
Sbjct: 332  NEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEALKV 391

Query: 776  LEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINIS 928
               M +    P ++T+      L+ + C    +     + ++  ++ I +S
Sbjct: 392  FRMMSELKVPPDSATYS----VLIRSWCERRDYSKAEELFDELSKKQILLS 438


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  425 bits (1092), Expect = e-116
 Identities = 207/333 (62%), Positives = 262/333 (78%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            +NV+KGM KK  DL PN+VTYTTLIRGYC K+EI++AL VF+EM+ +GLK N+ITYNTLI
Sbjct: 275  YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEAR+FEKIK++L E + G+  F PD+CTFNTL++ +C   NL   +K+FE+M ELK
Sbjct: 335  KGLCEARKFEKIKDIL-EGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            +QPDS TYS L+RS C+ G++EKAE L  +L E+++LL  DGC P VA+Y PIFKYLCE 
Sbjct: 394  IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA+K FRQLMRRGTQD P++KTLIMGHCKEGT ++G+ELLV MLR+DF PD ETYE
Sbjct: 454  GKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYE 513

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
            SLI+GLL      LA  +LEKML+SSH P +STFH IL +L+  G A ES  L+ LML+K
Sbjct: 514  SLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDK 573

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLY 1000
             IRQN++ ST  VRLLF  G+ +KAF+++  LY
Sbjct: 574  NIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLY 606



 Score =  104 bits (259), Expect = 6e-20
 Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +L+R +       E++ VF  M + G+ P+ +T+N+L+  L +  R    K+V  E  
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD+ TFN LI  +C    +  G +IF  +     +PD  TY+ L+   C  G 
Sbjct: 212 S-TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
              A  + + + +K V L      P V +Y  + +  C   + EKA  VF +++ +G + 
Sbjct: 271 VTVAYNVVKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKA 325

Query: 599 DVPTFKTLIMGHCK-----------EGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLR 745
           +  T+ TLI G C+           EGTA  G           F PD  T+ +L+     
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDG----------TFSPDTCTFNTLMHCHCH 375

Query: 746 SGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKI 907
           +G+ + A    E+M +    P ++T+  ++  L   G   ++  L+  +LE+KI
Sbjct: 376 AGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
 Frame = +2

Query: 167  YNTLIGGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEK 346
            +N+L+     A  F++  +V       + G  P   TFN+L+    K        K++++
Sbjct: 152  FNSLMRNFNRAGLFQESIKVFTIMK--SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209

Query: 347  MLELK-VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIF 523
            ML    V PD+ T+++LIR FC  G  +   ++F +LS         GC P V +Y  + 
Sbjct: 210  MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRF-------GCEPDVVTYNTLV 262

Query: 524  KYLCENGKTEKADKVFRQLMRRGTQ---DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRD 694
              LC  GK   A  V + + ++      +V T+ TLI G+C +   +    +   M+ + 
Sbjct: 263  DGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQG 322

Query: 695  FVPDLETYESLIDGLLRSGHANLAHDTLEKML-KSSHSPGTSTFHRILVELVHNGCALES 871
               +  TY +LI GL  +       D LE      + SP T TF+ ++    H G   ++
Sbjct: 323  LKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDA 382

Query: 872  FGLVMLMLEKKIRQNINISTETVRLLFKNGLQEKAFEIITCLYE 1003
              +   M E KI+ +    +  VR L + G  EKA +++  L E
Sbjct: 383  LKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE 426


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  424 bits (1090), Expect = e-116
 Identities = 206/333 (61%), Positives = 262/333 (78%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            +NV+KGM KK  DL PN+VTYTTLIRGYC K+EI++AL VF+EM+ +GLK N+ITYNTLI
Sbjct: 275  YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEAR+FEKIK++L E + G+  F PD+CTFNTL++ +C   NL   +K+FE+M ELK
Sbjct: 335  KGLCEARKFEKIKDIL-EGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            +QPDS TYS L+RS C+ G++EKAE L  +L E+++LL  DGC P VA+Y PIFKYLCE 
Sbjct: 394  IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA+K FRQLMRRGTQD P++KTLIMGHCKEGT ++G+ELLV MLR+DF+PD ETYE
Sbjct: 454  GKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYE 513

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
            SLI+GLL      LA  +LEKML+SSH P +STFH IL +L+  G   ES  L+ LML+K
Sbjct: 514  SLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDK 573

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLY 1000
             IRQN++ ST  VRLLF  G+ +KAF+++  LY
Sbjct: 574  NIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLY 606



 Score =  104 bits (259), Expect = 6e-20
 Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +L+R +       E++ VF  M + G+ P+ +T+N+L+  L +  R    K+V  E  
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD+ TFN LI  +C    +  G +IF  +     +PD  TY+ L+   C  G 
Sbjct: 212 S-TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
              A  + + + +K V L      P V +Y  + +  C   + EKA  VF +++ +G + 
Sbjct: 271 VTVAYNVVKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKA 325

Query: 599 DVPTFKTLIMGHCK-----------EGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLR 745
           +  T+ TLI G C+           EGTA  G           F PD  T+ +L+     
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDG----------TFSPDTCTFNTLMHCHCH 375

Query: 746 SGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKI 907
           +G+ + A    E+M +    P ++T+  ++  L   G   ++  L+  +LE+KI
Sbjct: 376 AGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
 Frame = +2

Query: 167  YNTLIGGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEK 346
            +N+L+     A  F++  +V       + G  P   TFN+L+    K        K++++
Sbjct: 152  FNSLMRNFNRAGLFQESIKVFTIMK--SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209

Query: 347  MLELK-VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIF 523
            ML    V PD+ T+++LIR FC  G  +   ++F +LS         GC P V +Y  + 
Sbjct: 210  MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRF-------GCEPDVVTYNTLV 262

Query: 524  KYLCENGKTEKADKVFRQLMRRGTQ---DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRD 694
              LC  GK   A  V + + ++      +V T+ TLI G+C +   +    +   M+ + 
Sbjct: 263  DGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQG 322

Query: 695  FVPDLETYESLIDGLLRSGHANLAHDTLEKML-KSSHSPGTSTFHRILVELVHNGCALES 871
               +  TY +LI GL  +       D LE      + SP T TF+ ++    H G   ++
Sbjct: 323  LKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDA 382

Query: 872  FGLVMLMLEKKIRQNINISTETVRLLFKNGLQEKAFEIITCLYE 1003
              +   M E KI+ +    +  VR L + G  EKA +++  L E
Sbjct: 383  LKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE 426


>gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 724

 Score =  421 bits (1081), Expect = e-115
 Identities = 210/334 (62%), Positives = 258/334 (77%)
 Frame = +2

Query: 5    NVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIG 184
            NV++GM KK  DL PN+VTYTTL+RGYC KQEIDEAL VF EMI+R L+PN ITYNTLI 
Sbjct: 287  NVVRGMSKKSLDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIK 346

Query: 185  GLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKV 364
            GL E   +EKIKE+L E  G +  FVPD+CT NTLINA+C   N+ + + +F++M EL V
Sbjct: 347  GLSEVHEYEKIKEIL-EGMGEDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNV 405

Query: 365  QPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENG 544
             PDS TYSV+IRS C+ G+FEKAE+ F EL+EKE+LL + GCTP VA+Y P+F+YLC NG
Sbjct: 406  LPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFEYLCGNG 465

Query: 545  KTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYES 724
            KT+KA+ VFRQLM+RG QD P +KTLI+GHC+EGT K G+ELLV MLRRDF P  E Y+S
Sbjct: 466  KTKKAEIVFRQLMKRGRQDPPAYKTLILGHCREGTFKDGYELLVLMLRRDFEPGFEIYDS 525

Query: 725  LIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKK 904
            LI GLL+ G   LAH TLEKMLKSSH P TS+ H IL EL+   CA E+  LV LML+ +
Sbjct: 526  LICGLLQKGEPLLAHLTLEKMLKSSHLPQTSSVHSILAELLKKSCAQEAASLVTLMLDTR 585

Query: 905  IRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            IRQN+N+ST+T +LLF   LQ+KAF+II  LY+N
Sbjct: 586  IRQNVNLSTQTAKLLFARRLQDKAFQIIGLLYDN 619



 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 71/267 (26%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ VF+ M   G+ P+ +++N L+  L +  R    K V  E  
Sbjct: 163 FNSLIRSYGKAGLFQESIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEML 222

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD  TFN LI  +C    + +G + F++M   K  PD  TY+ ++   C  G 
Sbjct: 223 S-TYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGK 281

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLM-RRGTQ 598
              A  + + +S+K + L      P V +Y  + +  C   + ++A  VF++++ RR   
Sbjct: 282 VGIARNVVRGMSKKSLDL-----NPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRP 336

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRD-FVPDLETYESLIDGLLRSGHANLAHDT 775
           +  T+ TLI G  +    +   E+L  M     FVPD  T  +LI+    + + + A + 
Sbjct: 337 NRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDEALNV 396

Query: 776 LEKMLKSSHSPGTSTFHRILVELVHNG 856
            ++M + +  P ++T+  I+  L   G
Sbjct: 397 FKRMSELNVLPDSATYSVIIRSLCQRG 423


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  419 bits (1076), Expect = e-114
 Identities = 209/334 (62%), Positives = 258/334 (77%)
 Frame = +2

Query: 5    NVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIG 184
            NV+KGM KK  DL PNIVTYTTLI+GYCGKQEIDEAL V  EM  RGLKPN ITYNTLI 
Sbjct: 335  NVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIK 394

Query: 185  GLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKV 364
            GLCEA++ + ++++L       E FVP++CTFNTLI+ +C+   L + +K+FEKMLEL+V
Sbjct: 395  GLCEAQKLDDVRKILDGTMRRGE-FVPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQV 453

Query: 365  QPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENG 544
              DS TYS LIRS C+ G++ +AE+LF +LS+KE+LL +DGC P VA+Y P+F++LC NG
Sbjct: 454  LQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRNG 513

Query: 545  KTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYES 724
            KT+KA++VFRQLM+RGTQD P++KTLIMGHC+EGT +AG+ELLV MLRRDFVPD E YES
Sbjct: 514  KTKKAERVFRQLMKRGTQDPPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIYES 573

Query: 725  LIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKK 904
            LI GLL+     LA  TLEKML+SSH P  S FH IL EL+  GCA ES     LMLE+K
Sbjct: 574  LITGLLQKDKPLLAKTTLEKMLRSSHLPRASAFHCILEELLKKGCAKESASFATLMLEQK 633

Query: 905  IRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
             RQNI +ST  + LLF NGL +KAFE+I  LYE+
Sbjct: 634  FRQNITLSTNLITLLFSNGLGDKAFELIKVLYES 667



 Score =  110 bits (276), Expect = 7e-22
 Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 2/284 (0%)
 Frame = +2

Query: 62   YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
            + +LIR Y       E++ +F  M    + P+ +T+N+L+  L +  R    + V  E  
Sbjct: 211  FNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEML 270

Query: 242  GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
            G   G  PD+ TFN LI  +C    + +G   F++M   K +PD  TY+ L+   C  G 
Sbjct: 271  G-TYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGK 329

Query: 422  FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
             + A  + + +S+K V L      P + +Y  + K  C   + ++A  V +++  RG + 
Sbjct: 330  VDIARNVVKGMSKKSVDL-----NPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKP 384

Query: 599  DVPTFKTLIMGHCKEGTAKAGHELLVFMLRR-DFVPDLETYESLIDGLLRSGHANLAHDT 775
            +  T+ TLI G C+        ++L   +RR +FVP+  T+ +LI    ++G  + A   
Sbjct: 385  NGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGRLDEALKV 444

Query: 776  LEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKI 907
             EKML+      ++T+  ++  L   G  + +  L   + +K+I
Sbjct: 445  FEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEI 488


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  415 bits (1066), Expect = e-113
 Identities = 205/335 (61%), Positives = 257/335 (76%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM+KK  +L PN+VTYTTLIRGYC KQ++ EAL +  EM++RGLKPN ITYNTLI
Sbjct: 362  HNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 421

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA++ +KIKE+L E   G+ GF+PD+CT NTLI A+C    L +   +FEKM EL+
Sbjct: 422  QGLCEAQKLDKIKEIL-EGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 480

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            VQPDS TYSVL+RS C+ G+F +AE+ F EL+EKE+LL + GC P VA+Y P+F+YLC N
Sbjct: 481  VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 540

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA++VFRQLM+RGTQD P++KTLI+GHC+EGT +AG +LLV MLRRDFVPD ETY 
Sbjct: 541  GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 600

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             +IDGLL+ G   LAH +LEKMLKSSH P T+ FH IL  LV                E+
Sbjct: 601  LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK--------------ER 646

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            +IRQNI++ST TVRLL+K+GLQ+KAF  I  LYEN
Sbjct: 647  RIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYEN 681



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 2/252 (0%)
 Frame = +2

Query: 107 EALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNT 286
           E++ VF  M   G+ P+ +T+N+L+  + +  R    K++  E      G  PD+ TFN 
Sbjct: 254 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD-TYGVTPDTYTFNI 312

Query: 287 LINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKE 466
           LI  +C    + +G   F++M   K  PD  TY+ L+   C  G  + A  +      K 
Sbjct: 313 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV-----KG 367

Query: 467 VLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ-DVPTFKTLIMGHCKE 643
           ++ ++   +P V +Y  + +  C      +A  +  +++ RG + +  T+ TLI G C+ 
Sbjct: 368 MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 427

Query: 644 GTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDTLEKMLKSSHSPGTST 820
                  E+L  M+    F+PD  T  +LI      G    A    EKM +    P ++T
Sbjct: 428 QKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT 487

Query: 821 FHRILVELVHNG 856
           +  ++  L   G
Sbjct: 488 YSVLVRSLCQRG 499



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 33/266 (12%)
 Frame = +2

Query: 305  KERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEK------- 463
            K+    + +K+F+ M E+ V P   T++ L+    + G    A+QLF E+ +        
Sbjct: 248  KKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDT 307

Query: 464  ---EVLLR--------NDG-----------CTPFVASYAPIFKYLCENGKTEKADKVFRQ 577
                +L+R        ++G           C P V +Y  +   LC  GK + A  V + 
Sbjct: 308  YTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKG 367

Query: 578  LMRRG---TQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLRS 748
            ++++    + +V T+ TLI G+C +        LL  M+ R   P+  TY +LI GL  +
Sbjct: 368  MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 427

Query: 749  GHANLAHDTLEKML-KSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINI 925
               +   + LE M+      P T T + ++      G   E+F +   M E +++ +   
Sbjct: 428  QKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT 487

Query: 926  STETVRLLFKNGLQEKAFEIITCLYE 1003
             +  VR L + G   +A E    L E
Sbjct: 488  YSVLVRSLCQRGDFRRAEEFFDELAE 513


>gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score =  412 bits (1058), Expect = e-112
 Identities = 204/338 (60%), Positives = 260/338 (76%), Gaps = 3/338 (0%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+ GMLKK +D+ PN+V+YTTL+RGYC KQEIDEA+ VF +M++RGLKPN +TYNTLI
Sbjct: 245  HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 304

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEG---FVPDSCTFNTLINAYCKERNLTQGMKIFEKML 352
             GL EA R+++IK++L    GGN+    F PD+CTFN LI A+C   +L   MK+F++ML
Sbjct: 305  KGLSEAHRYDEIKDIL---IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 361

Query: 353  ELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYL 532
             +K+ PDS +YSVLIR+ C    F++AE LF EL EKEVLL  D C P  A+Y P+F+YL
Sbjct: 362  NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 421

Query: 533  CENGKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLE 712
            C NGKT++A+KVFRQLM+RG QD P++KTLI GHC+EG  K  +ELLV MLRR+FVPDLE
Sbjct: 422  CANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLE 481

Query: 713  TYESLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLM 892
            TYE LIDGLL+ G A LAHDTL++ML+SS+ P  +TFH +L EL     A ESF LV LM
Sbjct: 482  TYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLM 541

Query: 893  LEKKIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            LEK+IRQNI++ST+ VRLLF +  +EKAF I+  LY+N
Sbjct: 542  LEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDN 579


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g02060, chloroplastic; Flags: Precursor
            gi|332189251|gb|AEE27372.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  412 bits (1058), Expect = e-112
 Identities = 204/338 (60%), Positives = 260/338 (76%), Gaps = 3/338 (0%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+ GMLKK +D+ PN+V+YTTL+RGYC KQEIDEA+ VF +M++RGLKPN +TYNTLI
Sbjct: 264  HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEG---FVPDSCTFNTLINAYCKERNLTQGMKIFEKML 352
             GL EA R+++IK++L    GGN+    F PD+CTFN LI A+C   +L   MK+F++ML
Sbjct: 324  KGLSEAHRYDEIKDIL---IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380

Query: 353  ELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYL 532
             +K+ PDS +YSVLIR+ C    F++AE LF EL EKEVLL  D C P  A+Y P+F+YL
Sbjct: 381  NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440

Query: 533  CENGKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLE 712
            C NGKT++A+KVFRQLM+RG QD P++KTLI GHC+EG  K  +ELLV MLRR+FVPDLE
Sbjct: 441  CANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLE 500

Query: 713  TYESLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLM 892
            TYE LIDGLL+ G A LAHDTL++ML+SS+ P  +TFH +L EL     A ESF LV LM
Sbjct: 501  TYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLM 560

Query: 893  LEKKIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            LEK+IRQNI++ST+ VRLLF +  +EKAF I+  LY+N
Sbjct: 561  LEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDN 598



 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 3/257 (1%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ +F  M   G+ P+ +T+N+L+  L +  R     ++  E  
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PDS TFNTLIN +CK   + +  +IF+ M      PD  TY+ +I   C  G 
Sbjct: 201 R-TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
            + A  +   + +K   +      P V SY  + +  C   + ++A  VF  ++ RG + 
Sbjct: 260 VKIAHNVLSGMLKKATDVH-----PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLV--FMLRRDFVPDLETYESLIDGLLRSGHANLAHD 772
           +  T+ TLI G  +        ++L+        F PD  T+  LI     +GH + A  
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374

Query: 773 TLEKMLKSSHSPGTSTF 823
             ++ML     P ++++
Sbjct: 375 VFQEMLNMKLHPDSASY 391


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  412 bits (1058), Expect = e-112
 Identities = 200/316 (63%), Positives = 250/316 (79%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+KGM+KK  +L PN+VTYTTLIRGYC KQ++ EAL +  EM++RGLKPN ITYNTLI
Sbjct: 291  HNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 350

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA++ +KIKE+L E   G+ GF+PD+CT NTLI A+C    L +   +FEKM EL+
Sbjct: 351  QGLCEAQKLDKIKEIL-EGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 409

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            VQPDS TYSVL+RS C+ G+F +AE+ F EL+EKE+LL + GC P VA+Y P+F+YLC N
Sbjct: 410  VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 469

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA++VFRQLM+RGTQD P++KTLI+GHC+EGT +AG +LLV MLRRDFVPD ETY 
Sbjct: 470  GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             +IDGLL+ G   LAH +LEKMLKSSH P T+ FH IL  LV  GCA ES  LV LMLE+
Sbjct: 530  LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589

Query: 902  KIRQNINISTETVRLL 949
            +IRQNI++ST T+  L
Sbjct: 590  RIRQNIDLSTHTMEEL 605



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 2/267 (0%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ VF  M   G+ P+ +T+N+L+  + +  R    K++  E  
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PD+ TFN LI  +C    + +G   F++M   K  PD  TY+ L+   C  G 
Sbjct: 228 D-TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
            + A  +      K ++ ++   +P V +Y  + +  C      +A  +  +++ RG + 
Sbjct: 287 VKIAHNVV-----KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKP 341

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDT 775
           +  T+ TLI G C+        E+L  M+    F+PD  T  +LI      G    A   
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSV 401

Query: 776 LEKMLKSSHSPGTSTFHRILVELVHNG 856
            EKM +    P ++T+  ++  L   G
Sbjct: 402 FEKMSELRVQPDSATYSVLVRSLCQRG 428


>ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutrema salsugineum]
            gi|557096254|gb|ESQ36836.1| hypothetical protein
            EUTSA_v10006939mg [Eutrema salsugineum]
          Length = 720

 Score =  411 bits (1056), Expect = e-112
 Identities = 200/335 (59%), Positives = 257/335 (76%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+ GMLKK +D+ PN V+YTTL+RGYC KQEIDEAL VF +M+ RGLKPN +T+NTLI
Sbjct: 269  HNVLNGMLKKAADVHPNTVSYTTLVRGYCMKQEIDEALVVFHDMLTRGLKPNVVTFNTLI 328

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GL EA+R+++IKE+L      +  F PD+CTFN LI A+C   +L   MK+F +M+ +K
Sbjct: 329  KGLSEAQRYDEIKEILNGRDYTSTTFAPDACTFNILIKAHCDAGHLDAAMKVFHQMVNMK 388

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            + PDS +YSVLIR+ C    F++A  LF EL EKEVLL  DGC P  A+Y P+F+YLC N
Sbjct: 389  LHPDSASYSVLIRTLCLRNEFDRAATLFNELFEKEVLLGKDGCKPLAAAYNPMFQYLCAN 448

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT++A+KVFRQLM+RG QD P+++TLI GHC+EG  KA +ELLV MLRR+FVPDLETYE
Sbjct: 449  GKTKQAEKVFRQLMKRGAQDPPSYRTLIAGHCREGKFKAAYELLVLMLRREFVPDLETYE 508

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             LIDGLL+ G A LA+DTL++ML+SS+ P  +TFH +L ELV    A ESFG + LMLEK
Sbjct: 509  ILIDGLLKVGEAVLAYDTLQRMLRSSYLPAATTFHSVLAELVKGKFANESFGFMRLMLEK 568

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            +IRQNI++ST  VRLLF +G ++KAF I+  LY+N
Sbjct: 569  RIRQNIDLSTHAVRLLFSSGQKDKAFLIVRLLYDN 603



 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 6/260 (2%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ +F+ M    + P+ +T+N+L+  L +  +     +V  E  
Sbjct: 146 FNSLIRSYGNAGLFQESVKLFEAMKKMCISPSVLTFNSLLSILLKRGKTGMALDVFDEMR 205

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PDS TFN LI+  CK   + +  +IF+ M   K  PD  TY+ +I   C  G 
Sbjct: 206 R-TYGLTPDSYTFNILISGLCKNSMVDEAFRIFKDMEPYKCSPDVVTYNTIIDGLCRAGK 264

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
            + A  +   + +K   +      P   SY  + +  C   + ++A  VF  ++ RG + 
Sbjct: 265 VKIAHNVLNGMLKKAADVH-----PNTVSYTTLVRGYCMKQEIDEALVVFHDMLTRGLKP 319

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRD-----FVPDLETYESLIDGLLRSGHANL 763
           +V TF TLI G  +   A+   E+   +  RD     F PD  T+  LI     +GH + 
Sbjct: 320 NVVTFNTLIKGLSE---AQRYDEIKEILNGRDYTSTTFAPDACTFNILIKAHCDAGHLDA 376

Query: 764 AHDTLEKMLKSSHSPGTSTF 823
           A     +M+     P ++++
Sbjct: 377 AMKVFHQMVNMKLHPDSASY 396



 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
 Frame = +2

Query: 248 NEGFVPDSCTFNTLINAYCKERNLTQGMKIF---EKMLELKVQPDSTTYSVLIRSFCEIG 418
           N+GF     +F  ++    + RNL          EK     VQ +   ++ LIRS+   G
Sbjct: 98  NKGFSHKEHSFFLMLELLGRARNLNVARNFLFSIEKRSNGCVQLEDRYFNSLIRSYGNAG 157

Query: 419 NFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRG-- 592
            F+++ +LF+ + +  +       +P V ++  +   L + GKT  A  VF ++ R    
Sbjct: 158 LFQESVKLFEAMKKMCI-------SPSVLTFNSLLSILLKRGKTGMALDVFDEMRRTYGL 210

Query: 593 TQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLRSGHANLAHD 772
           T D  TF  LI G CK         +   M      PD+ TY ++IDGL R+G   +AH+
Sbjct: 211 TPDSYTFNILISGLCKNSMVDEAFRIFKDMEPYKCSPDVVTYNTIIDGLCRAGKVKIAHN 270

Query: 773 TLEKMLKSSHS--PGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINISTETVRL 946
            L  MLK +    P T ++      LV   C  +     +++    + + +  +  T   
Sbjct: 271 VLNGMLKKAADVHPNTVSY----TTLVRGYCMKQEIDEALVVFHDMLTRGLKPNVVTFNT 326

Query: 947 LFKNGLQE 970
           L K GL E
Sbjct: 327 LIK-GLSE 333


>ref|XP_006304700.1| hypothetical protein CARUB_v10011958mg [Capsella rubella]
            gi|482573411|gb|EOA37598.1| hypothetical protein
            CARUB_v10011958mg [Capsella rubella]
          Length = 796

 Score =  403 bits (1036), Expect = e-110
 Identities = 196/335 (58%), Positives = 255/335 (76%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HNV+ GM+KK + + PNIV+YTTL+RGYC KQ++DEAL VF +M+ RGLKPN +TYNTLI
Sbjct: 345  HNVLNGMMKKATHVHPNIVSYTTLVRGYCMKQDLDEALLVFHQMLCRGLKPNAVTYNTLI 404

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GL  A+R+++IK +L         F PD+CTFN LI  +C   +L   MK+F++M+ +K
Sbjct: 405  KGLSVAQRYDEIKVILNGGGDAFTSFAPDACTFNILIKVHCDSGHLDAAMKVFQEMVNIK 464

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            + PDS +YSVLIR+ C    F++AE LF+EL +K+VLL  DGC P  A+Y P+F+YLC N
Sbjct: 465  LHPDSASYSVLIRTLCLRNEFDRAELLFKELFDKQVLLGKDGCKPLSAAYNPMFEYLCAN 524

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT++A+K+FRQLM+RG QD P+++TLIMGHC+EG  KA +ELLV MLRRDFVPD ETYE
Sbjct: 525  GKTKQAEKIFRQLMKRGAQDPPSYRTLIMGHCREGQFKAAYELLVLMLRRDFVPDPETYE 584

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             LIDGLL+ G A LAHDTL++ML+SS+ P  + FH +L ELV    A ESFGLV LMLEK
Sbjct: 585  LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATVFHSVLSELVKRKFANESFGLVTLMLEK 644

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
            +IRQNI++ST  VRLLF +  +EKAF I+  LY+N
Sbjct: 645  RIRQNIDLSTYAVRLLFSSAQKEKAFLIVRLLYDN 679



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 6/260 (2%)
 Frame = +2

Query: 62  YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
           + +LIR Y       E++ +F  M   G+ P+ +T+N L+  L +  R     ++  E  
Sbjct: 222 FNSLIRSYGNAGLFQESVKLFQTMKKMGISPSVVTFNILLSILLKRGRTAMAHDLFDEMR 281

Query: 242 GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
               G  PDS TFN LI+ +CK   + +  ++F++M      PD  TY+ +I   C  G 
Sbjct: 282 -RTYGVSPDSFTFNILISGFCKNSMVDEAFRVFKEMELYHCDPDVVTYNTIIDGLCRAGK 340

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
              A  +   + +K   +      P + SY  + +  C     ++A  VF Q++ RG + 
Sbjct: 341 VRIAHNVLNGMMKKATHVH-----PNIVSYTTLVRGYCMKQDLDEALLVFHQMLCRGLKP 395

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFM-----LRRDFVPDLETYESLIDGLLRSGHANL 763
           +  T+ TLI G      A+   E+ V +         F PD  T+  LI     SGH + 
Sbjct: 396 NAVTYNTLIKG---LSVAQRYDEIKVILNGGGDAFTSFAPDACTFNILIKVHCDSGHLDA 452

Query: 764 AHDTLEKMLKSSHSPGTSTF 823
           A    ++M+     P ++++
Sbjct: 453 AMKVFQEMVNIKLHPDSASY 472



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 4/246 (1%)
 Frame = +2

Query: 110 ALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFSGGNEGFVP-DSCTFNT 286
           AL  FD +   G    + ++  ++  L  AR     +  L      + G V      FN+
Sbjct: 165 ALRFFDWVSNNGFSHKEHSFFLMLELLGRARNLNIARNFLFSIEKRSNGCVKLHDRYFNS 224

Query: 287 LINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKE 466
           LI +Y       + +K+F+ M ++ + P   T+++L+    + G    A  LF E+    
Sbjct: 225 LIRSYGNAGLFQESVKLFQTMKKMGISPSVVTFNILLSILLKRGRTAMAHDLFDEMR--- 281

Query: 467 VLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQL-MRRGTQDVPTFKTLIMGHCKE 643
              R  G +P   ++  +    C+N   ++A +VF+++ +     DV T+ T+I G C+ 
Sbjct: 282 ---RTYGVSPDSFTFNILISGFCKNSMVDEAFRVFKEMELYHCDPDVVTYNTIIDGLCRA 338

Query: 644 GTAKAGHELLVFMLRR--DFVPDLETYESLIDGLLRSGHANLAHDTLEKMLKSSHSPGTS 817
           G  +  H +L  M+++     P++ +Y +L+ G       + A     +ML     P   
Sbjct: 339 GKVRIAHNVLNGMMKKATHVHPNIVSYTTLVRGYCMKQDLDEALLVFHQMLCRGLKPNAV 398

Query: 818 TFHRIL 835
           T++ ++
Sbjct: 399 TYNTLI 404


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355497542|gb|AES78745.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  397 bits (1020), Expect = e-108
 Identities = 192/335 (57%), Positives = 258/335 (77%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HN++ GM KK  DL P++VTYTTLIRGYC KQE+DEAL + +EM  RGLKPN +TYNTLI
Sbjct: 281  HNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLI 340

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA++++K+KE+L++  G   G +PD+CTFNTLIN++C   NL +  K+FE M +L+
Sbjct: 341  KGLCEAQKWDKMKEILEQMKGDG-GSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLE 399

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            V  DS +YSVLIR+ C+ G++ KAE LF EL EKE+LL + G  P  ASY  +F+YLCEN
Sbjct: 400  VSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCEN 459

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA++V RQLM+RGTQD  +++ +I+GHCKEG+ + G+ LLV+MLRRDF+PD++ Y+
Sbjct: 460  GKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYD 519

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             LIDG LR     LA +TLEKMLKSS+ P TST+H IL  L+  GC  ES G++++MLE+
Sbjct: 520  YLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLER 579

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
             IRQNIN ST+ ++LLF  GLQ+KAF+I   +Y+N
Sbjct: 580  NIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKN 614



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
 Frame = +2

Query: 62   YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
            + +LIR Y       E++ +F+ M   G+ P  +T+N+++  L +  R    KEV  E  
Sbjct: 158  FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217

Query: 242  GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
                G  PD+ T+N LI  +CK   + +G   F++M      PD  TY+ L+   C  G 
Sbjct: 218  K-TYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK 276

Query: 422  FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRRGTQ- 598
             + A  L   +S+K         +P V +Y  + +  C   + ++A  +  ++  RG + 
Sbjct: 277  IKVAHNLVNGMSKK-----CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKP 331

Query: 599  DVPTFKTLIMGHCKEGTAKAGHELLVFML-RRDFVPDLETYESLIDGLLRSGHANLAHDT 775
            ++ T+ TLI G C+        E+L  M      +PD  T+ +LI+    +G+ + A   
Sbjct: 332  NIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKV 391

Query: 776  LEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINIST 931
             E M K   S  ++++  ++  L   G     +G   ++ ++   + I +S+
Sbjct: 392  FENMKKLEVSADSASYSVLIRTLCQKG----DYGKAEMLFDELFEKEILLSS 439



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 7/242 (2%)
 Frame = +2

Query: 251 EGFVPDSCTFNTLINAYCKERNLTQGMKIF---EKMLELKVQPDSTTYSVLIRSFCEIGN 421
           +GF  +  T+  ++    +E+NL          EK    +V+ +   ++ LIRS+ E G 
Sbjct: 111 KGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGL 170

Query: 422 FEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRR-GTQ 598
           F+++ +LF+        ++  G +P V ++  +   L + G+T  A +V+ ++++  G +
Sbjct: 171 FKESVKLFEN-------MKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVK 223

Query: 599 -DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLRSGHANLAHDT 775
            D  T+  LI G CK      G      M   D  PD+ TY +L+DGL R+G   +AH+ 
Sbjct: 224 PDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNL 283

Query: 776 LEKMLKSSH--SPGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINISTETVRLL 949
           +  M K     SP   T+      L+   C  +     + +LE+   + +  +  T   L
Sbjct: 284 VNGMSKKCKDLSPDVVTY----TTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTL 339

Query: 950 FK 955
            K
Sbjct: 340 IK 341


>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cicer arietinum]
          Length = 740

 Score =  394 bits (1012), Expect = e-107
 Identities = 188/335 (56%), Positives = 258/335 (77%)
 Frame = +2

Query: 2    HNVMKGMLKKGSDLMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 181
            HN++ GM KK   L P++VTYTTLIRGYC KQE++EAL + +EM  RGLKPN +TYNTLI
Sbjct: 285  HNLVNGMSKKCGGLSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLI 344

Query: 182  GGLCEARRFEKIKEVLKEFSGGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELK 361
             GLCEA++++K+K++L++  G + G +PD+CTFNTLIN++C   NL +  K+FE M +L+
Sbjct: 345  KGLCEAQKWDKMKDILEQMKG-DSGAIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLQ 403

Query: 362  VQPDSTTYSVLIRSFCEIGNFEKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCEN 541
            V  DS +YSVLIRS C+IGN++KAE LF EL E E+LLR+ G  P  ASY  IF+YLCE+
Sbjct: 404  VSADSASYSVLIRSLCQIGNYDKAEMLFDELFENEILLRSSGPKPLAASYKRIFQYLCEH 463

Query: 542  GKTEKADKVFRQLMRRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYE 721
            GKT+KA++V RQLM+RGTQD  ++KT+I+GHCKEG  + G+ELL++MLRRDF+PD++ Y+
Sbjct: 464  GKTKKAERVLRQLMKRGTQDPLSYKTVILGHCKEGAFENGYELLIWMLRRDFLPDIDIYD 523

Query: 722  SLIDGLLRSGHANLAHDTLEKMLKSSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEK 901
             LIDG L+     LA + LEKM+KSS+ P TST+H +L  L+   C  ES  +++ MLEK
Sbjct: 524  YLIDGFLQKDKPLLAMEALEKMVKSSYQPKTSTWHSVLARLLEKDCVHESASVLVAMLEK 583

Query: 902  KIRQNINISTETVRLLFKNGLQEKAFEIITCLYEN 1006
             IRQNIN+ST+ ++LLF  GLQ++AF+I   +Y+N
Sbjct: 584  NIRQNINLSTKCLQLLFDRGLQDRAFKINELIYKN 618



 Score =  100 bits (250), Expect = 7e-19
 Identities = 87/348 (25%), Positives = 146/348 (41%), Gaps = 39/348 (11%)
 Frame = +2

Query: 62   YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKIKEVLKEFS 241
            + +LIR Y       E++ +F  M + G+ P+ IT+N+++  L    R    KEV  E  
Sbjct: 162  FNSLIRSYGEAGLFKESIKLFQTMKSIGVSPSVITFNSVLLILLRRGRTNMAKEVFDEML 221

Query: 242  GGNEGFVPDSCTFNTLINAYCKERNLTQGMKIFEKMLELKVQPDSTTYSVLIRSFCEIGN 421
                G  PD+ T+N LI  +CK   + +G   F++M      PD  TY+ L+   C  G 
Sbjct: 222  S-TYGVTPDTYTYNILIRGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGK 280

Query: 422  FEKAEQLF---------------------------QELSEKEVLL---RNDGCTPFVASY 511
             + A  L                            QE++E  V+L      G  P + +Y
Sbjct: 281  IKTAHNLVNGMSKKCGGLSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTY 340

Query: 512  APIFKYLCENGKTEKADKVFRQLM--RRGTQDVPTFKTLIMGHCKEGTAKAGHELLVFML 685
              + K LCE  K +K   +  Q+        D  TF TLI  HC  G      ++   M 
Sbjct: 341  NTLIKGLCEAQKWDKMKDILEQMKGDSGAIPDACTFNTLINSHCCAGNLDEAFKVFENMK 400

Query: 686  RRDFVPDLETYESLIDGLLRSGH---ANLAHDTL---EKMLKSS-HSPGTSTFHRILVEL 844
            +     D  +Y  LI  L + G+   A +  D L   E +L+SS   P  +++ RI   L
Sbjct: 401  KLQVSADSASYSVLIRSLCQIGNYDKAEMLFDELFENEILLRSSGPKPLAASYKRIFQYL 460

Query: 845  VHNGCALESFGLVMLMLEKKIRQNINISTETVRLLFKNGLQEKAFEII 988
              +G   ++  ++  ++++  +  ++  T  +    K G  E  +E++
Sbjct: 461  CEHGKTKKAERVLRQLMKRGTQDPLSYKT-VILGHCKEGAFENGYELL 507



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
 Frame = +2

Query: 254 GFVPDSCTFNTLINAYCKERNLTQGMKIF---EKMLELKVQPDSTTYSVLIRSFCEIGNF 424
           GF  +S ++  ++    +E+NL          EK    +V+ +   ++ LIRS+ E G F
Sbjct: 116 GFSHNSQSYFIMLEILGREKNLNVARNFLFSIEKRSNGEVKLEDRFFNSLIRSYGEAGLF 175

Query: 425 EKAEQLFQELSEKEVLLRNDGCTPFVASYAPIFKYLCENGKTEKADKVFRQLMRR--GTQ 598
           +++ +LFQ        +++ G +P V ++  +   L   G+T  A +VF +++     T 
Sbjct: 176 KESIKLFQ-------TMKSIGVSPSVITFNSVLLILLRRGRTNMAKEVFDEMLSTYGVTP 228

Query: 599 DVPTFKTLIMGHCKEGTAKAGHELLVFMLRRDFVPDLETYESLIDGLLRSGHANLAHDTL 778
           D  T+  LI G CK      G      M   +  PD+ TY +L+DGL R+G    AH+ +
Sbjct: 229 DTYTYNILIRGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLV 288

Query: 779 EKMLK--SSHSPGTSTFHRILVELVHNGCALESFGLVMLMLEKKIRQNINISTETVRLLF 952
             M K     SP   T+      L+   C  +     +++LE+   + +  +  T   L 
Sbjct: 289 NGMSKKCGGLSPDVVTY----TTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLI 344

Query: 953 K 955
           K
Sbjct: 345 K 345