BLASTX nr result

ID: Catharanthus23_contig00031034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00031034
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006431869.1| hypothetical protein CICLE_v10003321mg, part...    63   4e-08
ref|XP_002300623.2| hypothetical protein POPTR_0002s00640g [Popu...    63   4e-08
ref|XP_004242003.1| PREDICTED: putative wall-associated receptor...    57   3e-06
ref|XP_002301893.1| kinase family protein [Populus trichocarpa] ...    56   4e-06
gb|ABK93750.1| unknown [Populus trichocarpa]                           56   4e-06

>ref|XP_006431869.1| hypothetical protein CICLE_v10003321mg, partial [Citrus clementina]
           gi|557533991|gb|ESR45109.1| hypothetical protein
           CICLE_v10003321mg, partial [Citrus clementina]
          Length = 346

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -1

Query: 380 KTDVYSIGVLLFVLVTGRKVFEEVVGD-AGANNKPIHVSEYVRDCLVNDQLSQVAVSEIW 204
           K DV+S G+LL VL+TG+K+F+   GD  GA +    +  YV+ C+ N++  ++ V  I 
Sbjct: 241 KCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGH--YWLLHYVKKCIENNEFDEI-VDPII 297

Query: 203 ESDEDRVXXXXXXXXXXXXXLRCTLEKGEDRPHMIEVARKLHQIYK 66
            S+  RV             L C  E  EDRP  ++VA++L QIY+
Sbjct: 298 VSEGPRVGKEKQLQGFRELALMCVCESAEDRPTKVDVAKRLKQIYQ 343


>ref|XP_002300623.2| hypothetical protein POPTR_0002s00640g [Populus trichocarpa]
           gi|550343992|gb|EEE79896.2| hypothetical protein
           POPTR_0002s00640g [Populus trichocarpa]
          Length = 228

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/109 (38%), Positives = 57/109 (52%)
 Frame = -1

Query: 389 VTPKTDVYSIGVLLFVLVTGRKVFEEVVGDAGANNKPIHVSEYVRDCLVNDQLSQVAVSE 210
           VT KTDVYS GVLL VL+TGR   +E           I + +YV+D +  DQ+++V    
Sbjct: 126 VTEKTDVYSFGVLLLVLLTGRITLQE----------RIFLIDYVKDLVEQDQVNEVVDPR 175

Query: 209 IWESDEDRVXXXXXXXXXXXXXLRCTLEKGEDRPHMIEVARKLHQIYKT 63
           I   +                 LRCT   GEDRP MIEVA++L +I ++
Sbjct: 176 I-RGNRGEAIDQQLVEASIELALRCTNGSGEDRPLMIEVAKELQRIERS 223


>ref|XP_004242003.1| PREDICTED: putative wall-associated receptor kinase-like 16-like
           [Solanum lycopersicum]
          Length = 292

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
 Frame = -1

Query: 389 VTPKTDVYSIGVLLFVLVTGRKVFEEVVGDAGANNKP-----------IHVSEYVRDCLV 243
           +T KTDVYS G+LLF L+TG+ V++ ++        P            +V  YVR+  V
Sbjct: 173 ITQKTDVYSFGILLFQLLTGKDVYDIMIRVRDIELVPTLNYIDRVKNATNVDRYVREDNV 232

Query: 242 NDQLSQVAVSEIWESDEDRVXXXXXXXXXXXXXLRCTLEKGEDRPHMIEVARKLHQIYKT 63
            D      + ++   +E  +              +CT +KG+DRP+MI VAR+L ++ K+
Sbjct: 233 LD------IVDLTILEEHGIEIEQPLKDYLDLAKKCTADKGDDRPYMIHVARELCRMEKS 286


>ref|XP_002301893.1| kinase family protein [Populus trichocarpa]
           gi|222843619|gb|EEE81166.1| kinase family protein
           [Populus trichocarpa]
          Length = 323

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/109 (34%), Positives = 56/109 (51%)
 Frame = -1

Query: 389 VTPKTDVYSIGVLLFVLVTGRKVFEEVVGDAGANNKPIHVSEYVRDCLVNDQLSQVAVSE 210
           VT KTDV+S GVLL VL+TGR                IH+ E+V+  +  D++ + AV  
Sbjct: 221 VTEKTDVFSFGVLLLVLLTGR----------ATRQGEIHLIEHVKLLVEQDRVHE-AVDP 269

Query: 209 IWESDEDRVXXXXXXXXXXXXXLRCTLEKGEDRPHMIEVARKLHQIYKT 63
           +   +                 LRCT + GEDRP MIEVA+++ +I ++
Sbjct: 270 MIRGNGGEAIDQQQLEASIELALRCTDDSGEDRPLMIEVAKEIQRIERS 318


>gb|ABK93750.1| unknown [Populus trichocarpa]
          Length = 107

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/109 (34%), Positives = 56/109 (51%)
 Frame = -1

Query: 389 VTPKTDVYSIGVLLFVLVTGRKVFEEVVGDAGANNKPIHVSEYVRDCLVNDQLSQVAVSE 210
           VT KTDV+S GVLL VL+TGR                IH+ E+V+  +  D++ + AV  
Sbjct: 5   VTEKTDVFSFGVLLLVLLTGR----------ATRQGEIHLIEHVKLLVEQDRVHE-AVDP 53

Query: 209 IWESDEDRVXXXXXXXXXXXXXLRCTLEKGEDRPHMIEVARKLHQIYKT 63
           +   +                 LRCT + GEDRP MIEVA+++ +I ++
Sbjct: 54  MIRGNGGEAIDQQQLEASIELALRCTDDSGEDRPLMIEVAKEIQRIERS 102


Top