BLASTX nr result

ID: Catharanthus23_contig00030927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030927
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ11784.1| dehydration responsive protein [Corchorus olitor...    63   5e-08
dbj|BAJ11783.1| dehydration responsive protein [Corchorus capsul...    59   7e-07
emb|CBA31924.1| hypothetical protein Csp_D29550 [Curvibacter put...    59   9e-07
gb|ABM53544.1| conserved hypothetical protein [uncultured beta p...    58   1e-06
dbj|BAJ11779.1| dehydration responsive protein [Corchorus tridens]     55   7e-06
dbj|BAJ11781.1| dehydration responsive protein [Corchorus pseudo...    55   7e-06
emb|CCG94050.1| hypothetical protein MARHY0556 [Marinobacter hyd...    55   1e-05

>dbj|BAJ11784.1| dehydration responsive protein [Corchorus olitorius]
          Length = 215

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/82 (52%), Positives = 48/82 (58%)
 Frame = +2

Query: 14  ESAPKARQRCVADGKQVNIPVPINSAMWGRRRLAQPTVGYVGSSL*SCLVGKSAGLR*GV 193
           ESAPKARQRCVADGKQVNIP P   AM GR     PTVG V       L    A      
Sbjct: 53  ESAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPTVGIVSFWFKKVLRQIRARNSRDR 112

Query: 194 ITRLLAAEVSDTLLPGKATKLQ 259
             RL AA+ S+ ++P KA+KLQ
Sbjct: 113 DERLYAAKQSE-VVPRKASKLQ 133


>dbj|BAJ11783.1| dehydration responsive protein [Corchorus capsularis]
          Length = 53

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/41 (73%), Positives = 30/41 (73%)
 Frame = +2

Query: 17  SAPKARQRCVADGKQVNIPVPINSAMWGRRRLAQPTVGYVG 139
           SAPKARQRCVADGKQVNIP P   AM GR     PTVG VG
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPTVGIVG 41


>emb|CBA31924.1| hypothetical protein Csp_D29550 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 77

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 81 IGTGILTCFPSATHLCLALGADSLYAD 1
          +GTGILTCFPSATHLCLALGADSLYAD
Sbjct: 1  MGTGILTCFPSATHLCLALGADSLYAD 27


>gb|ABM53544.1| conserved hypothetical protein [uncultured beta proteobacterium
          CBNPD1 BAC clone 578]
          Length = 109

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 84 LIGTGILTCFPSATHLCLALGADSLYAD 1
          +IGTGILTCFPSATHLCLALGADS YAD
Sbjct: 1  MIGTGILTCFPSATHLCLALGADSPYAD 28


>dbj|BAJ11779.1| dehydration responsive protein [Corchorus tridens]
          Length = 53

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = +2

Query: 17  SAPKARQRCVADGKQVNIPVPINSAMWGRRRLAQPTVGYVG 139
           SAPKARQRCVADGKQVNIP P   AM GR     P VG  G
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPAVGIAG 41


>dbj|BAJ11781.1| dehydration responsive protein [Corchorus pseudo-olitorius]
          Length = 54

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/38 (73%), Positives = 28/38 (73%)
 Frame = +2

Query: 17  SAPKARQRCVADGKQVNIPVPINSAMWGRRRLAQPTVG 130
           SAPKARQRCVADGKQVNIP P   AM GR     PTVG
Sbjct: 1   SAPKARQRCVADGKQVNIPAPSYDAMGGRIAEGCPTVG 38


>emb|CCG94050.1| hypothetical protein MARHY0556 [Marinobacter hydrocarbonoclasticus
           ATCC 49840]
          Length = 60

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/57 (56%), Positives = 36/57 (63%)
 Frame = -3

Query: 171 DLPTRHDYRLEPTYPTVG*ANLLRPHIALLIGTGILTCFPSATHLCLALGADSLYAD 1
           DLP    Y L+P  P+ G  +LLR  IA + GTGILT FPS T   LALGADS  AD
Sbjct: 4   DLPKSTPYMLKPGQPSPGSPSLLRLSIAAIQGTGILTRFPSTTPFGLALGADSPCAD 60


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