BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030826
         (541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   204   1e-50
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   9e-50
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   192   4e-47
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   192   5e-47
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   172   6e-41
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   172   6e-41
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   170   2e-40
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...   169   4e-40
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus...   164   9e-39
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]   159   3e-37
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...   157   2e-36
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   157   2e-36
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...   152   4e-35
ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutr...   146   3e-33
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   146   3e-33
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...   140   1e-31
dbj|BAK06737.1| predicted protein [Hordeum vulgare subsp. vulgare]    136   3e-30
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...   133   2e-29
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...   132   5e-29
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...   130   2e-28

>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           [Solanum tuberosum]
          Length = 1179

 Score =  204 bits (518), Expect = 1e-50
 Identities = 98/131 (74%), Positives = 113/131 (86%)
 Frame = +3

Query: 141 HLMKEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEV 320
           HL+ EKDY+AL +LF HHIESFDYMVD GLE ML NIKP+EI +S ++ KL+I F KPE+
Sbjct: 13  HLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPEL 72

Query: 321 YPPQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIML 500
           +PPQKERA +T+ D LYPFECRQAK+SYTGKFLV+ICFQYGD  V +REK NFGQFPIML
Sbjct: 73  FPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAV-IREKFNFGQFPIML 131

Query: 501 KSKLCHLRGAD 533
           KSKLCHLRGAD
Sbjct: 132 KSKLCHLRGAD 142


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
           lycopersicum]
          Length = 1184

 Score =  201 bits (511), Expect = 9e-50
 Identities = 97/131 (74%), Positives = 112/131 (85%)
 Frame = +3

Query: 141 HLMKEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEV 320
           HL+ EKDY+AL +LF HHIESFDYMVD GLE ML NIKP+EI +S ++ KL+I F KPE+
Sbjct: 18  HLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPEL 77

Query: 321 YPPQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIML 500
           +PPQKERA + + D LYPFECRQAKISY+GKFLV+ICFQYGD  V +REK NFGQFPIML
Sbjct: 78  FPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAV-IREKFNFGQFPIML 136

Query: 501 KSKLCHLRGAD 533
           KSKLCHLRGAD
Sbjct: 137 KSKLCHLRGAD 147


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score =  192 bits (488), Expect = 4e-47
 Identities = 89/130 (68%), Positives = 110/130 (84%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           + +DY AL +LFRHHIESFD++VD GLE ++N+IKPVEI++S TN+KL+I   KPE+YPP
Sbjct: 7   ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 330 QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSK 509
           QKER +RT+ + L P+ECRQAKISYTGKF+ ++CFQY DEK  +REK NFGQFPIMLKSK
Sbjct: 67  QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQY-DEKAVIREKLNFGQFPIMLKSK 125

Query: 510 LCHLRGADTK 539
           LCHLRG D K
Sbjct: 126 LCHLRGLDPK 135


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  192 bits (487), Expect = 5e-47
 Identities = 89/130 (68%), Positives = 110/130 (84%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           + +DY AL +LFRHHIESFD++VD GLE ++N+IKPVEI++S TN+KL+I   KPE+YPP
Sbjct: 7   ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 330 QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSK 509
           QKER +RT+ + L P+ECRQAKISYTGKF+ ++CFQY DEK  +REK NFGQFPIMLKSK
Sbjct: 67  QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQY-DEKAVIREKFNFGQFPIMLKSK 125

Query: 510 LCHLRGADTK 539
           LCHLRG D K
Sbjct: 126 LCHLRGLDPK 135


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Glycine max]
          Length = 1151

 Score =  172 bits (435), Expect = 6e-41
 Identities = 79/125 (63%), Positives = 100/125 (80%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 338
           D+ AL +LF+HHIESFDYMVD GL+ ML +IKPVE+F+  T+ KL+I  + P +YPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 339 RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 518
           R  RT+ + L PFECRQAKISY+GK  +++CFQY D  + +RE  NFGQFPIML+SKLC+
Sbjct: 70  RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPI-IRENVNFGQFPIMLQSKLCN 128

Query: 519 LRGAD 533
           LRGAD
Sbjct: 129 LRGAD 133


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X1 [Glycine max]
          Length = 1175

 Score =  172 bits (435), Expect = 6e-41
 Identities = 79/125 (63%), Positives = 100/125 (80%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 338
           D+ AL +LF+HHIESFDYMVD GL+ ML +IKPVE+F+  T+ KL+I  + P +YPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 339 RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 518
           R  RT+ + L PFECRQAKISY+GK  +++CFQY D  + +RE  NFGQFPIML+SKLC+
Sbjct: 70  RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPI-IRENVNFGQFPIMLQSKLCN 128

Query: 519 LRGAD 533
           LRGAD
Sbjct: 129 LRGAD 133


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Glycine max]
          Length = 1175

 Score =  170 bits (431), Expect = 2e-40
 Identities = 78/125 (62%), Positives = 98/125 (78%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 338
           D+ AL +LF+HHIESFDYM D GLE ML +IKP+E+F+  T+ KL+I  + P +YPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 339 RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 518
           R  RT+ + L PFECRQAKISY GK  +++CFQY D  + +RE  NFGQFPIML+SKLC+
Sbjct: 70  RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPI-IRENINFGQFPIMLQSKLCN 128

Query: 519 LRGAD 533
           LRGAD
Sbjct: 129 LRGAD 133


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  169 bits (428), Expect = 4e-40
 Identities = 78/123 (63%), Positives = 101/123 (82%)
 Frame = +3

Query: 171 LADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKERAMR 350
           L +LF+HHIESFDYM+D+GL++ML  +KPV+IF+SS+N+ L+I  + PEVYPPQK+R+ +
Sbjct: 21  LKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKDRSSK 80

Query: 351 TLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCHLRGA 530
           T    LYPFECRQAKISYTG F +++CFQ+ D  V VREK NFG+FPIMLKSK C+LR A
Sbjct: 81  TSAGALYPFECRQAKISYTGSFHIDVCFQW-DGGVVVREKLNFGEFPIMLKSKRCYLREA 139

Query: 531 DTK 539
           D +
Sbjct: 140 DPR 142


>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  164 bits (416), Expect = 9e-39
 Identities = 78/127 (61%), Positives = 96/127 (75%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 338
           D+ AL +LF+HHIESFD+MV  GLE  L +IKP+E+ +  T  KL+I  E P VYPPQKE
Sbjct: 10  DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKE 69

Query: 339 RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 518
           R  +T+ + L PFECRQAKISY GK  +++CFQY D  V +RE  NFGQFPIML+SKLC+
Sbjct: 70  RISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPV-IRENVNFGQFPIMLQSKLCN 128

Query: 519 LRGADTK 539
           LRGAD K
Sbjct: 129 LRGADPK 135


>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
          Length = 416

 Score =  159 bits (403), Expect = 3e-37
 Identities = 77/130 (59%), Positives = 100/130 (76%), Gaps = 5/130 (3%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTN-----QKLKISFEKPEVY 323
           DY  L +LF+HHI+SFD++V+ GLE +L ++KPVE    + N      ++ + F +PE+Y
Sbjct: 7   DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPELY 66

Query: 324 PPQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLK 503
           PPQKER+ RT+ D LYPFECRQAKISY+GK L ++CFQYG+  V +REK N GQFP+MLK
Sbjct: 67  PPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGN-GVVIREKFNLGQFPMMLK 125

Query: 504 SKLCHLRGAD 533
           SKLCHLRGAD
Sbjct: 126 SKLCHLRGAD 135


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X2 [Citrus sinensis]
          Length = 954

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/131 (56%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           K  D+  L +L RHHIESFDYM+D+GL  M +++K V + +S TN++LKIS   PE++PP
Sbjct: 5   KSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPP 64

Query: 330 QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDE-KVKVREKTNFGQFPIMLKS 506
           QKE+  +TL D L PFECRQAKISYTGK + ++ FQY D     VRE+ NFGQFP+MLK+
Sbjct: 65  QKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKT 124

Query: 507 KLCHLRGADTK 539
           + CHL+GAD++
Sbjct: 125 RRCHLQGADSQ 135


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/131 (56%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           K  D+  L +L RHHIESFDYM+D+GL  M +++K V + +S TN++LKIS   PE++PP
Sbjct: 5   KSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPP 64

Query: 330 QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDE-KVKVREKTNFGQFPIMLKS 506
           QKE+  +TL D L PFECRQAKISYTGK + ++ FQY D     VRE+ NFGQFP+MLK+
Sbjct: 65  QKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKT 124

Query: 507 KLCHLRGADTK 539
           + CHL+GAD++
Sbjct: 125 RRCHLQGADSQ 135


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
           gi|557093303|gb|ESQ33885.1| hypothetical protein
           EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score =  152 bits (385), Expect = 4e-35
 Identities = 72/131 (54%), Positives = 93/131 (70%), Gaps = 1/131 (0%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           K +D+T L +L  HHIESFDYM ++GL +M + IKPV ++  ST +KL I  E P VY P
Sbjct: 13  KIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSP 72

Query: 330 QKERAMRTL-PDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKS 506
           QKE    T   + L+PFECRQAKISYTG  +  ICF+Y +++  VR++  FG+FPIML S
Sbjct: 73  QKESLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMS 132

Query: 507 KLCHLRGADTK 539
           KLCHLRGAD +
Sbjct: 133 KLCHLRGADCR 143


>ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum]
           gi|557093304|gb|ESQ33886.1| hypothetical protein
           EUTSA_v10006600mg [Eutrema salsugineum]
          Length = 1181

 Score =  146 bits (369), Expect = 3e-33
 Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           K +D+  L +L  HHIESFDYM ++GL +M N IKPV +++S    KL I  + P VYPP
Sbjct: 11  KLEDFKELHNLVTHHIESFDYMTEKGLAVMFNRIKPVSVYDSGN--KLSIWLDNPVVYPP 68

Query: 330 QKERAMRTL-PDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKS 506
           QKE    T   + L+PFECRQAKISYTGK +  +C QY DE   +R+K +FG+ PIML S
Sbjct: 69  QKESPSSTSRQEALFPFECRQAKISYTGKLMAEVCLQYNDEPPVIRDKFDFGELPIMLMS 128

Query: 507 KLCHLRGADTK 539
           KLC+LRGAD +
Sbjct: 129 KLCNLRGADCR 139


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Cicer arietinum]
           gi|502078798|ref|XP_004486058.1| PREDICTED: probable
           DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Cicer arietinum]
          Length = 1177

 Score =  146 bits (369), Expect = 3e-33
 Identities = 71/131 (54%), Positives = 93/131 (70%)
 Frame = +3

Query: 147 MKEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYP 326
           + + ++ AL DL + HIESFD+M+D GL+ M   IKP+E+ + +    LKIS + P+++ 
Sbjct: 12  LDDANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFE 71

Query: 327 PQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKS 506
           PQKER      + LYPFECRQAKISYTG F   +CFQY +  + VREK NFGQFPIML+S
Sbjct: 72  PQKERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPI-VREKFNFGQFPIMLQS 130

Query: 507 KLCHLRGADTK 539
           KLC+LRGA  K
Sbjct: 131 KLCNLRGASPK 141


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
           gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
           [Arabidopsis thaliana]
          Length = 1178

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = +3

Query: 156 KDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQK 335
           +D+  L +L  HHIESFDYM  +GL++M N IKPV +++ +T  +L I  E P V+ PQK
Sbjct: 14  EDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQK 73

Query: 336 ERAMRT-LPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKL 512
           E    T   + L PFECRQAKISYTG F+ ++CF+Y D  V VR+K +FGQFPIML SKL
Sbjct: 74  ESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYND-GVVVRDKFDFGQFPIMLMSKL 132

Query: 513 CHLRGADTK 539
           C L+GAD +
Sbjct: 133 CSLKGADCR 141


>dbj|BAK06737.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 978

 Score =  136 bits (343), Expect = 3e-30
 Identities = 69/130 (53%), Positives = 91/130 (70%)
 Frame = +3

Query: 150 KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 329
           KE+DY  L +L+R HIESFDY +D+GL+ ML +I+P+EI + S+N  L++S EK  V PP
Sbjct: 17  KEEDYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITHPSSNTTLRMSLEKGHVLPP 76

Query: 330 QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSK 509
            K+     L   LYP ECRQ +ISY+G+F V   FQ+ D    +R+  NFGQ PIML SK
Sbjct: 77  MKD---GRLGQPLYPQECRQGRISYSGEFKVEAVFQFND-GAPIRQTFNFGQLPIMLMSK 132

Query: 510 LCHLRGADTK 539
           LCHLRGAD++
Sbjct: 133 LCHLRGADSR 142


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
           lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
           ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score =  133 bits (335), Expect = 2e-29
 Identities = 69/136 (50%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
 Frame = +3

Query: 156 KDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLK-------ISFEKP 314
           +D   L +L  HHIESFDYM  +GL++M N IKPV +++ +T  +L        +  E P
Sbjct: 14  EDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLENP 73

Query: 315 EVYPPQKERAMRT-LPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFP 491
            V+ PQKE    T   + L PFECRQAKISYTG F+ ++CF+Y D  V VR++ +FGQFP
Sbjct: 74  VVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYND-GVVVRDRFDFGQFP 132

Query: 492 IMLKSKLCHLRGADTK 539
           IML SKLC LRGAD +
Sbjct: 133 IMLMSKLCSLRGADCR 148


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
           [Fragaria vesca subsp. vesca]
          Length = 1171

 Score =  132 bits (332), Expect = 5e-29
 Identities = 71/126 (56%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISF-EKPEVYPPQK 335
           D   L +LFRHHIESFDY+V  GL +ML +IKPV++ N  T + L+I F + P +  P K
Sbjct: 14  DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 73

Query: 336 ERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLC 515
           +R+     + LYPFECRQ +ISYTGK L +I FQ GD K  VRE+ NFGQFPIML SK C
Sbjct: 74  DRS----TEPLYPFECRQTRISYTGKLLADIYFQRGD-KAPVREQFNFGQFPIMLMSKCC 128

Query: 516 HLRGAD 533
           +LRG D
Sbjct: 129 NLRGHD 134


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
           [Fragaria vesca subsp. vesca]
          Length = 1169

 Score =  130 bits (327), Expect = 2e-28
 Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +3

Query: 159 DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISF-EKPEVYPPQK 335
           D   L +LFRHHI+SFDY++  GL +ML +IKPV++ N  T + L+I F + P +  P K
Sbjct: 12  DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71

Query: 336 ERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLC 515
           +R+     + LYPFECRQ +ISYTGK L +I FQ GD K  VRE+ NFGQFPIML SK C
Sbjct: 72  DRS----SEPLYPFECRQTRISYTGKLLADIYFQRGD-KAPVREQFNFGQFPIMLMSKCC 126

Query: 516 HLRGAD 533
           +LRG D
Sbjct: 127 NLRGHD 132