BLASTX nr result
ID: Catharanthus23_contig00030777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030777
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 77 2e-12
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 72 1e-10
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 66 5e-09
ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, part... 65 1e-08
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 64 2e-08
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 64 2e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 61 2e-07
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 60 2e-07
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 60 3e-07
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 60 3e-07
gb|ABE65413.1| hypothetical protein At1g62890 [Arabidopsis thali... 60 4e-07
dbj|BAA77394.1| SAE1-S9-protein [Brassica rapa] 60 4e-07
gb|ABK28152.1| unknown [Arabidopsis thaliana] 60 4e-07
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606... 60 4e-07
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 60 4e-07
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript... 59 5e-07
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 59 9e-07
gb|ABK28243.1| unknown [Arabidopsis thaliana] 59 9e-07
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 59 9e-07
ref|XP_006586315.1| PREDICTED: uncharacterized protein LOC102664... 58 1e-06
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*VD*TCKICNQMEDIHSYLFFSCPF 63
W I+WN + K SFILWLA RL ++R +FL C +C + H++LFFSC
Sbjct: 287 WSSIIWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFFSCRT 346
Query: 62 VKEVWRHIREWLGLKR 15
VW HIR+W+ LKR
Sbjct: 347 SLRVWAHIRDWIPLKR 362
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*VD*TCKICNQMEDIHSYLFFSCPF 63
W+ +VWN K SFILWLA L T++R +FL C +C H++LFFSC
Sbjct: 316 WNSVVWNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRTKAKSHAHLFFSCRI 375
Query: 62 VKEVWRHIREWLGLKR 15
+VW +IR+W+ L R
Sbjct: 376 SLQVWANIRDWIPLHR 391
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSF--L*VD*TCKICNQMEDIHSYLFFSC 69
W++ VW + +PK +F +WLAV RL T +R++ + VD TC +CN+ + +LFFSC
Sbjct: 305 WYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSC 364
Query: 68 PFVKEVW 48
PF E+W
Sbjct: 365 PFATEIW 371
>ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, partial [Populus
trichocarpa] gi|550329025|gb|ERP55952.1| hypothetical
protein POPTR_0010s04250g, partial [Populus trichocarpa]
Length = 112
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*VD*TCKICNQMEDIHSYLFFSCPF 63
W +VW LP+ +F LWL +G+L T +RL F+ D +C+ + H++LFFSC +
Sbjct: 29 WASVVWEQWFLPRHNFSLWL--LGKLRTRDRLQFISTDPLYPLCHNSSESHAHLFFSCAW 86
Query: 62 VKEVWRHIREWLGLKRSMST 3
+W R WL SM T
Sbjct: 87 SSSLWGKARYWLEFHSSMPT 106
>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = -3
Query: 245 IWHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*VD*TCKICNQMEDIHSYLFFSCP 66
+WH VW +P++SFI+WLAV +L T R+ V+ C C + ++ +LFF+CP
Sbjct: 80 LWHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQPCVFCRERDESRDHLFFACP 139
Query: 65 FVKEVWRHIREWLGLKRSMS 6
F +W + L L+R ++
Sbjct: 140 FTYSIWSELTSRL-LRRKLN 158
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*V--D*TCKICNQMEDIHSYLFFSC 69
W IVW + +P+ +F+ W ++ RLPT +RL + D TC++C+ ++ H +LFF C
Sbjct: 428 WSSIVWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGC 487
Query: 68 PFVKEVWRHIRE 33
+ +WRH E
Sbjct: 488 TYASHLWRHFGE 499
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = -3
Query: 245 IWHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*VD*T--CKICNQMEDIHSYLFFS 72
+W R++ N+ PK FILWLA++ RL T ER+S D + CK+C + +LFF+
Sbjct: 959 VWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFN 1018
Query: 71 CPFVKEVWRHIREWLGLK 18
C + KE+W + +L L+
Sbjct: 1019 CIYSKEIWGKVLLYLNLQ 1036
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*VD--*TCKICNQMEDIHSYLFFSC 69
W++ VW + PK+SF+LWL V RL T +R+ TC +CN E+ +LFFSC
Sbjct: 1354 WYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSC 1413
Query: 68 PFVKEVWRHIREWL 27
+ VW + + L
Sbjct: 1414 QYTSYVWEALTQRL 1427
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -3
Query: 245 IWHRIVWNSINLPKFSFILWLAVMGRLPTMERLS--FL*VD*TCKICNQMEDIHSYLFFS 72
+WH+ VW ++PK +FI W+ RL T +RL + TC +CN +++ +LFF
Sbjct: 985 LWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFR 1044
Query: 71 CPFVKEVWRHIREWLGL 21
C F E+W L L
Sbjct: 1045 CQFSSEIWSFFMRALNL 1061
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSF--L*VD*TCKICNQMEDIHSYLFFSC 69
W + VW +PK +FI W+A RL T +RL+ L + C +CN +++ H +LFF C
Sbjct: 154 WQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQC 213
Query: 68 PFVKEVW 48
F E+W
Sbjct: 214 QFSNEIW 220
>gb|ABE65413.1| hypothetical protein At1g62890 [Arabidopsis thaliana]
Length = 195
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*V--D*TCKICNQMEDIHSYLFFSC 69
W++ VW + PK+SF+LWL + RL T + + TC +C E+ + LFFSC
Sbjct: 21 WYKGVWFPYSTPKYSFLLWLTIQNRLSTGDHIKAWNSGQQVTCTLCGNAEETRNLLFFSC 80
Query: 68 PFVKEVWRHIREWL 27
+ EVWR + + L
Sbjct: 81 HYTSEVWRTLTQRL 94
>dbj|BAA77394.1| SAE1-S9-protein [Brassica rapa]
Length = 255
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSF--L*VD*TCKICNQMEDIHSYLFFSC 69
WH V +P+ +FI WLA++ RLPT +RL L V +C +CN + HS+LFF C
Sbjct: 128 WHSTVGFKEEVPRCTFITWLAMLERLPTRDRLISWGLTVPNSCVLCNGGVESHSHLFFEC 187
Query: 68 PFVKEVWRH 42
F VW H
Sbjct: 188 SFAVGVWLH 196
>gb|ABK28152.1| unknown [Arabidopsis thaliana]
Length = 196
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*V--D*TCKICNQMEDIHSYLFFSC 69
W++ VW + PK+SF+LWL + RL T + + TC +C E+ + LFFSC
Sbjct: 21 WYKGVWFPYSTPKYSFLLWLTIQNRLSTGDHIKAWNSGQQVTCTLCGNAEETRNLLFFSC 80
Query: 68 PFVKEVWRHIREWL 27
+ EVWR + + L
Sbjct: 81 HYTSEVWRTLTQRL 94
>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
orf147a [Beta vulgaris subsp. vulgaris]
Length = 147
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -3
Query: 236 RIVWNSINLPKFSFILWLAVMGRLPTMERLSFL*V--D*TCKICNQMEDIHSYLFFSCPF 63
+++ N+ + PK +FI WL ++ RL T +RL + D C +C +++ +LFF C F
Sbjct: 3 QMLCNNFSPPKCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEF 62
Query: 62 VKEVWRHIREWLGLKRS 12
E+W + WLG++R+
Sbjct: 63 SYEIWSSLLCWLGIQRT 79
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSF--L*VD*TCKICNQMEDIHSYLFFSC 69
WH+ VW + + PKFSF +WLAV RL T +++ + TC +C + +LFFSC
Sbjct: 1282 WHKGVWFTHSTPKFSFCVWLAVYDRLSTGDKMLLWNRGLQGTCLLCRNATESRDHLFFSC 1341
Query: 68 PFVKEVW 48
F EVW
Sbjct: 1342 SFSSEVW 1348
>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 320
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSF--L*VD*TCKICNQMEDIHSYLFFSC 69
W++ VW ++PK +FI W+ RL T +RL L + C +CN ++ ++LFF C
Sbjct: 151 WYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFEC 210
Query: 68 PFVKEVWR 45
PF VWR
Sbjct: 211 PFCGAVWR 218
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 332
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLS--FL*VD*TCKICNQMEDIHSYLFFSC 69
WH+ VW ++PK +FI W+ RL T +RL L + C +CN +D ++LFF C
Sbjct: 129 WHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFEC 188
Query: 68 PFVKEVWR 45
F VWR
Sbjct: 189 QFSGVVWR 196
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLS--FL*VD*TCKICNQMEDIHSYLFFSC 69
WH+ VW ++PK +FI W+ RL T +RL L + C +CN +D ++LFF C
Sbjct: 129 WHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFEC 188
Query: 68 PFVKEVWR 45
F VWR
Sbjct: 189 QFSGVVWR 196
>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
Length = 296
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLS--FL*VD*TCKICNQMEDIHSYLFFSC 69
WH+ VW ++PK +FI W+ RL T +RL L + C +CN +D ++LFF C
Sbjct: 129 WHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFEC 188
Query: 68 PFVKEVWR 45
F VWR
Sbjct: 189 QFSGVVWR 196
>ref|XP_006586315.1| PREDICTED: uncharacterized protein LOC102664837 [Glycine max]
Length = 97
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = -3
Query: 242 WHRIVWNSINLPKFSFILWLAVMGRLPTMERLSF--L*VD*TCKICNQMEDIHSYLFFSC 69
W + + + P+ S WLA GRL T +RL L + C +CN++++ H +LFF+C
Sbjct: 10 WRHLFYRNYARPRASHTTWLACHGRLATKDRLCRFGLIQEKICSLCNEVDESHDHLFFAC 69
Query: 68 PFVKEVWRHIREWLGLKRS 12
K+VW + W+ + S
Sbjct: 70 SESKKVWSEVLNWIDCQHS 88