BLASTX nr result
ID: Catharanthus23_contig00030594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030594
(312 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Ja... 105 6e-21
gb|ADC55379.1| gag-pol polyprotein [Oryza brachyantha] 105 6e-21
emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group] 105 8e-21
gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group] 104 1e-20
gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
gb|AAN05526.1| polyprotein [Oryza sativa Japonica Group] 103 2e-20
gb|ABG66123.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group] 103 2e-20
gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|1087... 103 2e-20
gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Jap... 103 2e-20
gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Ja... 103 2e-20
gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group] 103 2e-20
gb|ABA97250.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-... 103 2e-20
gb|AAX95203.1| retrotransposon protein, putative, Ty3-gypsy sub-... 103 2e-20
gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Ja... 103 2e-20
gb|AAM08795.1|AC090486_5 Putative retroelement [Oryza sativa Jap... 103 2e-20
>gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431025|gb|AAP52863.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1714
Score = 105 bits (262), Expect = 6e-21
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVPND ELK IL E+H+++YS+
Sbjct: 1237 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWMGERLCVPNDKELKDLILTEAHQTQYSI 1295
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1296 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1326
>gb|ADC55379.1| gag-pol polyprotein [Oryza brachyantha]
Length = 1393
Score = 105 bits (262), Expect = 6e-21
Identities = 48/89 (53%), Positives = 65/89 (73%)
Frame = +1
Query: 46 NNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSMHP 225
N+ E E K + K DF E +G+++ NRLCVP++ ELK IL+E+H+++YS+HP
Sbjct: 933 NDPEIAELKKNMRVGKARDFSEDE-HGTIWMGNRLCVPDNRELKELILQEAHQTQYSIHP 991
Query: 226 GEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
G KMY+DLK+KFWW MKREIAEYVA+C
Sbjct: 992 GSTKMYQDLKEKFWWVSMKREIAEYVALC 1020
>emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
Length = 1421
Score = 105 bits (261), Expect = 8e-21
Identities = 47/91 (51%), Positives = 65/91 (71%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + +K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1022 QVNDSEIAELKKNMRVRKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1080
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1081 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1111
>gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1495
Score = 104 bits (259), Expect = 1e-20
Identities = 47/91 (51%), Positives = 65/91 (71%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ + RLCVP+D ELK IL E+H+++YS+
Sbjct: 1018 QVNDPEIAELKKNMRVGKARDFHEDE-HGTIWLRERLCVPDDKELKDLILTEAHQTQYSI 1076
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1077 HPGSTKMYQDLKEKFWWASMRREIAEFVALC 1107
>gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1045 QANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1103
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1104 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1134
>gb|AAN05526.1| polyprotein [Oryza sativa Japonica Group]
Length = 1471
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 65/91 (71%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K +DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1207 QVNDPEIAELKKNMRVGKAQDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1265
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1266 HPGSTKMYQDLKEKFWWVNMRREIAEFVALC 1296
>gb|ABG66123.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1291
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 65/91 (71%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K +DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1027 QVNDPEIAELKKNMRVGKAQDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1085
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1086 HPGSTKMYQDLKEKFWWVNMRREIAEFVALC 1116
>gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1850
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1227 QANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1285
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1286 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1316
>gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|108708868|gb|ABF96663.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1760
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1283 QANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1341
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1342 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1372
>gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Japonica Group]
gi|108709291|gb|ABF97086.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1461
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 984 QANDSEIAELKKNMSVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1042
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1043 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1073
>gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Japonica Group]
Length = 1512
Score = 103 bits (258), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1035 QANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1093
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1094 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1124
>gb|AAS90689.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1708
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1231 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1289
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1290 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1320
>gb|ABA97250.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1429
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1026 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1084
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1085 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1115
>gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1672
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1195 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1253
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1254 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1284
>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1687
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1256 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1314
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1315 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1345
>gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1300 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWIGERLCVPDDKELKDLILTEAHQTQYSI 1358
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1359 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1389
>gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548986|gb|ABA91783.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1760
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1283 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILTEAHQTQYSI 1341
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1342 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1372
>gb|AAX95203.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1566
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1351 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWMGERLCVPDDKELKDLILTEAHQTQYSI 1409
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1410 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1440
>gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Japonica Group]
gi|19881702|gb|AAM01103.1|AC098682_7 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431123|gb|AAP52945.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1777
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1300 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWMGERLCVPDDKELKDLILTEAHQTQYSI 1358
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1359 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1389
>gb|AAM08795.1|AC090486_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431148|gb|AAP52970.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1785
Score = 103 bits (257), Expect = 2e-20
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +1
Query: 40 QKNNKEFQEFKNRVEAKKLEDFRTLEAYGSLYFQNRLCVPNDTELKCKILEESHKSKYSM 219
Q N+ E E K + K DF E +G+++ RLCVP+D ELK IL E+H+++YS+
Sbjct: 1308 QVNDSEIAELKKNMRVGKARDFHEDE-HGTIWMGERLCVPDDKELKDLILTEAHQTQYSI 1366
Query: 220 HPGEDKMYKDLKQKFWWTGMKREIAEYVAVC 312
HPG KMY+DLK+KFWW M+REIAE+VA+C
Sbjct: 1367 HPGSTKMYQDLKEKFWWVSMRREIAEFVALC 1397