BLASTX nr result

ID: Catharanthus23_contig00030549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030549
         (318 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB86684.1| Formin-like protein 6 [Morus notabilis]                 58   1e-06
ref|XP_002515431.1| DNA binding protein, putative [Ricinus commu...    57   3e-06
ref|XP_006601685.1| PREDICTED: formin-like protein 18-like [Glyc...    55   9e-06

>gb|EXB86684.1| Formin-like protein 6 [Morus notabilis]
          Length = 1221

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
 Frame = -1

Query: 222  TSKLSQHGPPVPPPLAP------FSNATSQNH-----SASXXXXXXXXXXXXXGSKGKLL 76
            +SK   + PPVPPP AP       ++ TSQ       + +              SKG+ L
Sbjct: 776  SSKKPANAPPVPPPPAPPIHGASKASLTSQQSCSAVSNGNVPSIPGPPSGVLLSSKGRGL 835

Query: 75   LRSAPKNQSQTKKSSLKPYHWLKLT 1
             R  P+NQ+Q KKS+LKPYHWLKLT
Sbjct: 836  SRMTPRNQAQPKKSNLKPYHWLKLT 860


>ref|XP_002515431.1| DNA binding protein, putative [Ricinus communis]
            gi|223545375|gb|EEF46880.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1266

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
 Frame = -1

Query: 210  SQHGPPVPPPLAPFSNATSQNHSASXXXXXXXXXXXXXG-----------SKGKLLLRSA 64
            S H PPVPPP AP +   S+    S                         +KG+ L RS+
Sbjct: 780  SAHIPPVPPPPAPCAKGLSKPGGTSSPSHNGVVNGNVPPVPGPPSGALFSAKGRGLSRSS 839

Query: 63   PKNQSQTKKSSLKPYHWLKLT 1
            P+NQ+Q +K++LKPYHWLK+T
Sbjct: 840  PRNQAQPRKANLKPYHWLKIT 860


>ref|XP_006601685.1| PREDICTED: formin-like protein 18-like [Glycine max]
          Length = 1466

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -1

Query: 219  SKLSQHGPPVPPPLAPFSNATSQNHSASXXXXXXXXXXXXXGSKGK-LLLRSAPKNQSQT 43
            SK S + PP PPPLA  +N  S+                  G+KG+  LLR+ PK QSQT
Sbjct: 998  SKNSANVPPPPPPLA--ANGLSK-------PAVPGPPSAPFGAKGRGSLLRANPKGQSQT 1048

Query: 42   KKSSLKPYHWLKLT 1
            K+S+LKPYHWLKLT
Sbjct: 1049 KRSNLKPYHWLKLT 1062


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